Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:08:51 (409206): wrapper (7.7.26015): starting
08:08:51 (409206): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 08:08:51] Arguments: --nthreads 12
[2026-03-10 08:08:51] Threads: 12
[2026-03-10 08:08:51] Checking for CVMFS
[2026-03-10 08:08:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 08:08:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 08:08:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 08:08:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 08:08:51] 2.13.3.0 315892 81 47128 157107 3 188 2839734 4096001 804 130560 0 274247 99.994 4558 675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-10 08:08:51] CVMFS is ok
[2026-03-10 08:08:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 08:08:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 08:08:51] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-10 08:08:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-10 08:08:51] Further information can be found at the LHC@home message board.
[2026-03-10 08:08:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 08:08:51] Checking for apptainer binary...
[2026-03-10 08:08:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 08:08:51] Running /usr/bin/apptainer --version
[2026-03-10 08:08:51] apptainer version 1.4.5
[2026-03-10 08:08:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 08:08:51] test-run
[2026-03-10 08:08:51] apptainer works
[2026-03-10 08:08:51] Set ATHENA_PROC_NUMBER=12
[2026-03-10 08:08:51] Set ATHENA_CORE_NUMBER=12
[2026-03-10 08:08:51] Starting ATLAS job with PandaID=7033894102
[2026-03-10 08:08:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:31:04]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:31:04]  guid=63a088a9-7401-486c-bffa-fc9d13f165d4
[2026-03-10 08:31:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 08:31:04]  is_altstaged=None
[2026-03-10 08:31:04]  is_tar=False
[2026-03-10 08:31:04]  lfn=log.48844350._000041.job.log.tgz.1
[2026-03-10 08:31:04]  mtime=0
[2026-03-10 08:31:04]  protocol_id=None
[2026-03-10 08:31:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 08:31:04]  replicas=None
[2026-03-10 08:31:04]  scope=mc23_13p6TeV
[2026-03-10 08:31:04]  status=None
[2026-03-10 08:31:04]  status_code=0
[2026-03-10 08:31:04]  storage_token=
[2026-03-10 08:31:04]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7033894102/log.48844350._000041.job.log.tgz.1
[2026-03-10 08:31:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/4a/log.48844350._000041.job.log.tgz.1
[2026-03-10 08:31:04]  workdir=None
[2026-03-10 08:31:04] ]
[2026-03-10 08:31:04] 2026-03-10 08:30:31,301 | INFO     | transferring file log.48844350._000041.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7033894102/log.48844350._000041.job.log.tgz.1 to /var/lib/boinc
[2026-03-10 08:31:04] 2026-03-10 08:30:31,301 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7033894102/log.48844350._000041.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.488443
[2026-03-10 08:31:04] 2026-03-10 08:30:31,306 | INFO     | adding to output.list: log.48844350._000041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/4a/log.48844350._000041.job.log.tg
[2026-03-10 08:31:04] 2026-03-10 08:30:31,306 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 08:31:04] 2026-03-10 08:30:31,307 | INFO     | summary of transferred files:
[2026-03-10 08:31:04] 2026-03-10 08:30:31,307 | INFO     |  -- lfn=log.48844350._000041.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 08:31:04] 2026-03-10 08:30:31,307 | INFO     | stage-out finished correctly
[2026-03-10 08:31:04] 2026-03-10 08:30:31,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 08:31:04] 2026-03-10 08:30:31,398 | INFO     | monitor loop #103: job 0:7033894102 is in state 'finished'
[2026-03-10 08:31:04] 2026-03-10 08:30:31,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,987 | INFO     | job 7033894102 has state=finished
[2026-03-10 08:31:04] 2026-03-10 08:30:31,987 | INFO     | preparing for final server update for job 7033894102 in state='finished'
[2026-03-10 08:31:04] 2026-03-10 08:30:31,987 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7033894102/jobReport.json
[2026-03-10 08:31:04] 2026-03-10 08:30:31,988 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-10 08:31:04] 2026-03-10 08:30:31,988 | INFO     | this job has now completed (state=finished)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,988 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,988 | INFO     | log transfer has been attempted: DONE
[2026-03-10 08:31:04] 2026-03-10 08:30:31,988 | INFO     | job 7033894102 has finished - writing final server update
[2026-03-10 08:31:04] 2026-03-10 08:30:31,989 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7033894102/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | extracted standard info from prmon json
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | sum of square deviations: 846527.5
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | sum of deviations: 739747183.0
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | mean x: 1773130850.5
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | mean y: 2569977.1428571427
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | intersect: -1549466941347.379
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | chi2: 0.2722345881384205
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | current memory leak: 873.86 B/s (using 14 data points, chi2=0.27)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | ..............................
