Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:47 (1904334): wrapper (7.7.26015): starting
22:22:47 (1904334): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 22:22:47] Arguments: --nthreads 8
[2026-03-09 22:22:47] Threads: 8
[2026-03-09 22:22:47] Checking for CVMFS
[2026-03-09 22:22:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 22:22:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 22:22:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 22:22:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 22:22:50] 2.13.3.0 12161 179204 372528 157098 1 170 23070252 40960001 19276 16776704 0 476913181 99.588 541179655 37275 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 22:22:50] CVMFS is ok
[2026-03-09 22:22:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 22:22:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 22:22:50] Further information can be found at the LHC@home message board.
[2026-03-09 22:22:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 22:22:50] Checking for apptainer binary...
[2026-03-09 22:22:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 22:22:50] Running /usr/bin/apptainer --version
[2026-03-09 22:22:51] apptainer version 1.4.5-2.el9
[2026-03-09 22:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 22:22:52] c6-5-7-1.aglt2.org
[2026-03-09 22:22:52] apptainer works
[2026-03-09 22:22:52] Set ATHENA_PROC_NUMBER=8
[2026-03-09 22:22:52] Set ATHENA_CORE_NUMBER=8
[2026-03-09 22:22:52] Starting ATLAS job with PandaID=7035613253
[2026-03-09 22:22:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 10:33:12]  *** The last 200 lines of the pilot log: ***
[2026-03-10 10:33:12] 2026-03-10 14:32:20,370 | INFO     | chi2: 5.150897738822785
[2026-03-10 10:33:12] 2026-03-10 14:32:20,371 | INFO     | sum of square deviations: 110511496984.79005
[2026-03-10 10:33:12] 2026-03-10 14:32:20,403 | INFO     | sum of deviations: 544953776347.1011
[2026-03-10 10:33:12] 2026-03-10 14:32:20,408 | INFO     | mean x: 1773131172.7771509
[2026-03-10 10:33:12] 2026-03-10 14:32:20,408 | INFO     | mean y: 2498211.2284908323
[2026-03-10 10:33:12] 2026-03-10 14:32:20,408 | INFO     | intersect: -8741157923.45099
[2026-03-10 10:33:12] 2026-03-10 14:32:20,409 | INFO     | chi2: 5.151227776156517
[2026-03-10 10:33:12] 2026-03-10 14:32:20,409 | INFO     | current chi2=5.151227776156517 (change=-0.006407374994944472 %)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,409 | INFO     | right removable region: 708
[2026-03-10 10:33:12] 2026-03-10 14:32:20,410 | INFO     | sum of square deviations: 110511160874.78992
[2026-03-10 10:33:12] 2026-03-10 14:32:20,450 | INFO     | sum of deviations: 342957843277.4529
[2026-03-10 10:33:12] 2026-03-10 14:32:20,451 | INFO     | mean x: 1773131477.7771509
[2026-03-10 10:33:12] 2026-03-10 14:32:20,451 | INFO     | mean y: 2512179.768688293
[2026-03-10 10:33:12] 2026-03-10 14:32:20,451 | INFO     | intersect: -5500184042.514304
[2026-03-10 10:33:12] 2026-03-10 14:32:20,452 | INFO     | chi2: 2.0483431992148162
[2026-03-10 10:33:12] 2026-03-10 14:32:20,452 | INFO     | current chi2=2.0483431992148162 (change=60.23327771048012 %)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,453 | INFO     | sum of square deviations: 108189435541.87373
[2026-03-10 10:33:12] 2026-03-10 14:32:20,482 | INFO     | sum of deviations: 190535460579.17743
[2026-03-10 10:33:12] 2026-03-10 14:32:20,482 | INFO     | mean x: 1773131630.2798295
[2026-03-10 10:33:12] 2026-03-10 14:32:20,482 | INFO     | mean y: 2522188.1463068184
[2026-03-10 10:33:12] 2026-03-10 14:32:20,482 | INFO     | intersect: -3120189841.459536
[2026-03-10 10:33:12] 2026-03-10 14:32:20,483 | INFO     | chi2: 0.47175313182048084
