Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:50:27 (29728): wrapper (7.7.26015): starting
23:50:27 (29728): wrapper: running run_atlas (--nthreads 12)
[2026-03-09 23:50:27] Arguments: --nthreads 12
[2026-03-09 23:50:27] Threads: 12
[2026-03-09 23:50:27] Checking for CVMFS
[2026-03-09 23:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 23:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 23:50:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 23:50:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 23:50:28] 2.11.2.0 2979 436938 100196 157100 1 50 16316966 20275201 1 130560 1 187228564 99.957 24369748 17345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 23:50:28] CVMFS is ok
[2026-03-09 23:50:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 23:50:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 23:50:28] Further information can be found at the LHC@home message board.
[2026-03-09 23:50:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 23:50:28] Checking for apptainer binary...
[2026-03-09 23:50:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 23:50:28] Running /usr/bin/apptainer --version
[2026-03-09 23:50:28] apptainer version 1.3.2-1.el7
[2026-03-09 23:50:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 23:50:29] c-205-21.aglt2.org
[2026-03-09 23:50:29] apptainer works
[2026-03-09 23:50:29] Set ATHENA_PROC_NUMBER=12
[2026-03-09 23:50:29] Set ATHENA_CORE_NUMBER=12
[2026-03-09 23:50:29] Starting ATLAS job with PandaID=7035716070
[2026-03-09 23:50:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 01:16:14]  *** The last 200 lines of the pilot log: ***
[2026-03-10 01:16:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 01:16:14]  is_altstaged=None
[2026-03-10 01:16:14]  is_tar=False
[2026-03-10 01:16:14]  lfn=log.48838416._009859.job.log.tgz.1
[2026-03-10 01:16:14]  mtime=0
[2026-03-10 01:16:14]  protocol_id=None
[2026-03-10 01:16:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 01:16:14]  replicas=None
[2026-03-10 01:16:14]  scope=mc23_13p6TeV
[2026-03-10 01:16:14]  status=None
[2026-03-10 01:16:14]  status_code=0
[2026-03-10 01:16:14]  storage_token=
[2026-03-10 01:16:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7035716070/log.48838416._009859.job.log.tgz.1
[2026-03-10 01:16:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/6e/log.48838416._009859.job.log.tgz.1
[2026-03-10 01:16:14]  workdir=None
[2026-03-10 01:16:14] ]
[2026-03-10 01:16:14] 2026-03-10 05:15:35,481 | INFO     | transferring file log.48838416._009859.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7035716070/log.48838416._009859.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-10 01:16:14] 2026-03-10 05:15:35,481 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7035716070/log.48838416._009859.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838416._009859.job
[2026-03-10 01:16:14] 2026-03-10 05:15:35,504 | INFO     | adding to output.list: log.48838416._009859.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/6e/log.48838416._009859.job.log.tg
[2026-03-10 01:16:14] 2026-03-10 05:15:35,505 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 01:16:14] 2026-03-10 05:15:35,505 | INFO     | summary of transferred files:
[2026-03-10 01:16:14] 2026-03-10 05:15:35,505 | INFO     |  -- lfn=log.48838416._009859.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 01:16:14] 2026-03-10 05:15:35,506 | INFO     | stage-out finished correctly
[2026-03-10 01:16:14] 2026-03-10 05:15:36,325 | INFO     | PID=965 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-10 01:16:14] 2026-03-10 05:15:36,919 | INFO     | monitor loop #385: job 0:7035716070 is in state 'finished'
[2026-03-10 01:16:14] 2026-03-10 05:15:36,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 01:16:14] 2026-03-10 05:15:37,325 | INFO     | time since job start (5088s) is within the limit (349056.0s)
[2026-03-10 01:16:14] 2026-03-10 05:15:38,881 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 01:16:14] 2026-03-10 05:15:39,331 | INFO     | time since job start (5090s) is within the limit (349056.0s)
[2026-03-10 01:16:14] 2026-03-10 05:15:39,427 | INFO     | monitor loop #386: job 0:7035716070 is in state 'finished'
