Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:43 (3657290): wrapper (7.7.26015): starting
23:31:43 (3657290): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 23:31:43] Arguments: --nthreads 8
[2026-03-09 23:31:43] Threads: 8
[2026-03-09 23:31:43] Checking for CVMFS
[2026-03-09 23:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 23:31:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 23:31:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 23:31:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 23:31:45] 2.13.3.0 3539256 102772 339488 157100 2 354 36051658 40960001 14650 16776704 0 206935018 99.578 236356374 34620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 0
[2026-03-09 23:31:45] CVMFS is ok
[2026-03-09 23:31:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 23:31:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 23:31:45] Further information can be found at the LHC@home message board.
[2026-03-09 23:31:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 23:31:45] Checking for apptainer binary...
[2026-03-09 23:31:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 23:31:45] Running /usr/bin/apptainer --version
[2026-03-09 23:31:45] apptainer version 1.4.5-2.el9
[2026-03-09 23:31:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 23:31:46] c-210-31-1.aglt2.org
[2026-03-09 23:31:46] apptainer works
[2026-03-09 23:31:46] Set ATHENA_PROC_NUMBER=8
[2026-03-09 23:31:46] Set ATHENA_CORE_NUMBER=8
[2026-03-09 23:31:46] Starting ATLAS job with PandaID=7047245634
[2026-03-09 23:31:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 09:43:54]  *** The last 200 lines of the pilot log: ***
[2026-03-10 09:43:54] 2026-03-10 13:43:04,040 | INFO     | extracted standard info from prmon json
[2026-03-10 09:43:54] 2026-03-10 13:43:04,040 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 09:43:54] 2026-03-10 13:43:04,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 09:43:54] 2026-03-10 13:43:04,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 09:43:54] 2026-03-10 13:43:04,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 09:43:54] 2026-03-10 13:43:04,050 | INFO     | fitting pss+swap vs Time
[2026-03-10 09:43:54] 2026-03-10 13:43:04,051 | INFO     | sum of square deviations: 66306816210.99809
[2026-03-10 09:43:54] 2026-03-10 13:43:04,057 | INFO     | sum of deviations: 158289996024.32114
[2026-03-10 09:43:54] 2026-03-10 13:43:04,058 | INFO     | mean x: 1773131921.9983277
[2026-03-10 09:43:54] 2026-03-10 13:43:04,058 | INFO     | mean y: 2531987.3210702343
[2026-03-10 09:43:54] 2026-03-10 13:43:04,058 | INFO     | intersect: -4230351763.130494
[2026-03-10 09:43:54] 2026-03-10 13:43:04,059 | INFO     | chi2: 3.2930597643141204
[2026-03-10 09:43:54] 2026-03-10 13:43:04,059 | INFO     | sum of square deviations: 64657471522.24636
[2026-03-10 09:43:54] 2026-03-10 13:43:04,066 | INFO     | sum of deviations: 156121868713.21765
[2026-03-10 09:43:54] 2026-03-10 13:43:04,066 | INFO     | mean x: 1773131769.5025296
[2026-03-10 09:43:54] 2026-03-10 13:43:04,066 | INFO     | mean y: 2531786.854974705
[2026-03-10 09:43:54] 2026-03-10 13:43:04,067 | INFO     | intersect: -4278870482.8620467
[2026-03-10 09:43:54] 2026-03-10 13:43:04,067 | INFO     | chi2: 3.293599756763958
[2026-03-10 09:43:54] 2026-03-10 13:43:04,067 | INFO     | current chi2=3.293599756763958 (change=-0.01639789400998562 %)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,068 | INFO     | right removable region: 592
[2026-03-10 09:43:54] 2026-03-10 13:43:04,068 | INFO     | sum of square deviations: 64657289742.246346
