Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:34:35 (175304): wrapper (7.7.26015): starting
18:34:35 (175304): wrapper: running run_atlas (--nthreads 2)
[2026-03-10 18:34:35] Arguments: --nthreads 2
[2026-03-10 18:34:35] Threads: 2
[2026-03-10 18:34:35] Checking for CVMFS
[2026-03-10 18:34:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 18:34:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 18:34:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 18:34:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 18:34:35] 2.9.2.0 2629748 18767 62200 157125 1 50 32034658 36864001 0 130560 0 4970577 99.975 705508 14165 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 18:34:35] CVMFS is ok
[2026-03-10 18:34:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 18:34:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 18:34:35] Further information can be found at the LHC@home message board.
[2026-03-10 18:34:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 18:34:35] Checking for apptainer binary...
[2026-03-10 18:34:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 18:34:35] Running /usr/bin/apptainer --version
[2026-03-10 18:34:35] apptainer version 1.4.2-1.1
[2026-03-10 18:34:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 18:34:35] itA173
[2026-03-10 18:34:35] apptainer works
[2026-03-10 18:34:35] Set ATHENA_PROC_NUMBER=2
[2026-03-10 18:34:35] Set ATHENA_CORE_NUMBER=2
[2026-03-10 18:34:35] Starting ATLAS job with PandaID=7047738949
[2026-03-10 18:34:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 21:40:16]  *** The last 200 lines of the pilot log: ***
[2026-03-10 21:40:16] 2026-03-10 20:39:35,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,404 | INFO     | log transfer has been attempted: DONE
[2026-03-10 21:40:16] 2026-03-10 20:39:35,404 | INFO     | job 7047738949 has finished - writing final server update
[2026-03-10 21:40:16] 2026-03-10 20:39:35,404 | INFO     | total number of processed events: 400 (read)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,405 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7047738949/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,405 | INFO     | extracted standard info from prmon json
[2026-03-10 21:40:16] 2026-03-10 20:39:35,405 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 21:40:16] 2026-03-10 20:39:35,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 21:40:16] 2026-03-10 20:39:35,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 21:40:16] 2026-03-10 20:39:35,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 21:40:16] 2026-03-10 20:39:35,406 | INFO     | fitting pss+swap vs Time
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | sum of square deviations: 1869302025.5
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | sum of deviations: -31297395202.5
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | mean x: 1773169638.5
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | mean y: 2344357.510989011
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | intersect: 29690211903.882812
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | chi2: 2.302334188822748
[2026-03-10 21:40:16] 2026-03-10 20:39:35,407 | INFO     | sum of square deviations: 1719429448.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | sum of deviations: -20098208935.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | mean x: 1773169486.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | mean y: 2355524.627118644
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | intersect: 20728725454.051846
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | chi2: 1.6752596185445967
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | current chi2=1.6752596185445967 (change=27.236470418692488 %)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,408 | INFO     | sum of square deviations: 1577789583.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | sum of deviations: -19149865389.500004
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | mean x: 1773169333.5
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | mean y: 2356545.9709302327
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | intersect: 21523574847.305374
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | chi2: 1.6725186949069721
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | current chi2=1.6725186949069721 (change=0.16361187288724738 %)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | right removable region: 171
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | sum of square deviations: 1719429448.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | sum of deviations: -53977657918.00001
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | mean x: 1773169791.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | mean y: 2367055.757062147
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | intersect: 55667083348.97805
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | chi2: 0.8647384163730167
[2026-03-10 21:40:16] 2026-03-10 20:39:35,409 | INFO     | current chi2=0.8647384163730167 (change=62.44079506046065 %)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | sum of square deviations: 1577789583.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | sum of deviations: -45575963218.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | mean x: 1773169943.5
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | mean y: 2358004.7790697673
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | intersect: 51222070059.51326
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | chi2: 0.8407835563376215
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | current chi2=0.8407835563376215 (change=2.7701857095547386 %)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | left removable region: 20
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | sum of square deviations: 1067554900.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,410 | INFO     | sum of deviations: -17501007176.999996
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | mean x: 1773169913.0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | mean y: 2351108.390728477
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | intersect: 29070888355.003017
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | chi2: 0.09957451092359126
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | current memory leak: -16.39 B/s (using 151 data points, chi2=0.10)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | could have reported an average CPU frequency of 4493 MHz (10 samples)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | ..............................
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . Timing measurements:
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . get job = 0 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . initial setup = 7 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . payload setup = 9 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . stage-in = 0 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . payload execution = 11051 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . stage-out = 0 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | . log creation = 0 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,411 | INFO     | ..............................
[2026-03-10 21:40:16] 2026-03-10 20:39:35,680 | INFO     | 
[2026-03-10 21:40:16] 2026-03-10 20:39:35,681 | INFO     | job summary report
[2026-03-10 21:40:16] 2026-03-10 20:39:35,681 | INFO     | --------------------------------------------------
[2026-03-10 21:40:16] 2026-03-10 20:39:35,681 | INFO     | PanDA job id: 7047738949
[2026-03-10 21:40:16] 2026-03-10 20:39:35,681 | INFO     | task id: 48998032
[2026-03-10 21:40:16] 2026-03-10 20:39:35,682 | INFO     | errors: (none)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 21:40:16] 2026-03-10 20:39:35,682 | INFO     | pilot state: finished 
[2026-03-10 21:40:16] 2026-03-10 20:39:35,682 | INFO     | transexitcode: 0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,682 | INFO     | exeerrorcode: 0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,682 | INFO     | exeerrordiag: 
[2026-03-10 21:40:16] 2026-03-10 20:39:35,683 | INFO     | exitcode: 0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,683 | INFO     | exitmsg: OK
[2026-03-10 21:40:16] 2026-03-10 20:39:35,683 | INFO     | cpuconsumptiontime: 21631 s
[2026-03-10 21:40:16] 2026-03-10 20:39:35,683 | INFO     | nevents: 400
[2026-03-10 21:40:16] 2026-03-10 20:39:35,683 | INFO     | neventsw: 0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,683 | INFO     | pid: 183739
[2026-03-10 21:40:16] 2026-03-10 20:39:35,684 | INFO     | pgrp: 183739
[2026-03-10 21:40:16] 2026-03-10 20:39:35,684 | INFO     | corecount: 2
[2026-03-10 21:40:16] 2026-03-10 20:39:35,684 | INFO     | event service: False
[2026-03-10 21:40:16] 2026-03-10 20:39:35,684 | INFO     | sizes: {0: 2280235, 11: 2280235, 11064: 2309608, 11065: 2318612, 11068: 2318668, 11069: 2318862}
[2026-03-10 21:40:16] 2026-03-10 20:39:35,684 | INFO     | --------------------------------------------------
[2026-03-10 21:40:16] 2026-03-10 20:39:35,684 | INFO     | 
[2026-03-10 21:40:16] 2026-03-10 20:39:35,685 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-10 21:40:16] 2026-03-10 20:39:35,696 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | job 7047738949 has completed (purged errors)
[2026-03-10 21:40:16] 2026-03-10 20:39:35,697 | INFO     | overall cleanup function is called
[2026-03-10 21:40:16] 2026-03-10 20:39:36,698 | INFO     | --- collectZombieJob: --- 10, [183739]
[2026-03-10 21:40:16] 2026-03-10 20:39:36,699 | INFO     | zombie collector waiting for pid 183739
[2026-03-10 21:40:16] 2026-03-10 20:39:36,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 21:40:16] 2026-03-10 20:39:36,699 | INFO     | collected zombie processes
[2026-03-10 21:40:16] 2026-03-10 20:39:36,700 | INFO     | will attempt to kill all subprocesses of pid=183739
[2026-03-10 21:40:16] 2026-03-10 20:39:36,736 | INFO     | process IDs to be killed: [183739] (in reverse order)
[2026-03-10 21:40:16] 2026-03-10 20:39:36,758 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 21:40:16] 2026-03-10 20:39:36,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 21:40:16] 2026-03-10 20:39:36,759 | INFO     | did not find any defunct processes belonging to 183739