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . Timing measurements:
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . get job = 0 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . initial setup = 2 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . payload setup = 1 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . stage-in = 0 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . payload execution = 1278 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . stage-out = 0 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | . log creation = 0 s
[2026-03-10 08:31:04] 2026-03-10 08:30:31,990 | INFO     | ..............................
[2026-03-10 08:31:04] 2026-03-10 08:30:32,007 | INFO     | 
[2026-03-10 08:31:04] 2026-03-10 08:30:32,007 | INFO     | job summary report
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | --------------------------------------------------
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | PanDA job id: 7033894102
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | task id: 48844350
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | errors: (none)
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | pilot state: finished 
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | transexitcode: 0
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | exeerrorcode: 0
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | exeerrordiag: 
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | exitcode: 0
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | exitmsg: OK
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | cpuconsumptiontime: 10567 s
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | nevents: 400
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | neventsw: 0
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | pid: 417625
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | pgrp: 417625
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | corecount: 12
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | event service: False
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | sizes: {0: 2280296, 10: 2280296, 1283: 2304950, 1285: 2314156}
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | --------------------------------------------------
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | 
[2026-03-10 08:31:04] 2026-03-10 08:30:32,008 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | job 7033894102 has completed (purged errors)
[2026-03-10 08:31:04] 2026-03-10 08:30:32,015 | INFO     | overall cleanup function is called
[2026-03-10 08:31:04] 2026-03-10 08:30:33,021 | INFO     | --- collectZombieJob: --- 10, [417625]
[2026-03-10 08:31:04] 2026-03-10 08:30:33,021 | INFO     | zombie collector waiting for pid 417625
[2026-03-10 08:31:04] 2026-03-10 08:30:33,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:31:04] 2026-03-10 08:30:33,021 | INFO     | collected zombie processes
[2026-03-10 08:31:04] 2026-03-10 08:30:33,021 | INFO     | will attempt to kill all subprocesses of pid=417625
[2026-03-10 08:31:04] 2026-03-10 08:30:33,036 | INFO     | process IDs to be killed: [417625] (in reverse order)
[2026-03-10 08:31:04] 2026-03-10 08:30:33,050 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:31:04] 2026-03-10 08:30:33,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:31:04] 2026-03-10 08:30:33,050 | INFO     | did not find any defunct processes belonging to 417625
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | did not find any defunct processes belonging to 417625
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | ready for new job
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | **************************************
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | **************************************
[2026-03-10 08:31:04] 2026-03-10 08:30:33,051 | INFO     | 
[2026-03-10 08:31:04] 2026-03-10 08:30:33,052 | INFO     | pilot is running in a VM
[2026-03-10 08:31:04] 2026-03-10 08:30:33,052 | INFO     | architecture information:
[2026-03-10 08:31:04] 2026-03-10 08:30:33,052 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:31:04] 2026-03-10 08:30:33,056 | INFO     | cat /etc/os-release:
[2026-03-10 08:31:04] NAME="CentOS Linux"
[2026-03-10 08:31:04] VERSION="7 (Core)"
[2026-03-10 08:31:04] ID="centos"
[2026-03-10 08:31:04] ID_LIKE="rhel fedora"
[2026-03-10 08:31:04] VERSION_ID="7"
[2026-03-10 08:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:31:04] ANSI_COLOR="0;31"