[2026-03-10 09:43:54] 2026-03-10 13:43:04,075 | INFO     | sum of deviations: -5342932019.98989
[2026-03-10 09:43:54] 2026-03-10 13:43:04,075 | INFO     | mean x: 1773132074.5025296
[2026-03-10 09:43:54] 2026-03-10 13:43:04,075 | INFO     | mean y: 2547099.9932546373
[2026-03-10 09:43:54] 2026-03-10 13:43:04,075 | INFO     | intersect: 149069234.99608696
[2026-03-10 09:43:54] 2026-03-10 13:43:04,076 | INFO     | chi2: 0.5692113292222525
[2026-03-10 09:43:54] 2026-03-10 13:43:04,076 | INFO     | current chi2=0.5692113292222525 (change=82.71481934853956 %)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,077 | INFO     | sum of square deviations: 63035453336.99842
[2026-03-10 09:43:54] 2026-03-10 13:43:04,083 | INFO     | sum of deviations: -43491316862.585075
[2026-03-10 09:43:54] 2026-03-10 13:43:04,083 | INFO     | mean x: 1773132227.0017006
[2026-03-10 09:43:54] 2026-03-10 13:43:04,083 | INFO     | mean y: 2550681.5850340137
[2026-03-10 09:43:54] 2026-03-10 13:43:04,083 | INFO     | intersect: 1225923425.6742597
[2026-03-10 09:43:54] 2026-03-10 13:43:04,084 | INFO     | chi2: 0.40583526912785606
[2026-03-10 09:43:54] 2026-03-10 13:43:04,084 | INFO     | current chi2=0.40583526912785606 (change=28.702179964974857 %)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,085 | INFO     | sum of square deviations: 61440894669.739136
[2026-03-10 09:43:54] 2026-03-10 13:43:04,092 | INFO     | sum of deviations: -43247459226.041214
[2026-03-10 09:43:54] 2026-03-10 13:43:04,092 | INFO     | mean x: 1773132379.5042882
[2026-03-10 09:43:54] 2026-03-10 13:43:04,092 | INFO     | mean y: 2550651.816466552
[2026-03-10 09:43:54] 2026-03-10 13:43:04,092 | INFO     | intersect: 1250635835.0999918
[2026-03-10 09:43:54] 2026-03-10 13:43:04,093 | INFO     | chi2: 0.38501916455909724
[2026-03-10 09:43:54] 2026-03-10 13:43:04,093 | INFO     | current chi2=0.38501916455909724 (change=5.129200479172949 %)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,093 | INFO     | left removable region: 30
[2026-03-10 09:43:54] 2026-03-10 13:43:04,094 | INFO     | sum of square deviations: 55037324589.822205
[2026-03-10 09:43:54] 2026-03-10 13:43:04,100 | INFO     | sum of deviations: 46894199742.46972
[2026-03-10 09:43:54] 2026-03-10 13:43:04,101 | INFO     | mean x: 1773132654.0177937
[2026-03-10 09:43:54] 2026-03-10 13:43:04,101 | INFO     | mean y: 2541424.153024911
[2026-03-10 09:43:54] 2026-03-10 13:43:04,101 | INFO     | intersect: -1508244891.6262553
[2026-03-10 09:43:54] 2026-03-10 13:43:04,102 | INFO     | chi2: 0.1084217674949304
[2026-03-10 09:43:54] 2026-03-10 13:43:04,102 | INFO     | current memory leak: 0.85 B/s (using 562 data points, chi2=0.11)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | could have reported an average CPU frequency of 2792 MHz (24 samples)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | ..............................
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . Timing measurements:
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . get job = 0 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . initial setup = 45 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . payload setup = 48 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . stage-in = 0 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . payload execution = 36501 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . stage-out = 2 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,103 | INFO     | . log creation = 0 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,104 | INFO     | ..............................