[2026-03-10 10:33:12] 2026-03-10 14:32:20,483 | INFO     | current chi2=0.47175313182048084 (change=76.9690385868288 %)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,484 | INFO     | sum of square deviations: 105900584086.6294
[2026-03-10 10:33:12] 2026-03-10 14:32:20,493 | INFO     | sum of deviations: 128845747416.24605
[2026-03-10 10:33:12] 2026-03-10 14:32:20,493 | INFO     | mean x: 1773131782.7782547
[2026-03-10 10:33:12] 2026-03-10 14:32:20,493 | INFO     | mean y: 2526292.5951359086
[2026-03-10 10:33:12] 2026-03-10 14:32:20,493 | INFO     | intersect: -2154784658.89762
[2026-03-10 10:33:12] 2026-03-10 14:32:20,494 | INFO     | chi2: 0.18768040337820832
[2026-03-10 10:33:12] 2026-03-10 14:32:20,494 | INFO     | current chi2=0.18768040337820832 (change=60.21639482202155 %)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,495 | INFO     | sum of square deviations: 103644202227.32712
[2026-03-10 10:33:12] 2026-03-10 14:32:20,504 | INFO     | sum of deviations: 97571098901.683
[2026-03-10 10:33:12] 2026-03-10 14:32:20,504 | INFO     | mean x: 1773131935.2780979
[2026-03-10 10:33:12] 2026-03-10 14:32:20,504 | INFO     | mean y: 2528404.4265129683
[2026-03-10 10:33:12] 2026-03-10 14:32:20,504 | INFO     | intersect: -1666705645.3787014
[2026-03-10 10:33:12] 2026-03-10 14:32:20,505 | INFO     | chi2: 0.12432061026696124
[2026-03-10 10:33:12] 2026-03-10 14:32:20,505 | INFO     | current chi2=0.12432061026696124 (change=33.75940799933501 %)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,524 | INFO     | sum of square deviations: 101420057588.46802
[2026-03-10 10:33:12] 2026-03-10 14:32:20,551 | INFO     | sum of deviations: 83324276849.804
[2026-03-10 10:33:12] 2026-03-10 14:32:20,552 | INFO     | mean x: 1773132087.7793903
[2026-03-10 10:33:12] 2026-03-10 14:32:20,552 | INFO     | mean y: 2529379.6763425255
[2026-03-10 10:33:12] 2026-03-10 14:32:20,552 | INFO     | intersect: -1454233241.90395
[2026-03-10 10:33:12] 2026-03-10 14:32:20,553 | INFO     | chi2: 0.11078120095500821
[2026-03-10 10:33:12] 2026-03-10 14:32:20,553 | INFO     | current chi2=0.11078120095500821 (change=10.890719795276933 %)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,553 | INFO     | left removable region: 50
[2026-03-10 10:33:12] 2026-03-10 14:32:20,554 | INFO     | sum of square deviations: 88336977801.55688
[2026-03-10 10:33:12] 2026-03-10 14:32:20,597 | INFO     | sum of deviations: 106244082122.96971
[2026-03-10 10:33:12] 2026-03-10 14:32:20,597 | INFO     | mean x: 1773132667.2902737
[2026-03-10 10:33:12] 2026-03-10 14:32:20,598 | INFO     | mean y: 2527180.0577507596
[2026-03-10 10:33:12] 2026-03-10 14:32:20,598 | INFO     | intersect: -2130043544.08115
[2026-03-10 10:33:12] 2026-03-10 14:32:20,603 | INFO     | chi2: 0.0068497270933287726
[2026-03-10 10:33:12] 2026-03-10 14:32:20,603 | INFO     | current memory leak: 1.20 B/s (using 658 data points, chi2=0.01)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | could have reported an average CPU frequency of 2903 MHz (28 samples)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | ..............................
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . Timing measurements:
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . get job = 0 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . initial setup = 40 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . payload setup = 43 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . stage-in = 0 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . payload execution = 43582 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . stage-out = 5 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,604 | INFO     | . log creation = 1 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,605 | INFO     | ..............................
[2026-03-10 10:33:12] 2026-03-10 14:32:20,732 | INFO     | PID=1913700 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 10:33:12] 2026-03-10 14:32:20,732 | INFO     | .. there are 23 such processes running
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | 
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | job summary report
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | --------------------------------------------------
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | PanDA job id: 7035613253
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | task id: 48844810
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | errors: (none)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | pilot state: finished 
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | transexitcode: 0
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | exeerrorcode: 0
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | exeerrordiag: 
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | exitcode: 0
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | exitmsg: OK
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | cpuconsumptiontime: 48662 s
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | nevents: 400
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | neventsw: 0
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | pid: 1926432
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | pgrp: 1926432
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | corecount: 8
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | event service: False
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | sizes: {0: 2279217, 1: 2279818, 2: 2280303, 3: 2280303, 4: 2280391, 14: 2280391, 43630: 2324919, 43636: 2333917, 43637: 2333973, 43638: 2334167}
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | --------------------------------------------------
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | 
[2026-03-10 10:33:12] 2026-03-10 14:32:20,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-10 10:33:12] 2026-03-10 14:32:20,969 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | job 7035613253 has completed (purged errors)
[2026-03-10 10:33:12] 2026-03-10 14:32:20,971 | INFO     | overall cleanup function is called
[2026-03-10 10:33:12] 2026-03-10 14:32:21,984 | INFO     | --- collectZombieJob: --- 10, [1926432]
[2026-03-10 10:33:12] 2026-03-10 14:32:21,984 | INFO     | zombie collector waiting for pid 1926432
[2026-03-10 10:33:12] 2026-03-10 14:32:21,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 10:33:12] 2026-03-10 14:32:21,985 | INFO     | collected zombie processes
[2026-03-10 10:33:12] 2026-03-10 14:32:21,985 | INFO     | will attempt to kill all subprocesses of pid=1926432
[2026-03-10 10:33:12] 2026-03-10 14:32:22,380 | INFO     | process IDs to be killed: [1926432] (in reverse order)
[2026-03-10 10:33:12] 2026-03-10 14:32:22,774 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 10:33:12] 2026-03-10 14:32:22,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 10:33:12] 2026-03-10 14:32:22,812 | INFO     | did not find any defunct processes belonging to 1926432
[2026-03-10 10:33:12] 2026-03-10 14:32:22,915 | INFO     | did not find any defunct processes belonging to 1926432
[2026-03-10 10:33:12] 2026-03-10 14:32:22,916 | INFO     | ready for new job
[2026-03-10 10:33:12] 2026-03-10 14:32:22,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 10:33:12] 2026-03-10 14:32:22,953 | INFO     | **************************************
[2026-03-10 10:33:12] 2026-03-10 14:32:22,953 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 10:33:12] 2026-03-10 14:32:22,953 | INFO     | **************************************
[2026-03-10 10:33:12] 2026-03-10 14:32:22,953 | INFO     | 
[2026-03-10 10:33:12] 2026-03-10 14:32:22,964 | INFO     | architecture information:
[2026-03-10 10:33:12] 2026-03-10 14:32:22,988 | INFO     | executing command: cat /etc/os-release
[2026-03-10 10:33:12] 2026-03-10 14:32:23,123 | INFO     | cat /etc/os-release:
[2026-03-10 10:33:12] NAME="CentOS Linux"
[2026-03-10 10:33:12] VERSION="7 (Core)"
[2026-03-10 10:33:12] ID="centos"
[2026-03-10 10:33:12] ID_LIKE="rhel fedora"
[2026-03-10 10:33:12] VERSION_ID="7"
[2026-03-10 10:33:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 10:33:12] ANSI_COLOR="0;31"
[2026-03-10 10:33:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 10:33:12] HOME_URL="https://www.centos.org/"
[2026-03-10 10:33:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 10:33:12] 
[2026-03-10 10:33:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 10:33:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 10:33:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 10:33:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 10:33:12] 