[2026-03-10 01:16:14] 2026-03-10 05:15:39,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,352 | INFO     | time since job start (5092s) is within the limit (349056.0s)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,590 | INFO     | job 7035716070 has state=finished
[2026-03-10 01:16:14] 2026-03-10 05:15:41,590 | INFO     | preparing for final server update for job 7035716070 in state='finished'
[2026-03-10 01:16:14] 2026-03-10 05:15:41,591 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7035716070/jobReport.json
[2026-03-10 01:16:14] 2026-03-10 05:15:41,594 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-10 01:16:14] 2026-03-10 05:15:41,595 | INFO     | this job has now completed (state=finished)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,595 | INFO     | log transfer has been attempted: DONE
[2026-03-10 01:16:14] 2026-03-10 05:15:41,595 | INFO     | job 7035716070 has finished - writing final server update
[2026-03-10 01:16:14] 2026-03-10 05:15:41,595 | INFO     | total number of processed events: 400 (read)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,598 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7035716070/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,599 | INFO     | extracted standard info from prmon json
[2026-03-10 01:16:14] 2026-03-10 05:15:41,599 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 01:16:14] 2026-03-10 05:15:41,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 01:16:14] 2026-03-10 05:15:41,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 01:16:14] 2026-03-10 05:15:41,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 01:16:14] 2026-03-10 05:15:41,601 | INFO     | fitting pss+swap vs Time
[2026-03-10 01:16:14] 2026-03-10 05:15:41,602 | INFO     | sum of square deviations: 136095575.0
[2026-03-10 01:16:14] 2026-03-10 05:15:41,602 | INFO     | sum of deviations: -7898522292.000001
[2026-03-10 01:16:14] 2026-03-10 05:15:41,602 | INFO     | mean x: 1773117265.5
[2026-03-10 01:16:14] 2026-03-10 05:15:41,602 | INFO     | mean y: 2787203.6315789474
[2026-03-10 01:16:14] 2026-03-10 05:15:41,602 | INFO     | intersect: 102908456604.57892
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | chi2: 0.06938486086685342
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | current memory leak: -58.04 B/s (using 76 data points, chi2=0.07)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | ..............................
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | . Timing measurements:
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | . get job = 0 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,603 | INFO     | . initial setup = 7 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,604 | INFO     | . payload setup = 7 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,604 | INFO     | . stage-in = 0 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,604 | INFO     | . payload execution = 5063 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,604 | INFO     | . stage-out = 0 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,604 | INFO     | . log creation = 0 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,604 | INFO     | ..............................
[2026-03-10 01:16:14] 2026-03-10 05:15:41,680 | INFO     | 
[2026-03-10 01:16:14] 2026-03-10 05:15:41,680 | INFO     | job summary report
[2026-03-10 01:16:14] 2026-03-10 05:15:41,680 | INFO     | --------------------------------------------------
[2026-03-10 01:16:14] 2026-03-10 05:15:41,681 | INFO     | PanDA job id: 7035716070
[2026-03-10 01:16:14] 2026-03-10 05:15:41,681 | INFO     | task id: 48838416
[2026-03-10 01:16:14] 2026-03-10 05:15:41,681 | INFO     | errors: (none)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,681 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 01:16:14] 2026-03-10 05:15:41,681 | INFO     | pilot state: finished 
[2026-03-10 01:16:14] 2026-03-10 05:15:41,682 | INFO     | transexitcode: 0
[2026-03-10 01:16:14] 2026-03-10 05:15:41,682 | INFO     | exeerrorcode: 0
[2026-03-10 01:16:14] 2026-03-10 05:15:41,682 | INFO     | exeerrordiag: 
[2026-03-10 01:16:14] 2026-03-10 05:15:41,682 | INFO     | exitcode: 0
[2026-03-10 01:16:14] 2026-03-10 05:15:41,682 | INFO     | exitmsg: OK
[2026-03-10 01:16:14] 2026-03-10 05:15:41,682 | INFO     | cpuconsumptiontime: 55151 s