[2026-03-10 09:43:54] 2026-03-10 13:43:04,188 | INFO     | 
[2026-03-10 09:43:54] 2026-03-10 13:43:04,188 | INFO     | job summary report
[2026-03-10 09:43:54] 2026-03-10 13:43:04,188 | INFO     | --------------------------------------------------
[2026-03-10 09:43:54] 2026-03-10 13:43:04,188 | INFO     | PanDA job id: 7047245634
[2026-03-10 09:43:54] 2026-03-10 13:43:04,188 | INFO     | task id: 48958635
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | errors: (none)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | pilot state: finished 
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | transexitcode: 0
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | exeerrorcode: 0
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | exeerrordiag: 
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | exitcode: 0
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | exitmsg: OK
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | cpuconsumptiontime: 41942 s
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | nevents: 400
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | neventsw: 0
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | pid: 3668402
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | pgrp: 3668402
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | corecount: 8
[2026-03-10 09:43:54] 2026-03-10 13:43:04,189 | INFO     | event service: False
[2026-03-10 09:43:54] 2026-03-10 13:43:04,190 | INFO     | sizes: {0: 2279096, 1: 2279781, 2: 2279781, 4: 2280270, 36554: 2320872, 36557: 2330054, 36558: 2330192}
[2026-03-10 09:43:54] 2026-03-10 13:43:04,190 | INFO     | --------------------------------------------------
[2026-03-10 09:43:54] 2026-03-10 13:43:04,190 | INFO     | 
[2026-03-10 09:43:54] 2026-03-10 13:43:04,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-10 09:43:54] 2026-03-10 13:43:04,211 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,211 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | job 7047245634 has completed (purged errors)
[2026-03-10 09:43:54] 2026-03-10 13:43:04,213 | INFO     | overall cleanup function is called
[2026-03-10 09:43:54] 2026-03-10 13:43:05,222 | INFO     | --- collectZombieJob: --- 10, [3668402]
[2026-03-10 09:43:54] 2026-03-10 13:43:05,223 | INFO     | zombie collector waiting for pid 3668402
[2026-03-10 09:43:54] 2026-03-10 13:43:05,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 09:43:54] 2026-03-10 13:43:05,223 | INFO     | collected zombie processes
[2026-03-10 09:43:54] 2026-03-10 13:43:05,223 | INFO     | will attempt to kill all subprocesses of pid=3668402
[2026-03-10 09:43:54] 2026-03-10 13:43:05,794 | INFO     | process IDs to be killed: [3668402] (in reverse order)
[2026-03-10 09:43:54] 2026-03-10 13:43:05,879 | WARNING  | process 3668402 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 09:43:54] 2026-03-10 13:43:05,938 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 09:43:54] 2026-03-10 13:43:05,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 09:43:54] 2026-03-10 13:43:05,954 | INFO     | did not find any defunct processes belonging to 3668402
[2026-03-10 09:43:54] 2026-03-10 13:43:05,977 | INFO     | did not find any defunct processes belonging to 3668402
[2026-03-10 09:43:54] 2026-03-10 13:43:05,977 | INFO     | ready for new job
[2026-03-10 09:43:54] 2026-03-10 13:43:05,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 09:43:54] 2026-03-10 13:43:05,994 | INFO     | **************************************
[2026-03-10 09:43:54] 2026-03-10 13:43:05,999 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 09:43:54] 2026-03-10 13:43:05,999 | INFO     | **************************************
[2026-03-10 09:43:54] 2026-03-10 13:43:05,999 | INFO     | 
[2026-03-10 09:43:54] 2026-03-10 13:43:06,003 | INFO     | architecture information:
[2026-03-10 09:43:54] 2026-03-10 13:43:06,007 | INFO     | executing command: cat /etc/os-release
[2026-03-10 09:43:54] 2026-03-10 13:43:06,043 | INFO     | cat /etc/os-release:
[2026-03-10 09:43:54] NAME="CentOS Linux"
[2026-03-10 09:43:54] VERSION="7 (Core)"
[2026-03-10 09:43:54] ID="centos"
[2026-03-10 09:43:54] ID_LIKE="rhel fedora"
[2026-03-10 09:43:54] VERSION_ID="7"
[2026-03-10 09:43:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 09:43:54] ANSI_COLOR="0;31"
[2026-03-10 09:43:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 09:43:54] HOME_URL="https://www.centos.org/"
[2026-03-10 09:43:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 09:43:54] 
[2026-03-10 09:43:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 09:43:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 09:43:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 09:43:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 09:43:54] 
[2026-03-10 09:43:54] 2026-03-10 13:43:06,048 | INFO     | **************************************
