Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:00 (2176712): wrapper (7.7.26015): starting
17:39:00 (2176712): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 17:39:00] Arguments: --nthreads 4
[2026-03-14 17:39:00] Threads: 4
[2026-03-14 17:39:00] Checking for CVMFS
[2026-03-14 17:39:00] No cvmfs_config command found, will try listing directly
[2026-03-14 17:39:00] CVMFS is ok
[2026-03-14 17:39:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 17:39:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 17:39:00] Further information can be found at the LHC@home message board.
[2026-03-14 17:39:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 17:39:00] Checking for apptainer binary...
[2026-03-14 17:39:00] which: no apptainer in ((null))
[2026-03-14 17:39:00] apptainer is not installed, using version from CVMFS
[2026-03-14 17:39:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 17:39:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-14 17:39:01] apptainer works
[2026-03-14 17:39:01] Set ATHENA_PROC_NUMBER=4
[2026-03-14 17:39:01] Set ATHENA_CORE_NUMBER=4
[2026-03-14 17:39:01] Starting ATLAS job with PandaID=7047808261
[2026-03-14 17:39:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 19:18:14]  *** The last 200 lines of the pilot log: ***
[2026-03-14 19:18:14]  filesize=267192
[2026-03-14 19:18:14]  filetype=log
[2026-03-14 19:18:14]  guid=e4431464-f249-409c-990a-818b2377f158
[2026-03-14 19:18:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 19:18:14]  is_altstaged=None
[2026-03-14 19:18:14]  is_tar=False
[2026-03-14 19:18:14]  lfn=log.48958593._000918.job.log.tgz.1
[2026-03-14 19:18:14]  mtime=0
[2026-03-14 19:18:14]  protocol_id=None
[2026-03-14 19:18:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 19:18:14]  replicas=None
[2026-03-14 19:18:14]  scope=mc23_13p6TeV
[2026-03-14 19:18:14]  status=None
[2026-03-14 19:18:14]  status_code=0
[2026-03-14 19:18:14]  storage_token=
[2026-03-14 19:18:14]  surl=/var/lib/boinc/var/slot52/slots/12/PanDA_Pilot-7047808261/log.48958593._000918.job.log.tgz.1
[2026-03-14 19:18:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/2a/log.48958593._000918.job.log.tgz.1
[2026-03-14 19:18:14]  workdir=None
[2026-03-14 19:18:14] ]
[2026-03-14 19:18:14] 2026-03-14 18:17:17,127 | INFO     | transferring file log.48958593._000918.job.log.tgz.1 from /var/lib/boinc/var/slot52/slots/12/PanDA_Pilot-7047808261/log.48958593._000918.job.log.tgz.1 to /var/lib/
[2026-03-14 19:18:14] 2026-03-14 18:17:17,127 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot52/slots/12/PanDA_Pilot-7047808261/log.48958593._000918.job.log.tgz.1 /var/lib/boinc/var/slot52/slots/12/
[2026-03-14 19:18:14] 2026-03-14 18:17:17,143 | INFO     | adding to output.list: log.48958593._000918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/2a/log.48958593._000918.job.log.tg
[2026-03-14 19:18:14] 2026-03-14 18:17:17,144 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 19:18:14] 2026-03-14 18:17:17,144 | INFO     | summary of transferred files:
[2026-03-14 19:18:14] 2026-03-14 18:17:17,144 | INFO     |  -- lfn=log.48958593._000918.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 19:18:14] 2026-03-14 18:17:17,144 | INFO     | stage-out finished correctly
[2026-03-14 19:18:14] 2026-03-14 18:17:17,556 | INFO     | monitor loop #405: job 0:7047808261 is in state 'finished'
[2026-03-14 19:18:14] 2026-03-14 18:17:17,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 19:18:14] 2026-03-14 18:17:17,775 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 19:18:14] 2026-03-14 18:17:18,531 | INFO     | time since job start (5839s) is within the limit (349056.0s)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,799 | INFO     | job 7047808261 has state=finished
[2026-03-14 19:18:14] 2026-03-14 18:17:18,799 | INFO     | preparing for final server update for job 7047808261 in state='finished'
[2026-03-14 19:18:14] 2026-03-14 18:17:18,799 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/12/PanDA_Pilot-7047808261/jobReport.json
[2026-03-14 19:18:14] 2026-03-14 18:17:18,801 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/12/workernode_map.json
[2026-03-14 19:18:14] 2026-03-14 18:17:18,801 | INFO     | this job has now completed (state=finished)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,801 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,801 | INFO     | log transfer has been attempted: DONE
[2026-03-14 19:18:14] 2026-03-14 18:17:18,801 | INFO     | job 7047808261 has finished - writing final server update
[2026-03-14 19:18:14] 2026-03-14 18:17:18,801 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2061879/.job.ad'
[2026-03-14 19:18:14] 2026-03-14 18:17:18,802 | INFO     | total number of processed events: 400 (read)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,820 | INFO     | using path: /var/lib/boinc/var/slot52/slots/12/PanDA_Pilot-7047808261/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,821 | INFO     | extracted standard info from prmon json
[2026-03-14 19:18:14] 2026-03-14 18:17:18,821 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 19:18:14] 2026-03-14 18:17:18,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 19:18:14] 2026-03-14 18:17:18,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 19:18:14] 2026-03-14 18:17:18,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 19:18:14] 2026-03-14 18:17:18,822 | INFO     | fitting pss+swap vs Time
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | sum of square deviations: 211285822.0
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | sum of deviations: -45070094.0
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | mean x: 1773509401.5
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | mean y: 2353529.0454545454
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | intersect: 380666823.70414084
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | chi2: 0.0009146201003097468
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | current memory leak: -0.21 B/s (using 88 data points, chi2=0.00)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | could have reported an average CPU frequency of 3514 MHz (7 samples)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | ..............................