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | nevents: 400
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | neventsw: 0
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | pid: 5565
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | pgrp: 5565
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | corecount: 12
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | event service: False
[2026-03-10 01:16:14] 2026-03-10 05:15:41,683 | INFO     | sizes: {0: 2280240, 11: 2280240, 5074: 2306569, 5075: 2315567, 5078: 2315623, 5081: 2315817}
[2026-03-10 01:16:14] 2026-03-10 05:15:41,684 | INFO     | --------------------------------------------------
[2026-03-10 01:16:14] 2026-03-10 05:15:41,684 | INFO     | 
[2026-03-10 01:16:14] 2026-03-10 05:15:41,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-10 01:16:14] 2026-03-10 05:15:41,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,710 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 01:16:14] 2026-03-10 05:15:41,713 | INFO     | job 7035716070 has completed (purged errors)
[2026-03-10 01:16:14] 2026-03-10 05:15:41,714 | INFO     | overall cleanup function is called
[2026-03-10 01:16:14] 2026-03-10 05:15:42,722 | INFO     | --- collectZombieJob: --- 10, [5565]
[2026-03-10 01:16:14] 2026-03-10 05:15:42,722 | INFO     | zombie collector waiting for pid 5565
[2026-03-10 01:16:14] 2026-03-10 05:15:42,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 01:16:14] 2026-03-10 05:15:42,723 | INFO     | collected zombie processes
[2026-03-10 01:16:14] 2026-03-10 05:15:42,723 | INFO     | will attempt to kill all subprocesses of pid=5565
[2026-03-10 01:16:14] 2026-03-10 05:15:42,811 | INFO     | process IDs to be killed: [5565] (in reverse order)
[2026-03-10 01:16:14] 2026-03-10 05:15:42,861 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 01:16:14] 2026-03-10 05:15:42,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 01:16:14] 2026-03-10 05:15:42,865 | INFO     | did not find any defunct processes belonging to 5565
[2026-03-10 01:16:14] 2026-03-10 05:15:42,869 | INFO     | did not find any defunct processes belonging to 5565
[2026-03-10 01:16:14] 2026-03-10 05:15:42,869 | INFO     | ready for new job
[2026-03-10 01:16:14] 2026-03-10 05:15:42,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 01:16:14] 2026-03-10 05:15:42,871 | INFO     | **************************************
[2026-03-10 01:16:14] 2026-03-10 05:15:42,871 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 01:16:14] 2026-03-10 05:15:42,871 | INFO     | **************************************
[2026-03-10 01:16:14] 2026-03-10 05:15:42,871 | INFO     | 
[2026-03-10 01:16:14] 2026-03-10 05:15:42,871 | INFO     | architecture information:
[2026-03-10 01:16:14] 2026-03-10 05:15:42,872 | INFO     | executing command: cat /etc/os-release
[2026-03-10 01:16:14] 2026-03-10 05:15:42,888 | INFO     | cat /etc/os-release:
[2026-03-10 01:16:14] NAME="CentOS Linux"
[2026-03-10 01:16:14] VERSION="7 (Core)"
[2026-03-10 01:16:14] ID="centos"
[2026-03-10 01:16:14] ID_LIKE="rhel fedora"
[2026-03-10 01:16:14] VERSION_ID="7"
[2026-03-10 01:16:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 01:16:14] ANSI_COLOR="0;31"
[2026-03-10 01:16:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 01:16:14] HOME_URL="https://www.centos.org/"
[2026-03-10 01:16:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 01:16:14] 
[2026-03-10 01:16:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 01:16:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 01:16:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 01:16:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 01:16:14] 
[2026-03-10 01:16:14] 2026-03-10 05:15:42,889 | INFO     | **************************************
[2026-03-10 01:16:14] 2026-03-10 05:15:43,392 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-10 01:16:14] 2026-03-10 05:15:43,409 | INFO     | sufficient remaining disk space (29162995712 B)
[2026-03-10 01:16:14] 2026-03-10 05:15:43,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 01:16:14] 2026-03-10 05:15:43,410 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 01:16:14] 2026-03-10 05:15:43,410 | INFO     | update_server=False