[2026-03-10 09:43:54] 2026-03-10 13:43:06,163 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:43:54] 2026-03-10 13:43:06,470 | INFO     | number of running child processes to parent process 3668402: 1
[2026-03-10 09:43:54] 2026-03-10 13:43:06,471 | INFO     | maximum number of monitored processes: 7
[2026-03-10 09:43:54] 2026-03-10 13:43:06,472 | INFO     | aborting job monitoring since job object (job id=7047245634) has expired
[2026-03-10 09:43:54] 2026-03-10 13:43:06,557 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-10 09:43:54] 2026-03-10 13:43:06,575 | INFO     | sufficient remaining disk space (73899442176 B)
[2026-03-10 09:43:54] 2026-03-10 13:43:06,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 09:43:54] 2026-03-10 13:43:06,575 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 09:43:54] 2026-03-10 13:43:06,576 | INFO     | update_server=False
[2026-03-10 09:43:54] 2026-03-10 13:43:06,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 09:43:54] 2026-03-10 13:43:06,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 09:43:54] 2026-03-10 13:43:06,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:43:54] 2026-03-10 13:43:06,576 | INFO     | will abort loop
[2026-03-10 09:43:54] 2026-03-10 13:43:06,969 | INFO     | all data control threads have been joined
[2026-03-10 09:43:54] 2026-03-10 13:43:07,582 | INFO     | [job] retrieve thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:07,588 | INFO     | [job] job monitor thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:07,603 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:07,611 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:07,614 | INFO     | [job] validate thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:07,650 | INFO     | all job control threads have been joined
[2026-03-10 09:43:54] 2026-03-10 13:43:07,835 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:07,974 | INFO     | [data] control thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:08,065 | INFO     | all payload control threads have been joined
[2026-03-10 09:43:54] 2026-03-10 13:43:08,162 | INFO     | [payload] validate_post thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:08,463 | INFO     | [payload] failed_post thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:08,523 | INFO     | [data] copytool_in thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:08,584 | INFO     | [data] copytool_out thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:08,657 | INFO     | [job] control thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:08,753 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:09,072 | INFO     | [payload] control thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:09,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:43:54] 2026-03-10 13:43:09,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 09:43:54] 2026-03-10 13:43:10,222 | INFO     | [job] queue monitor thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:13,655 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 09:43:54] 2026-03-10 13:43:36,344 | INFO     | PID=3661752 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 09:43:54] 2026-03-10 13:43:36,344 | INFO     | .. there are 17 such processes running
[2026-03-10 09:43:54] 2026-03-10 13:43:36,344 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 09:43:54] 2026-03-10 13:43:36,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 09:43:54] 2026-03-10 13:43:36,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 09:43:54] 2026-03-10 13:43:48,129 | INFO     | [monitor] cgroup control has ended
[2026-03-10 09:43:54] 2026-03-10 13:43:49,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787374556992)>', '<ExcThread(monitor, started 139786991941376)>']
[2026-03-10 09:43:54] 2026-03-10 13:43:49,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 09:43:54] 2026-03-10 13:43:49,418 | INFO     | [monitor] control thread has ended
[2026-03-10 09:43:54] 2026-03-10 13:43:54,076 | INFO     | all workflow threads have been joined
[2026-03-10 09:43:54] 2026-03-10 13:43:54,076 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 09:43:54] 2026-03-10 13:43:54,076 | INFO     | traces error code: 0
[2026-03-10 09:43:54] 2026-03-10 13:43:54,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 09:43:54] 2026-03-10 13:43:54,265 [wrapper] ==== pilot stdout END ====
[2026-03-10 09:43:54] 2026-03-10 13:43:54,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 09:43:54] 2026-03-10 13:43:54,278 [wrapper] pilotpid: 3661752
[2026-03-10 09:43:54] 2026-03-10 13:43:54,280 [wrapper] Pilot exit status: 0
[2026-03-10 09:43:54] 2026-03-10 13:43:54,294 [wrapper] pandaids: 7047245634
[2026-03-10 09:43:54] 2026-03-10 13:43:54,363 [wrapper] cleanup supervisor_pilot  613655 3661753
[2026-03-10 09:43:54] 2026-03-10 13:43:54,366 [wrapper] Test setup, not cleaning