[2026-03-10 10:33:12] 2026-03-10 14:32:23,124 | INFO     | **************************************
[2026-03-10 10:33:12] 2026-03-10 14:32:23,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-10 10:33:12] 2026-03-10 14:32:23,738 | INFO     | sufficient remaining disk space (74237083648 B)
[2026-03-10 10:33:12] 2026-03-10 14:32:23,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 10:33:12] 2026-03-10 14:32:23,743 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 10:33:12] 2026-03-10 14:32:23,743 | INFO     | update_server=False
[2026-03-10 10:33:12] 2026-03-10 14:32:23,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 10:33:12] 2026-03-10 14:32:23,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:33:12] 2026-03-10 14:32:23,746 | INFO     | aborting loop
[2026-03-10 10:33:12] 2026-03-10 14:32:23,921 | INFO     | all job control threads have been joined
[2026-03-10 10:33:12] 2026-03-10 14:32:24,108 | INFO     | all data control threads have been joined
[2026-03-10 10:33:12] 2026-03-10 14:32:24,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 10:33:12] 2026-03-10 14:32:24,749 | INFO     | [job] retrieve thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:24,753 | INFO     | [job] job monitor thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:24,940 | INFO     | [job] control thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,056 | INFO     | all payload control threads have been joined
[2026-03-10 10:33:12] 2026-03-10 14:32:25,114 | INFO     | [data] control thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,128 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,152 | INFO     | [data] copytool_in thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,153 | INFO     | [job] validate thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,505 | INFO     | [payload] validate_post thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:25,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:33:12] 2026-03-10 14:32:25,974 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:26,063 | INFO     | [payload] control thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:26,092 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:26,134 | INFO     | [payload] failed_post thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:26,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 10:33:12] 2026-03-10 14:32:26,473 | INFO     | [data] copytool_out thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:26,789 | INFO     | [job] queue monitor thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:30,320 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 10:33:12] 2026-03-10 14:32:53,466 | INFO     | PID=1913700 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 10:33:12] 2026-03-10 14:32:53,468 | INFO     | .. there are 23 such processes running
[2026-03-10 10:33:12] 2026-03-10 14:32:53,468 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 10:33:12] 2026-03-10 14:32:53,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 10:33:12] 2026-03-10 14:32:53,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 10:33:12] 2026-03-10 14:33:05,213 | INFO     | [monitor] cgroup control has ended
[2026-03-10 10:33:12] 2026-03-10 14:33:06,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101131061056)>', '<ExcThread(monitor, started 140100423907072)>']
[2026-03-10 10:33:12] 2026-03-10 14:33:06,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 10:33:12] 2026-03-10 14:33:06,553 | INFO     | [monitor] control thread has ended
[2026-03-10 10:33:12] 2026-03-10 14:33:11,135 | INFO     | all workflow threads have been joined
[2026-03-10 10:33:12] 2026-03-10 14:33:11,135 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 10:33:12] 2026-03-10 14:33:11,136 | INFO     | traces error code: 0
[2026-03-10 10:33:12] 2026-03-10 14:33:11,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 10:33:12] 2026-03-10 14:33:11,795 [wrapper] ==== pilot stdout END ====
[2026-03-10 10:33:12] 2026-03-10 14:33:11,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 10:33:12] 2026-03-10 14:33:11,882 [wrapper] pilotpid: 1913700
[2026-03-10 10:33:12] 2026-03-10 14:33:11,927 [wrapper] Pilot exit status: 0
[2026-03-10 10:33:12] 2026-03-10 14:33:12,051 [wrapper] pandaids: 7035613253
[2026-03-10 10:33:12] 2026-03-10 14:33:12,341 [wrapper] cleanup supervisor_pilot 4118490 1913701
[2026-03-10 10:33:12] 2026-03-10 14:33:12,376 [wrapper] Test setup, not cleaning
[2026-03-10 10:33:12] 2026-03-10 14:33:12,404 [wrapper] apfmon messages muted
[2026-03-10 10:33:12] 2026-03-10 14:33:12,450 [wrapper] ==== wrapper stdout END ====
[2026-03-10 10:33:12] 2026-03-10 14:33:12,469 [wrapper] ==== wrapper stderr END ====
[2026-03-10 10:33:12]  *** Error codes and diagnostics ***
[2026-03-10 10:33:12]     "exeErrorCode": 0,
[2026-03-10 10:33:12]     "exeErrorDiag": "",
[2026-03-10 10:33:12]     "pilotErrorCode": 0,
[2026-03-10 10:33:12]     "pilotErrorDiag": "",
[2026-03-10 10:33:12]  *** Listing of results directory ***
[2026-03-10 10:33:13] total 418988
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 17:23 pilot3.tar.gz
[2026-03-10 10:33:13] -rwx------. 1 boincer umatlas     36322 Mar  1 17:24 runpilot2-wrapper.sh
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 17:25 queuedata.json
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas       100 Mar  9 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 10:33:13] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 22:22 run_atlas
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas       105 Mar  9 22:22 job.xml
[2026-03-10 10:33:13] -rw-r--r--. 2 boincer umatlas 236570888 Mar  9 22:22 EVNT.48454291._000001.pool.root.1
[2026-03-10 10:33:13] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 22:22 start_atlas.sh
[2026-03-10 10:33:13] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 22:22 shared
[2026-03-10 10:33:13] -rw-r--r--. 2 boincer umatlas    597960 Mar  9 22:22 input.tar.gz
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas         0 Mar  9 22:22 boinc_lockfile
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas      2625 Mar  9 22:22 pandaJob.out
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas        57 Mar  9 22:22 setup.sh.local
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas   1002338 Mar  9 22:24 agis_schedconf.cvmfs.json
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas       441 Mar  9 22:24 workernode_map.json
[2026-03-10 10:33:13] drwx------. 5 boincer umatlas      4096 Mar  9 22:24 pilot3
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas      6843 Mar 10 10:27 init_data.xml
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas 175893656 Mar 10 10:31 HITS.48844810._000001.pool.root.1
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas       531 Mar 10 10:31 boinc_task_state.xml
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas        95 Mar 10 10:32 pilot_heartbeat.json
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas      1043 Mar 10 10:32 memory_monitor_summary.json
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas   1511578 Mar 10 10:32 agis_ddmendpoints.agis.ALL.json
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas    819243 Mar 10 10:32 log.48844810._000001.job.log.tgz.1
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas      6366 Mar 10 10:32 heartbeat.json
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas        28 Mar 10 10:32 wrapper_checkpoint.txt
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 10:32 boinc_mmap_file
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas      4820 Mar 10 10:33 pilotlog.txt
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas   5504285 Mar 10 10:33 log.48844810._000001.job.log.1
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas       357 Mar 10 10:33 output.list
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas       620 Mar 10 10:33 runtime_log
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas   6338560 Mar 10 10:33 result.tar.gz
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas      9342 Mar 10 10:33 runtime_log.err
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas       658 Mar 10 10:33 4GmLDmwN4G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgpBLDm9oM75n.diag
[2026-03-10 10:33:13] -rw-r--r--. 1 boincer umatlas     21177 Mar 10 10:33 stderr.txt
[2026-03-10 10:33:13] HITS file was successfully produced:
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas 175893656 Mar 10 10:31 shared/HITS.pool.root.1
[2026-03-10 10:33:13]  *** Contents of shared directory: ***
[2026-03-10 10:33:13] total 409596
[2026-03-10 10:33:13] -rw-r--r--. 2 boincer umatlas 236570888 Mar  9 22:22 ATLAS.root_0
[2026-03-10 10:33:13] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 22:22 start_atlas.sh
[2026-03-10 10:33:13] -rw-r--r--. 2 boincer umatlas    597960 Mar  9 22:22 input.tar.gz
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas 175893656 Mar 10 10:31 HITS.pool.root.1
[2026-03-10 10:33:13] -rw-------. 1 boincer umatlas   6338560 Mar 10 10:33 result.tar.gz
10:33:14 (1904334): run_atlas exited; CPU time 50346.724059
10:33:14 (1904334): called boinc_finish(0)

</stderr_txt>
]]>

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