[2026-03-10 01:16:14] 2026-03-10 05:15:43,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 01:16:14] 2026-03-10 05:15:43,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:16:14] 2026-03-10 05:15:43,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 01:16:14] 2026-03-10 05:15:43,411 | INFO     | aborting loop
[2026-03-10 01:16:14] 2026-03-10 05:15:43,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 01:16:14] 2026-03-10 05:15:43,721 | INFO     | all data control threads have been joined
[2026-03-10 01:16:14] 2026-03-10 05:15:44,416 | INFO     | [job] retrieve thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,416 | INFO     | [job] queue monitor thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,417 | INFO     | [job] job monitor thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,429 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,653 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,693 | INFO     | all payload control threads have been joined
[2026-03-10 01:16:14] 2026-03-10 05:15:44,727 | INFO     | [data] control thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,736 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,761 | INFO     | [data] copytool_in thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:44,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 01:16:14] 2026-03-10 05:15:45,038 | INFO     | all job control threads have been joined
[2026-03-10 01:16:14] 2026-03-10 05:15:45,333 | INFO     | [payload] validate_post thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:45,389 | INFO     | [payload] failed_post thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:45,495 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:45,521 | INFO     | [job] validate thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:45,603 | INFO     | [data] copytool_out thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:45,699 | INFO     | [payload] control thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:46,044 | INFO     | [job] control thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:48,972 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 01:16:14] 2026-03-10 05:15:56,940 | INFO     | [monitor] cgroup control has ended
[2026-03-10 01:16:14] 2026-03-10 05:15:57,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370333857600)>', '<ExcThread(monitor, started 140369446557440)>']
[2026-03-10 01:16:14] 2026-03-10 05:16:02,355 | INFO     | all workflow threads have been joined
[2026-03-10 01:16:14] 2026-03-10 05:16:02,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 01:16:14] 2026-03-10 05:16:02,362 | INFO     | traces error code: 0
[2026-03-10 01:16:14] 2026-03-10 05:16:02,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 01:16:14] 2026-03-10 05:16:14,611 | INFO     | PID=965 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-10 01:16:14] 2026-03-10 05:16:14,613 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 01:16:14] 2026-03-10 05:16:14,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 01:16:14] 2026-03-10 05:16:14,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 01:16:14] 2026-03-10 05:16:14,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 01:16:14] 2026-03-10 05:16:14,613 | INFO     | [monitor] control thread has ended
[2026-03-10 01:16:14] 2026-03-10 05:16:14,714 [wrapper] ==== pilot stdout END ====
[2026-03-10 01:16:14] 2026-03-10 05:16:14,718 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 01:16:14] 2026-03-10 05:16:14,722 [wrapper] pilotpid: 965
[2026-03-10 01:16:14] 2026-03-10 05:16:14,726 [wrapper] Pilot exit status: 0
[2026-03-10 01:16:14] 2026-03-10 05:16:14,741 [wrapper] pandaids: 7035716070
[2026-03-10 01:16:14] 2026-03-10 05:16:14,791 [wrapper] cleanup supervisor_pilot 27759 966
[2026-03-10 01:16:14] 2026-03-10 05:16:14,795 [wrapper] Test setup, not cleaning
[2026-03-10 01:16:14] 2026-03-10 05:16:14,799 [wrapper] apfmon messages muted
[2026-03-10 01:16:14] 2026-03-10 05:16:14,803 [wrapper] ==== wrapper stdout END ====
[2026-03-10 01:16:14] 2026-03-10 05:16:14,807 [wrapper] ==== wrapper stderr END ====
[2026-03-10 01:16:14]  *** Error codes and diagnostics ***
[2026-03-10 01:16:14]     "exeErrorCode": 0,
[2026-03-10 01:16:14]     "exeErrorDiag": "",
[2026-03-10 01:16:14]     "pilotErrorCode": 0,
[2026-03-10 01:16:14]     "pilotErrorDiag": "",
[2026-03-10 01:16:14]  *** Listing of results directory ***