[2026-03-10 21:40:16] 2026-03-10 20:39:36,760 | INFO     | did not find any defunct processes belonging to 183739
[2026-03-10 21:40:16] 2026-03-10 20:39:36,760 | INFO     | ready for new job
[2026-03-10 21:40:16] 2026-03-10 20:39:36,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 21:40:16] 2026-03-10 20:39:36,761 | INFO     | **************************************
[2026-03-10 21:40:16] 2026-03-10 20:39:36,761 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 21:40:16] 2026-03-10 20:39:36,761 | INFO     | **************************************
[2026-03-10 21:40:16] 2026-03-10 20:39:36,761 | INFO     | 
[2026-03-10 21:40:16] 2026-03-10 20:39:36,761 | INFO     | architecture information:
[2026-03-10 21:40:16] 2026-03-10 20:39:36,761 | INFO     | executing command: cat /etc/os-release
[2026-03-10 21:40:16] 2026-03-10 20:39:36,769 | INFO     | cat /etc/os-release:
[2026-03-10 21:40:16] NAME="CentOS Linux"
[2026-03-10 21:40:16] VERSION="7 (Core)"
[2026-03-10 21:40:16] ID="centos"
[2026-03-10 21:40:16] ID_LIKE="rhel fedora"
[2026-03-10 21:40:16] VERSION_ID="7"
[2026-03-10 21:40:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 21:40:16] ANSI_COLOR="0;31"
[2026-03-10 21:40:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 21:40:16] HOME_URL="https://www.centos.org/"
[2026-03-10 21:40:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 21:40:16] 
[2026-03-10 21:40:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 21:40:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 21:40:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 21:40:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 21:40:16] 
[2026-03-10 21:40:16] 2026-03-10 20:39:36,769 | INFO     | **************************************
[2026-03-10 21:40:16] 2026-03-10 20:39:37,273 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-10 21:40:16] 2026-03-10 20:39:37,284 | INFO     | sufficient remaining disk space (225698643968 B)
[2026-03-10 21:40:16] 2026-03-10 20:39:37,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 21:40:16] 2026-03-10 20:39:37,284 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 21:40:16] 2026-03-10 20:39:37,284 | INFO     | update_server=False
[2026-03-10 21:40:16] 2026-03-10 20:39:37,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 21:40:16] 2026-03-10 20:39:37,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:40:16] 2026-03-10 20:39:37,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:40:16] 2026-03-10 20:39:37,947 | INFO     | aborting loop
[2026-03-10 21:40:16] 2026-03-10 20:39:38,055 | INFO     | all payload control threads have been joined
[2026-03-10 21:40:16] 2026-03-10 20:39:38,076 | INFO     | all data control threads have been joined
[2026-03-10 21:40:16] 2026-03-10 20:39:38,290 | INFO     | [job] retrieve thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:38,291 | INFO     | [job] queue monitor thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:38,413 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:38,542 | INFO     | [data] copytool_in thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:38,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 21:40:16] 2026-03-10 20:39:38,706 | INFO     | [payload] validate_post thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:38,827 | INFO     | all job control threads have been joined
[2026-03-10 21:40:16] 2026-03-10 20:39:38,953 | INFO     | [job] job monitor thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:38,985 | INFO     | [payload] failed_post thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:39,061 | INFO     | [payload] control thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:39,082 | INFO     | [data] control thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:39,678 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:39,699 | INFO     | [job] validate thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:39,782 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:39,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 21:40:16] 2026-03-10 20:39:39,833 | INFO     | [job] control thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:40,557 | INFO     | [data] copytool_out thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:43,816 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:39:47,643 | INFO     | job.realtimelogging is not enabled
[2026-03-10 21:40:16] 2026-03-10 20:39:48,649 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 21:40:16] 2026-03-10 20:40:07,516 | INFO     | PID=179331 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 21:40:16] 2026-03-10 20:40:07,516 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 21:40:16] 2026-03-10 20:40:07,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 21:40:16] 2026-03-10 20:40:07,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 21:40:16] 2026-03-10 20:40:09,550 | INFO     | [monitor] cgroup control has ended
[2026-03-10 21:40:16] 2026-03-10 20:40:11,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388701968192)>', '<ExcThread(monitor, started 140387825993472)>']
[2026-03-10 21:40:16] 2026-03-10 20:40:12,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 21:40:16] 2026-03-10 20:40:12,539 | INFO     | [monitor] control thread has ended
[2026-03-10 21:40:16] 2026-03-10 20:40:16,605 | INFO     | all workflow threads have been joined
[2026-03-10 21:40:16] 2026-03-10 20:40:16,605 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 21:40:16] 2026-03-10 20:40:16,606 | INFO     | traces error code: 0
[2026-03-10 21:40:16] 2026-03-10 20:40:16,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 21:40:16] 2026-03-10 20:40:16,649 [wrapper] ==== pilot stdout END ====
[2026-03-10 21:40:16] 2026-03-10 20:40:16,651 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 21:40:16] 2026-03-10 20:40:16,653 [wrapper] pilotpid: 179331
[2026-03-10 21:40:16] 2026-03-10 20:40:16,655 [wrapper] Pilot exit status: 0
[2026-03-10 21:40:16] 2026-03-10 20:40:16,660 [wrapper] pandaids: 7047738949
[2026-03-10 21:40:16] 2026-03-10 20:40:16,672 [wrapper] cleanup supervisor_pilot  189334 179332
[2026-03-10 21:40:16] 2026-03-10 20:40:16,675 [wrapper] Test setup, not cleaning
[2026-03-10 21:40:16] 2026-03-10 20:40:16,677 [wrapper] apfmon messages muted
[2026-03-10 21:40:16] 2026-03-10 20:40:16,679 [wrapper] ==== wrapper stdout END ====
[2026-03-10 21:40:16] 2026-03-10 20:40:16,681 [wrapper] ==== wrapper stderr END ====
[2026-03-10 21:40:16]  *** Error codes and diagnostics ***
[2026-03-10 21:40:16]     "exeErrorCode": 0,
[2026-03-10 21:40:16]     "exeErrorDiag": "",
[2026-03-10 21:40:16]     "pilotErrorCode": 0,
[2026-03-10 21:40:16]     "pilotErrorDiag": "",
[2026-03-10 21:40:16]  *** Listing of results directory ***
[2026-03-10 21:40:16] total 647792
[2026-03-10 21:40:16] -rwx------ 1 boinc boinc     36322 Mar  9 21:45 runpilot2-wrapper.sh
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc      5111 Mar  9 21:46 queuedata.json
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc    584627 Mar  9 21:46 pilot3.tar.gz
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc       100 Mar 10 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 21:40:16] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 18:34 run_atlas
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc       105 Mar 10 18:34 job.xml
[2026-03-10 21:40:16] -rw-r--r-- 2 boinc boinc 364744799 Mar 10 18:34 EVNT.48998030._000066.pool.root.1
[2026-03-10 21:40:16] -rw-r--r-- 2 boinc boinc    597943 Mar 10 18:34 input.tar.gz
[2026-03-10 21:40:16] -rw-r--r-- 2 boinc boinc     15845 Mar 10 18:34 start_atlas.sh
[2026-03-10 21:40:16] drwxrwx--x 2 boinc boinc      4096 Mar 10 18:34 shared
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc         0 Mar 10 18:34 boinc_setup_complete
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc      6280 Mar 10 18:34 init_data.xml
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc         0 Mar 10 18:34 boinc_lockfile
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc      2560 Mar 10 18:34 pandaJob.out
[2026-03-10 21:40:16] -rw------- 1 boinc boinc   1006702 Mar 10 18:34 agis_schedconf.cvmfs.json
[2026-03-10 21:40:16] -rw------- 1 boinc boinc       417 Mar 10 18:34 workernode_map.json
[2026-03-10 21:40:16] drwx------ 5 boinc boinc      4096 Mar 10 18:34 pilot3
[2026-03-10 21:40:16] -rw------- 1 boinc boinc 290842377 Mar 10 21:39 HITS.48998032._001647.pool.root.1
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc       531 Mar 10 21:39 boinc_task_state.xml
[2026-03-10 21:40:16] -rw------- 1 boinc boinc      1017 Mar 10 21:39 memory_monitor_summary.json
[2026-03-10 21:40:16] -rw------- 1 boinc boinc   1511578 Mar 10 21:39 agis_ddmendpoints.agis.ALL.json
[2026-03-10 21:40:16] -rw------- 1 boinc boinc    333771 Mar 10 21:39 log.48998032._001647.job.log.tgz.1
[2026-03-10 21:40:16] -rw------- 1 boinc boinc      6298 Mar 10 21:39 heartbeat.json
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc      8192 Mar 10 21:39 boinc_mmap_file
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc        28 Mar 10 21:39 wrapper_checkpoint.txt
[2026-03-10 21:40:16] -rw------- 1 boinc boinc        95 Mar 10 21:40 pilot_heartbeat.json
[2026-03-10 21:40:16] -rw------- 1 boinc boinc      4819 Mar 10 21:40 pilotlog.txt
[2026-03-10 21:40:16] -rw------- 1 boinc boinc   1569538 Mar 10 21:40 log.48998032._001647.job.log.1
[2026-03-10 21:40:16] -rw------- 1 boinc boinc       357 Mar 10 21:40 output.list
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc       620 Mar 10 21:40 runtime_log
[2026-03-10 21:40:16] -rw------- 1 boinc boinc   1925120 Mar 10 21:40 result.tar.gz
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc      8897 Mar 10 21:40 runtime_log.err
[2026-03-10 21:40:16] -rw------- 1 boinc boinc       660 Mar 10 21:40 RVaNDm1ewJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDodLDmGMm4nm.diag
[2026-03-10 21:40:16] -rw-r--r-- 1 boinc boinc     21026 Mar 10 21:40 stderr.txt
[2026-03-10 21:40:16] HITS file was successfully produced:
[2026-03-10 21:40:16] -rw------- 1 boinc boinc 290842377 Mar 10 21:39 shared/HITS.pool.root.1
[2026-03-10 21:40:16]  *** Contents of shared directory: ***
[2026-03-10 21:40:16] total 642716
[2026-03-10 21:40:16] -rw-r--r-- 2 boinc boinc 364744799 Mar 10 18:34 ATLAS.root_0
[2026-03-10 21:40:16] -rw-r--r-- 2 boinc boinc    597943 Mar 10 18:34 input.tar.gz
[2026-03-10 21:40:16] -rw-r--r-- 2 boinc boinc     15845 Mar 10 18:34 start_atlas.sh
[2026-03-10 21:40:16] -rw------- 1 boinc boinc 290842377 Mar 10 21:39 HITS.pool.root.1
[2026-03-10 21:40:16] -rw------- 1 boinc boinc   1925120 Mar 10 21:40 result.tar.gz
21:40:18 (175304): run_atlas exited; CPU time 21684.472225
21:40:18 (175304): called boinc_finish(0)

</stderr_txt>
]]>

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