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | . Timing measurements:
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | . get job = 0 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,823 | INFO     | . initial setup = 22 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,824 | INFO     | . payload setup = 24 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,824 | INFO     | . stage-in = 0 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,824 | INFO     | . payload execution = 5808 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,824 | INFO     | . stage-out = 0 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,824 | INFO     | . log creation = 0 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,824 | INFO     | ..............................
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | 
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | job summary report
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | --------------------------------------------------
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | PanDA job id: 7047808261
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | task id: 48958593
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | errors: (none)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | pilot state: finished 
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | transexitcode: 0
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | exeerrorcode: 0
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | exeerrordiag: 
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | exitcode: 0
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | exitmsg: OK
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | cpuconsumptiontime: 21252 s
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | nevents: 400
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | neventsw: 0
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | pid: 2208859
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | pgrp: 2208859
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | corecount: 4
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | event service: False
[2026-03-14 19:18:14] 2026-03-14 18:17:18,876 | INFO     | sizes: {0: 2280075, 1: 2280309, 5836: 2306995, 5837: 2316017, 5838: 2316073, 5839: 2316267}
[2026-03-14 19:18:14] 2026-03-14 18:17:18,877 | INFO     | --------------------------------------------------
[2026-03-14 19:18:14] 2026-03-14 18:17:18,877 | INFO     | 
[2026-03-14 19:18:14] 2026-03-14 18:17:18,877 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/12
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | job 7047808261 has completed (purged errors)
[2026-03-14 19:18:14] 2026-03-14 18:17:18,894 | INFO     | overall cleanup function is called
[2026-03-14 19:18:14] 2026-03-14 18:17:19,901 | INFO     | --- collectZombieJob: --- 10, [2208859]
[2026-03-14 19:18:14] 2026-03-14 18:17:19,901 | INFO     | zombie collector waiting for pid 2208859
[2026-03-14 19:18:14] 2026-03-14 18:17:19,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 19:18:14] 2026-03-14 18:17:19,901 | INFO     | collected zombie processes
[2026-03-14 19:18:14] 2026-03-14 18:17:19,901 | INFO     | will attempt to kill all subprocesses of pid=2208859
[2026-03-14 19:18:14] 2026-03-14 18:17:20,394 | INFO     | process IDs to be killed: [2208859] (in reverse order)
[2026-03-14 19:18:14] 2026-03-14 18:17:20,625 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 19:18:14] 2026-03-14 18:17:20,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 19:18:14] 2026-03-14 18:17:20,655 | INFO     | did not find any defunct processes belonging to 2208859
[2026-03-14 19:18:14] 2026-03-14 18:17:20,682 | INFO     | did not find any defunct processes belonging to 2208859
[2026-03-14 19:18:14] 2026-03-14 18:17:20,682 | INFO     | ready for new job
[2026-03-14 19:18:14] 2026-03-14 18:17:20,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 19:18:14] 2026-03-14 18:17:20,684 | INFO     | **************************************
[2026-03-14 19:18:14] 2026-03-14 18:17:20,684 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 19:18:14] 2026-03-14 18:17:20,684 | INFO     | **************************************
[2026-03-14 19:18:14] 2026-03-14 18:17:20,684 | INFO     | 
[2026-03-14 19:18:14] 2026-03-14 18:17:20,689 | INFO     | architecture information:
[2026-03-14 19:18:14] 2026-03-14 18:17:20,689 | INFO     | executing command: cat /etc/os-release
[2026-03-14 19:18:14] 2026-03-14 18:17:20,701 | INFO     | cat /etc/os-release:
[2026-03-14 19:18:14] NAME="CentOS Linux"
[2026-03-14 19:18:14] VERSION="7 (Core)"
[2026-03-14 19:18:14] ID="centos"
[2026-03-14 19:18:14] ID_LIKE="rhel fedora"
[2026-03-14 19:18:14] VERSION_ID="7"
[2026-03-14 19:18:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 19:18:14] ANSI_COLOR="0;31"
