Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:23:56 (1869498): wrapper (7.7.26015): starting
04:23:56 (1869498): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 04:23:56] Arguments: --nthreads 4
[2026-03-13 04:23:56] Threads: 4
[2026-03-13 04:23:56] Checking for CVMFS
[2026-03-13 04:23:56] No cvmfs_config command found, will try listing directly
[2026-03-13 04:23:56] CVMFS is ok
[2026-03-13 04:23:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 04:23:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 04:23:56] Further information can be found at the LHC@home message board.
[2026-03-13 04:23:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 04:23:56] Checking for apptainer binary...
[2026-03-13 04:23:56] which: no apptainer in ((null))
[2026-03-13 04:23:56] apptainer is not installed, using version from CVMFS
[2026-03-13 04:23:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 04:23:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-13 04:23:57] apptainer works
[2026-03-13 04:23:57] Set ATHENA_PROC_NUMBER=4
[2026-03-13 04:23:57] Set ATHENA_CORE_NUMBER=4
[2026-03-13 04:23:57] Starting ATLAS job with PandaID=7041787973
[2026-03-13 04:23:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 07:30:14]  *** The last 200 lines of the pilot log: ***
[2026-03-13 07:30:14] 2026-03-13 06:28:48,208 | INFO     | preparing for final server update for job 7041787973 in state='finished'
[2026-03-13 07:30:14] 2026-03-13 06:28:48,208 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/8/PanDA_Pilot-7041787973/jobReport.json
[2026-03-13 07:30:14] 2026-03-13 06:28:48,213 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/8/workernode_map.json
[2026-03-13 07:30:14] 2026-03-13 06:28:48,213 | INFO     | this job has now completed (state=finished)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,214 | INFO     | log transfer has been attempted: DONE
[2026-03-13 07:30:14] 2026-03-13 06:28:48,214 | INFO     | job 7041787973 has finished - writing final server update
[2026-03-13 07:30:14] 2026-03-13 06:28:48,215 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1382880/.job.ad'
[2026-03-13 07:30:14] 2026-03-13 06:28:48,215 | INFO     | total number of processed events: 400 (read)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,257 | INFO     | using path: /var/lib/boinc/var/slot52/slots/8/PanDA_Pilot-7041787973/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,257 | INFO     | extracted standard info from prmon json
[2026-03-13 07:30:14] 2026-03-13 06:28:48,258 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 07:30:14] 2026-03-13 06:28:48,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 07:30:14] 2026-03-13 06:28:48,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 07:30:14] 2026-03-13 06:28:48,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 07:30:14] 2026-03-13 06:28:48,264 | INFO     | fitting pss+swap vs Time
[2026-03-13 07:30:14] 2026-03-13 06:28:48,264 | INFO     | sum of square deviations: 1838657730.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,266 | INFO     | sum of deviations: -3279057135.000001
[2026-03-13 07:30:14] 2026-03-13 06:28:48,266 | INFO     | mean x: 1773377782.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,266 | INFO     | mean y: 2338612.364640884
[2026-03-13 07:30:14] 2026-03-13 06:28:48,266 | INFO     | intersect: 3164975667.776567
[2026-03-13 07:30:14] 2026-03-13 06:28:48,267 | INFO     | chi2: 1.3456931455258074
[2026-03-13 07:30:14] 2026-03-13 06:28:48,267 | INFO     | sum of square deviations: 1690450300.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,269 | INFO     | sum of deviations: -2983346550.500004
[2026-03-13 07:30:14] 2026-03-13 06:28:48,269 | INFO     | mean x: 1773377629.5
[2026-03-13 07:30:14] 2026-03-13 06:28:48,269 | INFO     | mean y: 2338916.710227273
[2026-03-13 07:30:14] 2026-03-13 06:28:48,269 | INFO     | intersect: 3132037573.750129
[2026-03-13 07:30:14] 2026-03-13 06:28:48,270 | INFO     | chi2: 1.345766132844314
[2026-03-13 07:30:14] 2026-03-13 06:28:48,270 | INFO     | current chi2=1.345766132844314 (change=-0.0054237712920845865 %)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,270 | INFO     | right removable region: 175