[2026-03-10 01:16:14] total 508044
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas    584627 Mar  1 18:37 pilot3.tar.gz
[2026-03-10 01:16:14] -rwx------ 1 boincer umatlas     36322 Mar  1 18:40 runpilot2-wrapper.sh
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas      5111 Mar  1 18:41 queuedata.json
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas       100 Mar  9 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 01:16:14] -rwxr-xr-x 1 boincer umatlas      7986 Mar  9 23:50 run_atlas
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas       105 Mar  9 23:50 job.xml
[2026-03-10 01:16:14] -rw-r--r-- 2 boincer umatlas 289136279 Mar  9 23:50 EVNT.48220085._000384.pool.root.1
[2026-03-10 01:16:14] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 23:50 start_atlas.sh
[2026-03-10 01:16:14] drwxrwx--x 2 boincer umatlas      4096 Mar  9 23:50 shared
[2026-03-10 01:16:14] -rw-r--r-- 2 boincer umatlas    597959 Mar  9 23:50 input.tar.gz
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas         0 Mar  9 23:50 boinc_lockfile
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas      2567 Mar  9 23:50 pandaJob.out
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas        57 Mar  9 23:50 setup.sh.local
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas   1006495 Mar  9 23:50 agis_schedconf.cvmfs.json
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas   1511578 Mar  9 23:50 agis_ddmendpoints.agis.ALL.json
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas       434 Mar  9 23:50 workernode_map.json
[2026-03-10 01:16:14] drwx------ 5 boincer umatlas      4096 Mar  9 23:50 pilot3
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas      5953 Mar 10 01:09 init_data.xml
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas 224920878 Mar 10 01:15 HITS.48838416._009859.pool.root.1
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas       529 Mar 10 01:15 boinc_task_state.xml
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas      1045 Mar 10 01:15 memory_monitor_summary.json
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas    389884 Mar 10 01:15 log.48838416._009859.job.log.tgz.1
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas      6410 Mar 10 01:15 heartbeat.json
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas        27 Mar 10 01:15 wrapper_checkpoint.txt
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas        95 Mar 10 01:16 pilot_heartbeat.json
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas       743 Mar 10 01:16 pilotlog.txt
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas      8192 Mar 10 01:16 boinc_mmap_file
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas    733507 Mar 10 01:16 log.48838416._009859.job.log.1
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas       357 Mar 10 01:16 output.list
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas       620 Mar 10 01:16 runtime_log
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas   1136640 Mar 10 01:16 result.tar.gz
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas      9343 Mar 10 01:16 runtime_log.err
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas       659 Mar 10 01:16 Op5LDmdZ5G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmU0BLDmh6KQhn.diag
[2026-03-10 01:16:14] -rw-r--r-- 1 boincer umatlas     21543 Mar 10 01:16 stderr.txt
[2026-03-10 01:16:14] HITS file was successfully produced:
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas 224920878 Mar 10 01:15 shared/HITS.pool.root.1
[2026-03-10 01:16:14]  *** Contents of shared directory: ***
[2026-03-10 01:16:14] total 503728
[2026-03-10 01:16:14] -rw-r--r-- 2 boincer umatlas 289136279 Mar  9 23:50 ATLAS.root_0
[2026-03-10 01:16:14] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 23:50 start_atlas.sh
[2026-03-10 01:16:14] -rw-r--r-- 2 boincer umatlas    597959 Mar  9 23:50 input.tar.gz
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas 224920878 Mar 10 01:15 HITS.pool.root.1
[2026-03-10 01:16:14] -rw------- 1 boincer umatlas   1136640 Mar 10 01:16 result.tar.gz
01:16:16 (29728): run_atlas exited; CPU time 55133.329336
01:16:16 (29728): called boinc_finish(0)

</stderr_txt>
]]>

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