[2026-03-10 08:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:31:04] HOME_URL="https://www.centos.org/"
[2026-03-10 08:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:31:04] 
[2026-03-10 08:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:31:04] 
[2026-03-10 08:31:04] 2026-03-10 08:30:33,056 | INFO     | **************************************
[2026-03-10 08:31:04] 2026-03-10 08:30:33,559 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-10 08:31:04] 2026-03-10 08:30:33,563 | INFO     | sufficient remaining disk space (63972573184 B)
[2026-03-10 08:31:04] 2026-03-10 08:30:33,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:31:04] 2026-03-10 08:30:33,563 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:31:04] 2026-03-10 08:30:33,563 | INFO     | update_server=False
[2026-03-10 08:31:04] 2026-03-10 08:30:33,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:31:04] 2026-03-10 08:30:33,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:31:04] 2026-03-10 08:30:33,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:31:04] 2026-03-10 08:30:33,783 | INFO     | all payload control threads have been joined
[2026-03-10 08:31:04] 2026-03-10 08:30:33,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 08:31:04] 2026-03-10 08:30:33,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 08:31:04] 2026-03-10 08:30:33,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:31:04] 2026-03-10 08:30:33,901 | INFO     | will abort loop
[2026-03-10 08:31:04] 2026-03-10 08:30:34,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:31:04] 2026-03-10 08:30:34,569 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:34,569 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:34,604 | INFO     | all data control threads have been joined
[2026-03-10 08:31:04] 2026-03-10 08:30:34,749 | INFO     | all job control threads have been joined
[2026-03-10 08:31:04] 2026-03-10 08:30:34,788 | INFO     | [payload] control thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:34,906 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:34,988 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,271 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,542 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,548 | INFO     | [job] validate thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,588 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,609 | INFO     | [data] control thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,659 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,755 | INFO     | [job] control thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:35,783 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:36,332 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:37,569 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:43,874 | INFO     | job.realtimelogging is not enabled
[2026-03-10 08:31:04] 2026-03-10 08:30:44,879 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:31:04] 2026-03-10 08:30:57,598 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:31:04] 2026-03-10 08:30:59,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133489607874368)>', '<ExcThread(monitor, started 133489118668544)>']
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | INFO     | PID=413061 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | INFO     | .. there are 2 such processes running
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:31:04] 2026-03-10 08:31:03,204 | INFO     | [monitor] control thread has ended
[2026-03-10 08:31:04] 2026-03-10 08:31:04,357 | INFO     | all workflow threads have been joined
[2026-03-10 08:31:04] 2026-03-10 08:31:04,357 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:31:04] 2026-03-10 08:31:04,357 | INFO     | traces error code: 0
[2026-03-10 08:31:04] 2026-03-10 08:31:04,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:31:04] 2026-03-10 08:31:04,386 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:31:04] 2026-03-10 08:31:04,387 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:31:04] 2026-03-10 08:31:04,388 [wrapper] pilotpid: 413061
[2026-03-10 08:31:04] 2026-03-10 08:31:04,388 [wrapper] Pilot exit status: 0
[2026-03-10 08:31:04] 2026-03-10 08:31:04,391 [wrapper] pandaids: 7033894102
[2026-03-10 08:31:04] 2026-03-10 08:31:04,397 [wrapper] cleanup supervisor_pilot  422289 413062
[2026-03-10 08:31:04] 2026-03-10 08:31:04,398 [wrapper] Test setup, not cleaning