[2026-03-10 09:43:54] 2026-03-10 13:43:54,369 [wrapper] apfmon messages muted
[2026-03-10 09:43:54] 2026-03-10 13:43:54,373 [wrapper] ==== wrapper stdout END ====
[2026-03-10 09:43:54] 2026-03-10 13:43:54,376 [wrapper] ==== wrapper stderr END ====
[2026-03-10 09:43:54]  *** Error codes and diagnostics ***
[2026-03-10 09:43:54]     "exeErrorCode": 0,
[2026-03-10 09:43:54]     "exeErrorDiag": "",
[2026-03-10 09:43:54]     "pilotErrorCode": 0,
[2026-03-10 09:43:54]     "pilotErrorDiag": "",
[2026-03-10 09:43:54]  *** Listing of results directory ***
[2026-03-10 09:43:54] total 450460
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas    602657 Feb  3 06:11 pilot3.tar.gz
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 08:35 queuedata.json
[2026-03-10 09:43:54] -rwx------. 1 boincer umatlas     36322 Mar  9 08:35 runpilot2-wrapper.sh
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas       100 Mar  9 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 09:43:54] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 23:31 run_atlas
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas       105 Mar  9 23:31 job.xml
[2026-03-10 09:43:54] -rw-r--r--. 2 boincer umatlas 264486885 Mar  9 23:31 EVNT.48958633._000094.pool.root.1
[2026-03-10 09:43:54] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 23:31 start_atlas.sh
[2026-03-10 09:43:54] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 23:31 shared
[2026-03-10 09:43:54] -rw-r--r--. 2 boincer umatlas    616287 Mar  9 23:31 input.tar.gz
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas         0 Mar  9 23:31 boinc_lockfile
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas      2526 Mar  9 23:31 pandaJob.out
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas        57 Mar  9 23:31 setup.sh.local
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas   1006495 Mar  9 23:32 agis_schedconf.cvmfs.json
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas       443 Mar  9 23:33 workernode_map.json
[2026-03-10 09:43:54] drwx------. 7 boincer umatlas      4096 Mar  9 23:33 pilot3
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas      6843 Mar 10 09:40 init_data.xml
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas 182312703 Mar 10 09:42 HITS.48958635._002423.pool.root.1
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas       531 Mar 10 09:42 boinc_task_state.xml
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas        95 Mar 10 09:42 pilot_heartbeat.json
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas      1042 Mar 10 09:42 memory_monitor_summary.json
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas   1511578 Mar 10 09:43 agis_ddmendpoints.agis.ALL.json
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas    741047 Mar 10 09:43 log.48958635._002423.job.log.tgz.1
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas      6393 Mar 10 09:43 heartbeat.json
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 09:43 boinc_mmap_file
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas        28 Mar 10 09:43 wrapper_checkpoint.txt
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas      5227 Mar 10 09:43 pilotlog.txt
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas   4509228 Mar 10 09:43 log.48958635._002423.job.log.1
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas       357 Mar 10 09:43 output.list
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas       620 Mar 10 09:43 runtime_log
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas   5263360 Mar 10 09:43 result.tar.gz
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas      9352 Mar 10 09:43 runtime_log.err
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas       658 Mar 10 09:43 NmgKDmA1oJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmPcLDmfET4No.diag
[2026-03-10 09:43:54] -rw-r--r--. 1 boincer umatlas     21176 Mar 10 09:43 stderr.txt
[2026-03-10 09:43:54] HITS file was successfully produced:
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas 182312703 Mar 10 09:42 shared/HITS.pool.root.1
[2026-03-10 09:43:54]  *** Contents of shared directory: ***
[2026-03-10 09:43:54] total 442096
[2026-03-10 09:43:54] -rw-r--r--. 2 boincer umatlas 264486885 Mar  9 23:31 ATLAS.root_0
[2026-03-10 09:43:54] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 23:31 start_atlas.sh
[2026-03-10 09:43:54] -rw-r--r--. 2 boincer umatlas    616287 Mar  9 23:31 input.tar.gz
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas 182312703 Mar 10 09:42 HITS.pool.root.1
[2026-03-10 09:43:54] -rw-------. 1 boincer umatlas   5263360 Mar 10 09:43 result.tar.gz
09:43:55 (3657290): run_atlas exited; CPU time 43243.983170
09:43:55 (3657290): called boinc_finish(0)

</stderr_txt>
]]>

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