[2026-03-13 07:30:14] 2026-03-13 06:28:48,271 | INFO     | sum of square deviations: 1690450300.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,272 | INFO     | sum of deviations: -23868187878.5
[2026-03-13 07:30:14] 2026-03-13 06:28:48,272 | INFO     | mean x: 1773377934.5
[2026-03-13 07:30:14] 2026-03-13 06:28:48,273 | INFO     | mean y: 2359431.3806818184
[2026-03-13 07:30:14] 2026-03-13 06:28:48,273 | INFO     | intersect: 25041437906.64391
[2026-03-13 07:30:14] 2026-03-13 06:28:48,273 | INFO     | chi2: 0.05020423923725785
[2026-03-13 07:30:14] 2026-03-13 06:28:48,273 | INFO     | current chi2=0.05020423923725785 (change=96.2692654410719 %)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,274 | INFO     | sum of square deviations: 1550429070.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,275 | INFO     | sum of deviations: -20473728595.000004
[2026-03-13 07:30:14] 2026-03-13 06:28:48,275 | INFO     | mean x: 1773378087.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,275 | INFO     | mean y: 2355729.1988304094
[2026-03-13 07:30:14] 2026-03-13 06:28:48,275 | INFO     | intersect: 23420171063.09108
[2026-03-13 07:30:14] 2026-03-13 06:28:48,276 | INFO     | chi2: 0.04740053409888167
[2026-03-13 07:30:14] 2026-03-13 06:28:48,276 | INFO     | current chi2=0.04740053409888167 (change=5.584598394422997 %)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,276 | INFO     | left removable region: 20
[2026-03-13 07:30:14] 2026-03-13 06:28:48,276 | INFO     | sum of square deviations: 1154663510.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,278 | INFO     | sum of deviations: -11907677203.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,278 | INFO     | mean x: 1773378209.0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,278 | INFO     | mean y: 2346868.7225806452
[2026-03-13 07:30:14] 2026-03-13 06:28:48,278 | INFO     | intersect: 18290631800.84646
[2026-03-13 07:30:14] 2026-03-13 06:28:48,279 | INFO     | chi2: 0.028984894528669106
[2026-03-13 07:30:14] 2026-03-13 06:28:48,279 | INFO     | current memory leak: -10.31 B/s (using 155 data points, chi2=0.03)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,279 | INFO     | could have reported an average CPU frequency of 2680 MHz (10 samples)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | ..............................
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . Timing measurements:
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . get job = 0 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . initial setup = 9 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . payload setup = 10 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . stage-in = 0 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . payload execution = 11034 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,280 | INFO     | . stage-out = 1 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,281 | INFO     | . log creation = 0 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,281 | INFO     | ..............................
[2026-03-13 07:30:14] 2026-03-13 06:28:48,413 | INFO     | 
[2026-03-13 07:30:14] 2026-03-13 06:28:48,413 | INFO     | job summary report
[2026-03-13 07:30:14] 2026-03-13 06:28:48,413 | INFO     | --------------------------------------------------
[2026-03-13 07:30:14] 2026-03-13 06:28:48,413 | INFO     | PanDA job id: 7041787973
[2026-03-13 07:30:14] 2026-03-13 06:28:48,413 | INFO     | task id: 48955015
[2026-03-13 07:30:14] 2026-03-13 06:28:48,414 | INFO     | errors: (none)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,414 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 07:30:14] 2026-03-13 06:28:48,414 | INFO     | pilot state: finished 
[2026-03-13 07:30:14] 2026-03-13 06:28:48,414 | INFO     | transexitcode: 0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,414 | INFO     | exeerrorcode: 0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,418 | INFO     | exeerrordiag: 
[2026-03-13 07:30:14] 2026-03-13 06:28:48,418 | INFO     | exitcode: 0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,418 | INFO     | exitmsg: OK
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | cpuconsumptiontime: 42130 s
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | nevents: 400
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | neventsw: 0