[2026-03-10 08:31:04] 2026-03-10 08:31:04,398 [wrapper] apfmon messages muted
[2026-03-10 08:31:04] 2026-03-10 08:31:04,399 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:31:04] 2026-03-10 08:31:04,399 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:31:04]  *** Error codes and diagnostics ***
[2026-03-10 08:31:04]     "exeErrorCode": 0,
[2026-03-10 08:31:04]     "exeErrorDiag": "",
[2026-03-10 08:31:04]     "pilotErrorCode": 0,
[2026-03-10 08:31:04]     "pilotErrorDiag": "",
[2026-03-10 08:31:04]  *** Listing of results directory ***
[2026-03-10 08:31:04] total 409096
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc    584627 Feb 28 20:24 pilot3.tar.gz
[2026-03-10 08:31:04] -rwx------ 1 boinc boinc     36322 Feb 28 20:25 runpilot2-wrapper.sh
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc      5111 Feb 28 20:27 queuedata.json
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc       100 Mar 10 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:31:04] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 08:08 run_atlas
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc       105 Mar 10 08:08 job.xml
[2026-03-10 08:31:04] -rw-r--r-- 2 boinc boinc     15845 Mar 10 08:08 start_atlas.sh
[2026-03-10 08:31:04] drwxrwx--x 2 boinc boinc      4096 Mar 10 08:08 shared
[2026-03-10 08:31:04] -rw-r--r-- 2 boinc boinc    597957 Mar 10 08:08 input.tar.gz
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc      7993 Mar 10 08:08 init_data.xml
[2026-03-10 08:31:04] -rw-r--r-- 2 boinc boinc 246767021 Mar 10 08:08 EVNT.48448599._000002.pool.root.1
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc         0 Mar 10 08:08 boinc_lockfile
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc      2604 Mar 10 08:08 pandaJob.out
[2026-03-10 08:31:04] -rw------- 1 boinc boinc   1005057 Mar 10 08:08 agis_schedconf.cvmfs.json
[2026-03-10 08:31:04] -rw------- 1 boinc boinc   1511578 Mar 10 08:08 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:31:04] -rw------- 1 boinc boinc       420 Mar 10 08:08 workernode_map.json
[2026-03-10 08:31:04] drwx------ 5 boinc boinc      4096 Mar 10 08:08 pilot3
[2026-03-10 08:31:04] -rw------- 1 boinc boinc 167057860 Mar 10 08:30 HITS.48844350._000041.pool.root.1
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc       530 Mar 10 08:30 boinc_task_state.xml
[2026-03-10 08:31:04] -rw------- 1 boinc boinc      1020 Mar 10 08:30 memory_monitor_summary.json
[2026-03-10 08:31:04] -rw------- 1 boinc boinc    339982 Mar 10 08:30 log.48844350._000041.job.log.tgz.1
[2026-03-10 08:31:04] -rw------- 1 boinc boinc      6273 Mar 10 08:30 heartbeat.json
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc      8192 Mar 10 08:31 boinc_mmap_file
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc        27 Mar 10 08:31 wrapper_checkpoint.txt
[2026-03-10 08:31:04] -rw------- 1 boinc boinc        95 Mar 10 08:31 pilot_heartbeat.json
[2026-03-10 08:31:04] -rw------- 1 boinc boinc      5145 Mar 10 08:31 pilotlog.txt
[2026-03-10 08:31:04] -rw------- 1 boinc boinc    233585 Mar 10 08:31 log.48844350._000041.job.log.1
[2026-03-10 08:31:04] -rw------- 1 boinc boinc       357 Mar 10 08:31 output.list
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc       620 Mar 10 08:31 runtime_log
[2026-03-10 08:31:04] -rw------- 1 boinc boinc    593920 Mar 10 08:31 result.tar.gz
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc      8889 Mar 10 08:31 runtime_log.err
[2026-03-10 08:31:04] -rw------- 1 boinc boinc       640 Mar 10 08:31 lWCODma3fG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBO6KDmed7BEm.diag
[2026-03-10 08:31:04] -rw-r--r-- 1 boinc boinc     21472 Mar 10 08:31 stderr.txt
[2026-03-10 08:31:04] HITS file was successfully produced:
[2026-03-10 08:31:04] -rw------- 1 boinc boinc 167057860 Mar 10 08:30 shared/HITS.pool.root.1
[2026-03-10 08:31:04]  *** Contents of shared directory: ***
[2026-03-10 08:31:04] total 405316
[2026-03-10 08:31:04] -rw-r--r-- 2 boinc boinc     15845 Mar 10 08:08 start_atlas.sh
[2026-03-10 08:31:04] -rw-r--r-- 2 boinc boinc    597957 Mar 10 08:08 input.tar.gz
[2026-03-10 08:31:04] -rw-r--r-- 2 boinc boinc 246767021 Mar 10 08:08 ATLAS.root_0
[2026-03-10 08:31:04] -rw------- 1 boinc boinc 167057860 Mar 10 08:30 HITS.pool.root.1
[2026-03-10 08:31:04] -rw------- 1 boinc boinc    593920 Mar 10 08:31 result.tar.gz
08:31:06 (409206): run_atlas exited; CPU time 10569.887428
08:31:06 (409206): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN