Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:07:39 (3422974): wrapper (7.7.26015): starting
21:07:39 (3422974): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 21:07:39] Arguments: --nthreads 4
[2026-03-14 21:07:39] Threads: 4
[2026-03-14 21:07:39] Checking for CVMFS
[2026-03-14 21:07:39] No cvmfs_config command found, will try listing directly
[2026-03-14 21:07:39] CVMFS is ok
[2026-03-14 21:07:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 21:07:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 21:07:39] Further information can be found at the LHC@home message board.
[2026-03-14 21:07:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 21:07:39] Checking for apptainer binary...
[2026-03-14 21:07:39] which: no apptainer in ((null))
[2026-03-14 21:07:39] apptainer is not installed, using version from CVMFS
[2026-03-14 21:07:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 21:07:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-14 21:07:39] apptainer works
[2026-03-14 21:07:39] Set ATHENA_PROC_NUMBER=4
[2026-03-14 21:07:39] Set ATHENA_CORE_NUMBER=4
[2026-03-14 21:07:40] Starting ATLAS job with PandaID=7047769628
[2026-03-14 21:07:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 00:47:29]  *** The last 200 lines of the pilot log: ***
[2026-03-15 00:47:29] 2026-03-14 23:46:44,121 | INFO     | log transfer has been attempted: DONE
[2026-03-15 00:47:29] 2026-03-14 23:46:44,121 | INFO     | job 7047769628 has finished - writing final server update
[2026-03-15 00:47:29] 2026-03-14 23:46:44,122 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_893821/.job.ad'
[2026-03-15 00:47:29] 2026-03-14 23:46:44,122 | INFO     | total number of processed events: 400 (read)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,147 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7047769628/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,148 | INFO     | extracted standard info from prmon json
[2026-03-15 00:47:29] 2026-03-14 23:46:44,148 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 00:47:29] 2026-03-14 23:46:44,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 00:47:29] 2026-03-14 23:46:44,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 00:47:29] 2026-03-14 23:46:44,149 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 00:47:29] 2026-03-14 23:46:44,152 | INFO     | fitting pss+swap vs Time
[2026-03-15 00:47:29] 2026-03-14 23:46:44,153 | INFO     | sum of square deviations: 3081657780.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,154 | INFO     | sum of deviations: 17621525060.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,155 | INFO     | mean x: 1773525438.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,155 | INFO     | mean y: 2326404.227906977
[2026-03-15 00:47:29] 2026-03-14 23:46:44,155 | INFO     | intersect: -10139040736.890688
[2026-03-15 00:47:29] 2026-03-14 23:46:44,155 | INFO     | chi2: 2.14887668433734
[2026-03-15 00:47:29] 2026-03-14 23:46:44,155 | INFO     | sum of square deviations: 2871616632.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,157 | INFO     | sum of deviations: 30824031603.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,157 | INFO     | mean x: 1773525285.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,157 | INFO     | mean y: 2335801.442857143
[2026-03-15 00:47:29] 2026-03-14 23:46:44,157 | INFO     | intersect: -19034745552.36782
[2026-03-15 00:47:29] 2026-03-14 23:46:44,158 | INFO     | chi2: 1.3280963523891296
[2026-03-15 00:47:29] 2026-03-14 23:46:44,158 | INFO     | current chi2=1.3280963523891296 (change=38.19578563677881 %)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,158 | INFO     | sum of square deviations: 2671343110.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,159 | INFO     | sum of deviations: 30017837090.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,159 | INFO     | mean x: 1773525133.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,160 | INFO     | mean y: 2335187.43902439
[2026-03-15 00:47:29] 2026-03-14 23:46:44,160 | INFO     | intersect: -19926736566.0635
[2026-03-15 00:47:29] 2026-03-14 23:46:44,160 | INFO     | chi2: 1.3285851259415649
[2026-03-15 00:47:29] 2026-03-14 23:46:44,160 | INFO     | current chi2=1.3285851259415649 (change=-0.03680256718994831 %)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,160 | INFO     | right removable region: 204
[2026-03-15 00:47:29] 2026-03-14 23:46:44,160 | INFO     | sum of square deviations: 2871616632.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,162 | INFO     | sum of deviations: -10904292259.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,162 | INFO     | mean x: 1773525590.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,162 | INFO     | mean y: 2346884.004761905
[2026-03-15 00:47:29] 2026-03-14 23:46:44,162 | INFO     | intersect: 6736895343.447952
[2026-03-15 00:47:29] 2026-03-14 23:46:44,163 | INFO     | chi2: 0.8402142699820843
[2026-03-15 00:47:29] 2026-03-14 23:46:44,163 | INFO     | current chi2=0.8402142699820843 (change=60.89983775680523 %)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,163 | INFO     | sum of square deviations: 2671343110.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,165 | INFO     | sum of deviations: -11195286202.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,165 | INFO     | mean x: 1773525743.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,165 | INFO     | mean y: 2347101.7073170734
[2026-03-15 00:47:29] 2026-03-14 23:46:44,165 | INFO     | intersect: 7434985838.81799
[2026-03-15 00:47:29] 2026-03-14 23:46:44,165 | INFO     | chi2: 0.8401566091167092
[2026-03-15 00:47:29] 2026-03-14 23:46:44,165 | INFO     | current chi2=0.8401566091167092 (change=0.006862638190647941 %)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,166 | INFO     | left removable region: 20
[2026-03-15 00:47:29] 2026-03-14 23:46:44,166 | INFO     | sum of square deviations: 1931608310.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,167 | INFO     | sum of deviations: 2267993054.0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,167 | INFO     | mean x: 1773525712.5
[2026-03-15 00:47:29] 2026-03-14 23:46:44,167 | INFO     | mean y: 2357051.684782609
[2026-03-15 00:47:29] 2026-03-14 23:46:44,167 | INFO     | intersect: -2080023716.8264074
[2026-03-15 00:47:29] 2026-03-14 23:46:44,168 | INFO     | chi2: 0.0002334034812525907
[2026-03-15 00:47:29] 2026-03-14 23:46:44,168 | INFO     | current memory leak: 1.17 B/s (using 184 data points, chi2=0.00)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,168 | INFO     | could have reported an average CPU frequency of 2697 MHz (11 samples)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | ..............................
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . Timing measurements:
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . get job = 0 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . initial setup = 8 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . payload setup = 9 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . stage-in = 0 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . payload execution = 13092 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,169 | INFO     | . stage-out = 1 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,170 | INFO     | . log creation = 0 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,170 | INFO     | ..............................
[2026-03-15 00:47:29] 2026-03-14 23:46:44,638 | INFO     | 
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | job summary report
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | --------------------------------------------------
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | PanDA job id: 7047769628
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | task id: 48998022
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | errors: (none)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | pilot state: finished 
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | transexitcode: 0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | exeerrorcode: 0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | exeerrordiag: 
[2026-03-15 00:47:29] 2026-03-14 23:46:44,639 | INFO     | exitcode: 0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | exitmsg: OK
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | cpuconsumptiontime: 50046 s
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | nevents: 400
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | neventsw: 0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | pid: 3441547
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | pgrp: 3441547
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | corecount: 4
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | event service: False
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | sizes: {0: 2280036, 1: 2280326, 11: 2280326, 13106: 2311056, 13107: 2311055, 13108: 2320131, 13109: 2320315, 13111: 2320509}
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | --------------------------------------------------
[2026-03-15 00:47:29] 2026-03-14 23:46:44,640 | INFO     | 
[2026-03-15 00:47:29] 2026-03-14 23:46:44,641 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-03-15 00:47:29] 2026-03-14 23:46:44,674 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,674 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,674 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,674 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 00:47:29] 2026-03-14 23:46:44,676 | INFO     | job 7047769628 has completed (purged errors)
[2026-03-15 00:47:29] 2026-03-14 23:46:44,676 | INFO     | overall cleanup function is called
[2026-03-15 00:47:29] 2026-03-14 23:46:45,685 | INFO     | --- collectZombieJob: --- 10, [3441547]
[2026-03-15 00:47:29] 2026-03-14 23:46:45,686 | INFO     | zombie collector waiting for pid 3441547
[2026-03-15 00:47:29] 2026-03-14 23:46:45,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 00:47:29] 2026-03-14 23:46:45,686 | INFO     | collected zombie processes
[2026-03-15 00:47:29] 2026-03-14 23:46:45,686 | INFO     | will attempt to kill all subprocesses of pid=3441547
[2026-03-15 00:47:29] 2026-03-14 23:46:46,554 | INFO     | process IDs to be killed: [3441547] (in reverse order)
[2026-03-15 00:47:29] 2026-03-14 23:46:46,894 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 00:47:29] 2026-03-14 23:46:46,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 00:47:29] 2026-03-14 23:46:46,931 | INFO     | did not find any defunct processes belonging to 3441547
[2026-03-15 00:47:29] 2026-03-14 23:46:46,963 | INFO     | did not find any defunct processes belonging to 3441547
[2026-03-15 00:47:29] 2026-03-14 23:46:46,963 | INFO     | ready for new job
[2026-03-15 00:47:29] 2026-03-14 23:46:46,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 00:47:29] 2026-03-14 23:46:46,966 | INFO     | **************************************
[2026-03-15 00:47:29] 2026-03-14 23:46:46,966 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 00:47:29] 2026-03-14 23:46:46,967 | INFO     | **************************************
[2026-03-15 00:47:29] 2026-03-14 23:46:46,967 | INFO     | 
[2026-03-15 00:47:29] 2026-03-14 23:46:46,975 | INFO     | architecture information:
[2026-03-15 00:47:29] 2026-03-14 23:46:46,976 | INFO     | executing command: cat /etc/os-release
[2026-03-15 00:47:29] 2026-03-14 23:46:47,005 | INFO     | cat /etc/os-release:
[2026-03-15 00:47:29] NAME="CentOS Linux"
[2026-03-15 00:47:29] VERSION="7 (Core)"
[2026-03-15 00:47:29] ID="centos"
[2026-03-15 00:47:29] ID_LIKE="rhel fedora"
[2026-03-15 00:47:29] VERSION_ID="7"
[2026-03-15 00:47:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 00:47:29] ANSI_COLOR="0;31"
[2026-03-15 00:47:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 00:47:29] HOME_URL="https://www.centos.org/"
[2026-03-15 00:47:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 00:47:29] 
[2026-03-15 00:47:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 00:47:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 00:47:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 00:47:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 00:47:29] 
[2026-03-15 00:47:29] 2026-03-14 23:46:47,005 | INFO     | **************************************
[2026-03-15 00:47:29] 2026-03-14 23:46:47,508 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-03-15 00:47:29] 2026-03-14 23:46:47,537 | INFO     | sufficient remaining disk space (64248348672 B)
[2026-03-15 00:47:29] 2026-03-14 23:46:47,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 00:47:29] 2026-03-14 23:46:47,537 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 00:47:29] 2026-03-14 23:46:47,537 | INFO     | update_server=False
[2026-03-15 00:47:29] 2026-03-14 23:46:47,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 00:47:29] 2026-03-14 23:46:47,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 00:47:29] 2026-03-14 23:46:47,723 | INFO     | all data control threads have been joined
[2026-03-15 00:47:29] 2026-03-14 23:46:48,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:47:29] 2026-03-14 23:46:48,060 | INFO     | aborting loop
[2026-03-15 00:47:29] 2026-03-14 23:46:48,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 00:47:29] 2026-03-14 23:46:48,542 | INFO     | [job] retrieve thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:48,622 | INFO     | all job control threads have been joined
[2026-03-15 00:47:29] 2026-03-14 23:46:48,685 | INFO     | [payload] validate_post thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:48,729 | INFO     | [data] control thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:48,731 | INFO     | all payload control threads have been joined
[2026-03-15 00:47:29] 2026-03-14 23:46:48,870 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:48,871 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,065 | INFO     | [job] job monitor thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,080 | INFO     | [job] validate thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,081 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,152 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:47:29] 2026-03-14 23:46:49,544 | INFO     | [data] copytool_out thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,627 | INFO     | [job] control thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,664 | INFO     | [data] copytool_in thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,736 | INFO     | [payload] control thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:49,791 | INFO     | [payload] failed_post thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:50,278 | INFO     | [job] queue monitor thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:46:52,262 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 00:47:29] 2026-03-14 23:47:17,278 | INFO     | PID=3428829 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 00:47:29] 2026-03-14 23:47:17,278 | INFO     | .. there are 24 such processes running
[2026-03-15 00:47:29] 2026-03-14 23:47:17,279 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 00:47:29] 2026-03-14 23:47:17,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 00:47:29] 2026-03-14 23:47:17,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 00:47:29] 2026-03-14 23:47:23,226 | INFO     | [monitor] cgroup control has ended
[2026-03-15 00:47:29] 2026-03-14 23:47:23,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22472393643840)>', '<ExcThread(monitor, started 22472151013120)>']
[2026-03-15 00:47:29] 2026-03-14 23:47:24,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 00:47:29] 2026-03-14 23:47:24,314 | INFO     | [monitor] control thread has ended
[2026-03-15 00:47:29] 2026-03-14 23:47:28,911 | INFO     | all workflow threads have been joined
[2026-03-15 00:47:29] 2026-03-14 23:47:28,911 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 00:47:29] 2026-03-14 23:47:28,912 | INFO     | traces error code: 0
[2026-03-15 00:47:29] 2026-03-14 23:47:28,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 00:47:29] 2026-03-14 23:47:29,054 [wrapper] ==== pilot stdout END ====
[2026-03-15 00:47:29] 2026-03-14 23:47:29,058 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 00:47:29] 2026-03-14 23:47:29,062 [wrapper] pilotpid: 3428829
[2026-03-15 00:47:29] 2026-03-14 23:47:29,066 [wrapper] Pilot exit status: 0
[2026-03-15 00:47:29] 2026-03-14 23:47:29,082 [wrapper] pandaids: 7047769628
[2026-03-15 00:47:29] 2026-03-14 23:47:29,271 [wrapper] cleanup supervisor_pilot 3966169 3428830
[2026-03-15 00:47:29] 2026-03-14 23:47:29,275 [wrapper] Test setup, not cleaning
[2026-03-15 00:47:29] 2026-03-14 23:47:29,279 [wrapper] apfmon messages muted
[2026-03-15 00:47:29] 2026-03-14 23:47:29,283 [wrapper] ==== wrapper stdout END ====
[2026-03-15 00:47:29] 2026-03-14 23:47:29,286 [wrapper] ==== wrapper stderr END ====
[2026-03-15 00:47:29]  *** Error codes and diagnostics ***
[2026-03-15 00:47:29]     "exeErrorCode": 0,
[2026-03-15 00:47:29]     "exeErrorDiag": "",
[2026-03-15 00:47:29]     "pilotErrorCode": 0,
[2026-03-15 00:47:29]     "pilotErrorDiag": "",
[2026-03-15 00:47:29]  *** Listing of results directory ***
[2026-03-15 00:47:29] total 559724
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc    584627 Mar  9 22:23 pilot3.tar.gz
[2026-03-15 00:47:29] -rwx------. 1 boinc boinc     36322 Mar  9 22:27 runpilot2-wrapper.sh
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc      5111 Mar  9 22:28 queuedata.json
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc       100 Mar 14 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 00:47:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 21:07 run_atlas
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc       105 Mar 14 21:07 job.xml
[2026-03-15 00:47:29] -rw-r--r--. 2 boinc boinc 323558043 Mar 14 21:07 EVNT.48998020._000084.pool.root.1
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc      6620 Mar 14 21:07 init_data.xml
[2026-03-15 00:47:29] -rw-r--r--. 2 boinc boinc     15845 Mar 14 21:07 start_atlas.sh
[2026-03-15 00:47:29] drwxrwx--x. 2 boinc boinc      4096 Mar 14 21:07 shared
[2026-03-15 00:47:29] -rw-r--r--. 2 boinc boinc    597970 Mar 14 21:07 input.tar.gz
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc         0 Mar 14 21:07 boinc_lockfile
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc      2611 Mar 14 21:07 pandaJob.out
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc   1005897 Mar 14 21:07 agis_schedconf.cvmfs.json
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc       443 Mar 14 21:08 workernode_map.json
[2026-03-15 00:47:29] drwx------. 5 boinc boinc      4096 Mar 14 21:08 pilot3
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc 241272326 Mar 15 00:45 HITS.48998022._002121.pool.root.1
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc       530 Mar 15 00:46 boinc_task_state.xml
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc      1030 Mar 15 00:46 memory_monitor_summary.json
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc   1511579 Mar 15 00:46 agis_ddmendpoints.agis.ALL.json
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc    386386 Mar 15 00:46 log.48998022._002121.job.log.tgz.1
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc      6347 Mar 15 00:46 heartbeat.json
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc        95 Mar 15 00:47 pilot_heartbeat.json
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc      8192 Mar 15 00:47 boinc_mmap_file
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc        28 Mar 15 00:47 wrapper_checkpoint.txt
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc      4829 Mar 15 00:47 pilotlog.txt
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc   1809472 Mar 15 00:47 log.48998022._002121.job.log.1
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc       357 Mar 15 00:47 output.list
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc       620 Mar 15 00:47 runtime_log
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc   2211840 Mar 15 00:47 result.tar.gz
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc      9205 Mar 15 00:47 runtime_log.err
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc       666 Mar 15 00:47 ltoMDmoJxJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXHbLDm61WZ7n.diag
[2026-03-15 00:47:29] -rw-r--r--. 1 boinc boinc     20893 Mar 15 00:47 stderr.txt
[2026-03-15 00:47:29] HITS file was successfully produced:
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc 241272326 Mar 15 00:45 shared/HITS.pool.root.1
[2026-03-15 00:47:29]  *** Contents of shared directory: ***
[2026-03-15 00:47:29] total 554364
[2026-03-15 00:47:29] -rw-r--r--. 2 boinc boinc 323558043 Mar 14 21:07 ATLAS.root_0
[2026-03-15 00:47:29] -rw-r--r--. 2 boinc boinc     15845 Mar 14 21:07 start_atlas.sh
[2026-03-15 00:47:29] -rw-r--r--. 2 boinc boinc    597970 Mar 14 21:07 input.tar.gz
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc 241272326 Mar 15 00:45 HITS.pool.root.1
[2026-03-15 00:47:29] -rw-------. 1 boinc boinc   2211840 Mar 15 00:47 result.tar.gz
00:47:31 (3422974): run_atlas exited; CPU time 50921.926694
00:47:31 (3422974): called boinc_finish(0)

</stderr_txt>
]]>

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