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | pid: 1888205
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | pgrp: 1888205
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | corecount: 4
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | event service: False
[2026-03-13 07:30:14] 2026-03-13 06:28:48,419 | INFO     | sizes: {0: 2280247, 11: 2280247, 11048: 2309651, 11049: 2309650, 11051: 2318726, 11054: 2319104}
[2026-03-13 07:30:14] 2026-03-13 06:28:48,420 | INFO     | --------------------------------------------------
[2026-03-13 07:30:14] 2026-03-13 06:28:48,420 | INFO     | 
[2026-03-13 07:30:14] 2026-03-13 06:28:48,420 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/8
[2026-03-13 07:30:14] 2026-03-13 06:28:48,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 07:30:14] 2026-03-13 06:28:48,467 | INFO     | job 7041787973 has completed (purged errors)
[2026-03-13 07:30:14] 2026-03-13 06:28:48,467 | INFO     | overall cleanup function is called
[2026-03-13 07:30:14] 2026-03-13 06:28:49,480 | INFO     | --- collectZombieJob: --- 10, [1888205]
[2026-03-13 07:30:14] 2026-03-13 06:28:49,481 | INFO     | zombie collector waiting for pid 1888205
[2026-03-13 07:30:14] 2026-03-13 06:28:49,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 07:30:14] 2026-03-13 06:28:49,483 | INFO     | collected zombie processes
[2026-03-13 07:30:14] 2026-03-13 06:28:49,483 | INFO     | will attempt to kill all subprocesses of pid=1888205
[2026-03-13 07:30:14] 2026-03-13 06:28:50,104 | INFO     | PID=1877896 has CPU usage=31.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 07:30:14] 2026-03-13 06:28:50,104 | INFO     | .. there are 22 such processes running
[2026-03-13 07:30:14] 2026-03-13 06:28:50,990 | INFO     | process IDs to be killed: [1888205] (in reverse order)
[2026-03-13 07:30:14] 2026-03-13 06:28:51,427 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 07:30:14] 2026-03-13 06:28:51,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 07:30:14] 2026-03-13 06:28:51,469 | INFO     | did not find any defunct processes belonging to 1888205
[2026-03-13 07:30:14] 2026-03-13 06:28:51,508 | INFO     | did not find any defunct processes belonging to 1888205
[2026-03-13 07:30:14] 2026-03-13 06:28:51,508 | INFO     | ready for new job
[2026-03-13 07:30:14] 2026-03-13 06:28:51,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 07:30:14] 2026-03-13 06:28:51,512 | INFO     | **************************************
[2026-03-13 07:30:14] 2026-03-13 06:28:51,515 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 07:30:14] 2026-03-13 06:28:51,515 | INFO     | **************************************
[2026-03-13 07:30:14] 2026-03-13 06:28:51,515 | INFO     | 
[2026-03-13 07:30:14] 2026-03-13 06:28:51,527 | INFO     | architecture information:
[2026-03-13 07:30:14] 2026-03-13 06:28:51,528 | INFO     | executing command: cat /etc/os-release
[2026-03-13 07:30:14] 2026-03-13 06:28:51,562 | INFO     | cat /etc/os-release:
[2026-03-13 07:30:14] NAME="CentOS Linux"
[2026-03-13 07:30:14] VERSION="7 (Core)"
[2026-03-13 07:30:14] ID="centos"
[2026-03-13 07:30:14] ID_LIKE="rhel fedora"
[2026-03-13 07:30:14] VERSION_ID="7"
[2026-03-13 07:30:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 07:30:14] ANSI_COLOR="0;31"
[2026-03-13 07:30:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 07:30:14] HOME_URL="https://www.centos.org/"
[2026-03-13 07:30:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 07:30:14] 
[2026-03-13 07:30:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 07:30:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 07:30:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 07:30:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 07:30:14] 
[2026-03-13 07:30:14] 2026-03-13 06:28:51,562 | INFO     | **************************************
[2026-03-13 07:30:14] 2026-03-13 06:28:52,066 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/8
[2026-03-13 07:30:14] 2026-03-13 06:28:52,097 | INFO     | sufficient remaining disk space (193956151296 B)
[2026-03-13 07:30:14] 2026-03-13 06:28:52,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 07:30:14] 2026-03-13 06:28:52,097 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 07:30:14] 2026-03-13 06:28:52,098 | INFO     | update_server=False
[2026-03-13 07:30:14] 2026-03-13 06:28:52,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 07:30:14] 2026-03-13 06:28:52,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 07:30:14] 2026-03-13 06:28:52,099 | INFO     | aborting loop
[2026-03-13 07:30:14] 2026-03-13 06:28:52,174 | INFO     | all job control threads have been joined
[2026-03-13 07:30:14] 2026-03-13 06:28:52,558 | INFO     | all data control threads have been joined
[2026-03-13 07:30:14] 2026-03-13 06:28:52,954 | INFO     | all payload control threads have been joined
[2026-03-13 07:30:14] 2026-03-13 06:28:53,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 07:30:14] 2026-03-13 06:28:53,103 | INFO     | [job] retrieve thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,104 | INFO     | [job] job monitor thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,179 | INFO     | [job] control thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,190 | INFO     | [payload] validate_post thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,414 | INFO     | [job] validate thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 07:30:14] 2026-03-13 06:28:53,528 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,563 | INFO     | [data] control thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:53,959 | INFO     | [payload] control thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:54,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:54,084 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:54,085 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:54,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 07:30:14] 2026-03-13 06:28:54,327 | INFO     | [data] copytool_in thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:54,413 | INFO     | [payload] failed_post thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:54,429 | INFO     | [job] queue monitor thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:55,025 | INFO     | [data] copytool_out thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:28:58,208 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 07:30:14] 2026-03-13 06:29:23,514 | INFO     | PID=1877896 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 07:30:14] 2026-03-13 06:29:23,514 | INFO     | .. there are 22 such processes running
[2026-03-13 07:30:14] 2026-03-13 06:29:23,516 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 07:30:14] 2026-03-13 06:29:23,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 07:30:14] 2026-03-13 06:29:23,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 07:30:14] 2026-03-13 06:29:40,365 | INFO     | [monitor] cgroup control has ended
[2026-03-13 07:30:14] 2026-03-13 06:29:40,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22392468199232)>', '<ExcThread(monitor, started 22392230655744)>']
[2026-03-13 07:30:14] 2026-03-13 06:29:41,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 07:30:14] 2026-03-13 06:29:41,607 | INFO     | [monitor] control thread has ended
[2026-03-13 07:30:14] 2026-03-13 06:29:46,015 | INFO     | all workflow threads have been joined
[2026-03-13 07:30:14] 2026-03-13 06:29:46,016 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 07:30:14] 2026-03-13 06:29:46,016 | INFO     | traces error code: 0
[2026-03-13 07:30:14] 2026-03-13 06:29:46,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 07:30:14] 2026-03-13 06:29:46,274 [wrapper] ==== pilot stdout END ====
[2026-03-13 07:30:14] 2026-03-13 06:29:46,279 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 07:30:14] 2026-03-13 06:29:46,286 [wrapper] pilotpid: 1877896
[2026-03-13 07:30:14] 2026-03-13 06:29:46,291 [wrapper] Pilot exit status: 0
[2026-03-13 07:30:14] 2026-03-13 06:29:46,314 [wrapper] pandaids: 7041787973
[2026-03-13 07:30:14] 2026-03-13 06:29:46,569 [wrapper] cleanup supervisor_pilot 2222192 1877897
[2026-03-13 07:30:14] 2026-03-13 06:29:46,574 [wrapper] Test setup, not cleaning
[2026-03-13 07:30:14] 2026-03-13 06:29:46,579 [wrapper] apfmon messages muted
[2026-03-13 07:30:14] 2026-03-13 06:29:46,584 [wrapper] ==== wrapper stdout END ====
[2026-03-13 07:30:14] 2026-03-13 06:29:46,588 [wrapper] ==== wrapper stderr END ====
[2026-03-13 07:30:14]  *** Error codes and diagnostics ***
[2026-03-13 07:30:14]     "exeErrorCode": 0,