[2026-03-14 19:18:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 19:18:14] HOME_URL="https://www.centos.org/"
[2026-03-14 19:18:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 19:18:14] 
[2026-03-14 19:18:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 19:18:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 19:18:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 19:18:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 19:18:14] 
[2026-03-14 19:18:14] 2026-03-14 18:17:20,702 | INFO     | **************************************
[2026-03-14 19:18:14] 2026-03-14 18:17:21,204 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/12
[2026-03-14 19:18:14] 2026-03-14 18:17:21,223 | INFO     | sufficient remaining disk space (19656605696 B)
[2026-03-14 19:18:14] 2026-03-14 18:17:21,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 19:18:14] 2026-03-14 18:17:21,224 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 19:18:14] 2026-03-14 18:17:21,224 | INFO     | update_server=False
[2026-03-14 19:18:14] 2026-03-14 18:17:21,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 19:18:14] 2026-03-14 18:17:21,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:18:14] 2026-03-14 18:17:21,224 | INFO     | aborting loop
[2026-03-14 19:18:14] 2026-03-14 18:17:21,735 | INFO     | all data control threads have been joined
[2026-03-14 19:18:14] 2026-03-14 18:17:21,852 | INFO     | all job control threads have been joined
[2026-03-14 19:18:14] 2026-03-14 18:17:22,229 | INFO     | [job] retrieve thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:22,229 | INFO     | [job] job monitor thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:22,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:22,338 | INFO     | all payload control threads have been joined
[2026-03-14 19:18:14] 2026-03-14 18:17:22,444 | INFO     | [payload] validate_post thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:22,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 19:18:14] 2026-03-14 18:17:22,740 | INFO     | [data] control thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:22,857 | INFO     | [job] control thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:22,946 | INFO     | [job] validate thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,124 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,317 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,339 | INFO     | [payload] failed_post thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,344 | INFO     | [payload] control thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,387 | INFO     | [data] copytool_in thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,596 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:23,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 19:18:14] 2026-03-14 18:17:23,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:18:14] 2026-03-14 18:17:24,710 | INFO     | [data] copytool_out thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:24,890 | INFO     | [job] queue monitor thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:27,836 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 19:18:14] 2026-03-14 18:17:52,240 | INFO     | PID=2187119 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 19:18:14] 2026-03-14 18:17:52,240 | INFO     | .. there are 51 such processes running
[2026-03-14 19:18:14] 2026-03-14 18:17:52,241 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 19:18:14] 2026-03-14 18:17:52,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 19:18:14] 2026-03-14 18:17:52,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 19:18:14] 2026-03-14 18:18:08,302 | INFO     | [monitor] cgroup control has ended
[2026-03-14 19:18:14] 2026-03-14 18:18:08,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23393333274432)>', '<ExcThread(monitor, started 23393096451840)>']
[2026-03-14 19:18:14] 2026-03-14 18:18:09,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 19:18:14] 2026-03-14 18:18:09,327 | INFO     | [monitor] control thread has ended
[2026-03-14 19:18:14] 2026-03-14 18:18:13,792 | INFO     | all workflow threads have been joined
[2026-03-14 19:18:14] 2026-03-14 18:18:13,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 19:18:14] 2026-03-14 18:18:13,792 | INFO     | traces error code: 0
[2026-03-14 19:18:14] 2026-03-14 18:18:13,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 19:18:14] 2026-03-14 18:18:13,920 [wrapper] ==== pilot stdout END ====
[2026-03-14 19:18:14] 2026-03-14 18:18:13,923 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 19:18:14] 2026-03-14 18:18:13,925 [wrapper] pilotpid: 2187119
[2026-03-14 19:18:14] 2026-03-14 18:18:13,927 [wrapper] Pilot exit status: 0
[2026-03-14 19:18:14] 2026-03-14 18:18:13,936 [wrapper] pandaids: 7047808261
[2026-03-14 19:18:14] 2026-03-14 18:18:14,071 [wrapper] cleanup supervisor_pilot 3066204 2187120
[2026-03-14 19:18:14] 2026-03-14 18:18:14,074 [wrapper] Test setup, not cleaning
[2026-03-14 19:18:14] 2026-03-14 18:18:14,076 [wrapper] apfmon messages muted
[2026-03-14 19:18:14] 2026-03-14 18:18:14,078 [wrapper] ==== wrapper stdout END ====
[2026-03-14 19:18:14] 2026-03-14 18:18:14,080 [wrapper] ==== wrapper stderr END ====
[2026-03-14 19:18:14]  *** Error codes and diagnostics ***
[2026-03-14 19:18:14]     "exeErrorCode": 0,
[2026-03-14 19:18:14]     "exeErrorDiag": "",
[2026-03-14 19:18:14]     "pilotErrorCode": 0,
[2026-03-14 19:18:14]     "pilotErrorDiag": "",
[2026-03-14 19:18:14]  *** Listing of results directory ***
[2026-03-14 19:18:14] total 440916
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc    584627 Mar  9 23:47 pilot3.tar.gz
[2026-03-14 19:18:14] -rwx------. 1 boinc boinc     36322 Mar  9 23:47 runpilot2-wrapper.sh
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc      5111 Mar  9 23:47 queuedata.json
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc       100 Mar 14 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 19:18:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 17:38 run_atlas
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc       105 Mar 14 17:38 job.xml
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc      6706 Mar 14 17:39 init_data.xml
[2026-03-14 19:18:14] -rw-r--r--. 2 boinc boinc 261534559 Mar 14 17:39 EVNT.48958591._000036.pool.root.1
[2026-03-14 19:18:14] -rw-r--r--. 2 boinc boinc     15845 Mar 14 17:39 start_atlas.sh
[2026-03-14 19:18:14] drwxrwx--x. 2 boinc boinc      4096 Mar 14 17:39 shared
[2026-03-14 19:18:14] -rw-r--r--. 2 boinc boinc    597972 Mar 14 17:39 input.tar.gz
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc         0 Mar 14 17:39 boinc_lockfile
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc      2614 Mar 14 17:39 pandaJob.out
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc   1004579 Mar 14 17:39 agis_schedconf.cvmfs.json
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc   1511579 Mar 14 17:39 agis_ddmendpoints.agis.ALL.json
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc       444 Mar 14 17:39 workernode_map.json
[2026-03-14 19:18:14] drwx------. 5 boinc boinc      4096 Mar 14 17:39 pilot3
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc 183821443 Mar 14 19:16 HITS.48958593._000918.pool.root.1
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc       530 Mar 14 19:17 boinc_task_state.xml
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc      1031 Mar 14 19:17 memory_monitor_summary.json
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc        95 Mar 14 19:17 pilot_heartbeat.json
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc    267192 Mar 14 19:17 log.48958593._000918.job.log.tgz.1
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc      6343 Mar 14 19:17 heartbeat.json
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc      8192 Mar 14 19:18 boinc_mmap_file
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc        27 Mar 14 19:18 wrapper_checkpoint.txt
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc      4830 Mar 14 19:18 pilotlog.txt
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc    832153 Mar 14 19:18 log.48958593._000918.job.log.1
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc       357 Mar 14 19:18 output.list
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc       620 Mar 14 19:18 runtime_log
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc   1116160 Mar 14 19:18 result.tar.gz
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc      9221 Mar 14 19:18 runtime_log.err
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc       662 Mar 14 19:18 Lh3MDmGZyJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsvdLDmh0HmNn.diag
[2026-03-14 19:18:14] -rw-r--r--. 1 boinc boinc     20543 Mar 14 19:18 stderr.txt
[2026-03-14 19:18:14] HITS file was successfully produced:
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc 183821443 Mar 14 19:16 shared/HITS.pool.root.1
[2026-03-14 19:18:14]  *** Contents of shared directory: ***
[2026-03-14 19:18:14] total 436624
[2026-03-14 19:18:14] -rw-r--r--. 2 boinc boinc 261534559 Mar 14 17:39 ATLAS.root_0
[2026-03-14 19:18:14] -rw-r--r--. 2 boinc boinc     15845 Mar 14 17:39 start_atlas.sh
[2026-03-14 19:18:14] -rw-r--r--. 2 boinc boinc    597972 Mar 14 17:39 input.tar.gz
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc 183821443 Mar 14 19:16 HITS.pool.root.1
[2026-03-14 19:18:14] -rw-------. 1 boinc boinc   1116160 Mar 14 19:18 result.tar.gz
19:18:16 (2176712): run_atlas exited; CPU time 21519.421618
19:18:16 (2176712): called boinc_finish(0)

</stderr_txt>
]]>

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