[2026-03-13 07:30:14]     "exeErrorDiag": "",
[2026-03-13 07:30:14]     "pilotErrorCode": 0,
[2026-03-13 07:30:14]     "pilotErrorDiag": "",
[2026-03-13 07:30:14]  *** Listing of results directory ***
[2026-03-13 07:30:14] total 616028
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc    584627 Mar 10 04:18 pilot3.tar.gz
[2026-03-13 07:30:14] -rwx------. 1 boinc boinc     36322 Mar 10 04:21 runpilot2-wrapper.sh
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc      5111 Mar 10 04:23 queuedata.json
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc       100 Mar 13 04:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 07:30:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 04:23 run_atlas
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc       105 Mar 13 04:23 job.xml
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc      6694 Mar 13 04:23 init_data.xml
[2026-03-13 07:30:14] -rw-r--r--. 2 boinc boinc 437719958 Mar 13 04:23 EVNT.46701403._002281.pool.root.1
[2026-03-13 07:30:14] -rw-r--r--. 2 boinc boinc    597965 Mar 13 04:23 input.tar.gz
[2026-03-13 07:30:14] -rw-r--r--. 2 boinc boinc     15845 Mar 13 04:23 start_atlas.sh
[2026-03-13 07:30:14] drwxrwx--x. 2 boinc boinc      4096 Mar 13 04:23 shared
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc         0 Mar 13 04:23 boinc_lockfile
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc      2571 Mar 13 04:23 pandaJob.out
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc   1006514 Mar 13 04:24 agis_schedconf.cvmfs.json
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc       443 Mar 13 04:24 workernode_map.json
[2026-03-13 07:30:14] drwx------. 5 boinc boinc      4096 Mar 13 04:24 pilot3
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc 185444608 Mar 13 07:27 HITS.48955015._011516.pool.root.1
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc       530 Mar 13 07:28 boinc_task_state.xml
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc      1029 Mar 13 07:28 memory_monitor_summary.json
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc   1511578 Mar 13 07:28 agis_ddmendpoints.agis.ALL.json
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc    354870 Mar 13 07:28 log.48955015._011516.job.log.tgz.1
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc      6363 Mar 13 07:28 heartbeat.json
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc        95 Mar 13 07:29 pilot_heartbeat.json
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc      4830 Mar 13 07:29 pilotlog.txt
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc   1496329 Mar 13 07:29 log.48955015._011516.job.log.1
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc       357 Mar 13 07:29 output.list
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc       620 Mar 13 07:29 runtime_log
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc   1873920 Mar 13 07:29 result.tar.gz
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc      9205 Mar 13 07:29 runtime_log.err
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc       666 Mar 13 07:29 KhUNDmFq2J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTmeLDmAGLZSo.diag
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc        27 Mar 13 07:30 wrapper_checkpoint.txt
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc      8192 Mar 13 07:30 boinc_mmap_file
[2026-03-13 07:30:14] -rw-r--r--. 1 boinc boinc     21234 Mar 13 07:30 stderr.txt
[2026-03-13 07:30:14] HITS file was successfully produced:
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc 185444608 Mar 13 07:27 shared/HITS.pool.root.1
[2026-03-13 07:30:14]  *** Contents of shared directory: ***
[2026-03-13 07:30:14] total 611004
[2026-03-13 07:30:14] -rw-r--r--. 2 boinc boinc 437719958 Mar 13 04:23 ATLAS.root_0
[2026-03-13 07:30:14] -rw-r--r--. 2 boinc boinc    597965 Mar 13 04:23 input.tar.gz
[2026-03-13 07:30:14] -rw-r--r--. 2 boinc boinc     15845 Mar 13 04:23 start_atlas.sh
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc 185444608 Mar 13 07:27 HITS.pool.root.1
[2026-03-13 07:30:14] -rw-------. 1 boinc boinc   1873920 Mar 13 07:29 result.tar.gz
07:30:15 (1869498): run_atlas exited; CPU time 43011.495302
07:30:15 (1869498): called boinc_finish(0)

</stderr_txt>
]]>

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