Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:31 (1499225): wrapper (7.7.26015): starting
00:04:31 (1499225): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 00:04:32] Arguments: --nthreads 8
[2026-03-10 00:04:32] Threads: 8
[2026-03-10 00:04:32] Checking for CVMFS
[2026-03-10 00:04:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 00:04:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 00:04:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 00:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 00:04:33] 2.13.3.0 6950 107388 205464 157100 1 90 27138366 39288832 7136 16776704 0 61678324 99.723 61034649 37923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 00:04:33] CVMFS is ok
[2026-03-10 00:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 00:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 00:04:33] Further information can be found at the LHC@home message board.
[2026-03-10 00:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 00:04:33] Checking for apptainer binary...
[2026-03-10 00:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 00:04:33] Running /usr/bin/apptainer --version
[2026-03-10 00:04:33] apptainer version 1.4.5-2.el9
[2026-03-10 00:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 00:04:33] c-210-30.aglt2.org
[2026-03-10 00:04:33] apptainer works
[2026-03-10 00:04:33] Set ATHENA_PROC_NUMBER=8
[2026-03-10 00:04:33] Set ATHENA_CORE_NUMBER=8
[2026-03-10 00:04:33] Starting ATLAS job with PandaID=7041527685
[2026-03-10 00:04:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 12:12:15]  *** The last 200 lines of the pilot log: ***
[2026-03-10 12:12:15] 2026-03-10 15:05:55,528 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7041527685/jobReport.json
[2026-03-10 12:12:15] 2026-03-10 15:05:55,832 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-03-10 12:12:15] 2026-03-10 15:05:55,832 | INFO     | this job has now completed (state=finished)
[2026-03-10 12:12:15] 2026-03-10 15:05:55,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 12:12:15] 2026-03-10 15:05:55,832 | INFO     | log transfer has been attempted: DONE
[2026-03-10 12:12:15] 2026-03-10 15:05:55,832 | INFO     | job 7041527685 has finished - writing final server update
[2026-03-10 12:12:15] 2026-03-10 15:05:55,833 | INFO     | total number of processed events: 400 (read)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,022 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7041527685/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,023 | INFO     | extracted standard info from prmon json
[2026-03-10 12:12:15] 2026-03-10 15:05:56,023 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 12:12:15] 2026-03-10 15:05:56,023 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 12:12:15] 2026-03-10 15:05:56,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 12:12:15] 2026-03-10 15:05:56,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 12:12:15] 2026-03-10 15:05:56,147 | INFO     | fitting pss+swap vs Time
[2026-03-10 12:12:15] 2026-03-10 15:05:56,170 | INFO     | sum of square deviations: 84765459751.96901
[2026-03-10 12:12:15] 2026-03-10 15:05:56,259 | INFO     | sum of deviations: 224837585630.64545
[2026-03-10 12:12:15] 2026-03-10 15:05:56,259 | INFO     | mean x: 1773135330.4791987
[2026-03-10 12:12:15] 2026-03-10 15:05:56,259 | INFO     | mean y: 2492406.010785824
[2026-03-10 12:12:15] 2026-03-10 15:05:56,259 | INFO     | intersect: -4700690563.418918
[2026-03-10 12:12:15] 2026-03-10 15:05:56,260 | INFO     | chi2: 2.8880701302883023
[2026-03-10 12:12:15] 2026-03-10 15:05:56,304 | INFO     | sum of square deviations: 82821579086.87465
[2026-03-10 12:12:15] 2026-03-10 15:05:56,353 | INFO     | sum of deviations: 262486812210.7159
[2026-03-10 12:12:15] 2026-03-10 15:05:56,354 | INFO     | mean x: 1773135177.9860249
[2026-03-10 12:12:15] 2026-03-10 15:05:56,354 | INFO     | mean y: 2495339.635093168
[2026-03-10 12:12:15] 2026-03-10 15:05:56,354 | INFO     | intersect: -5617110149.895972
[2026-03-10 12:12:15] 2026-03-10 15:05:56,355 | INFO     | chi2: 2.201133362113692
[2026-03-10 12:12:15] 2026-03-10 15:05:56,355 | INFO     | current chi2=2.201133362113692 (change=23.785321587950385 %)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,355 | INFO     | right removable region: 643
[2026-03-10 12:12:15] 2026-03-10 15:05:56,460 | INFO     | sum of square deviations: 82820953513.99413
[2026-03-10 12:12:15] 2026-03-10 15:05:56,484 | INFO     | sum of deviations: 79797636018.52487
[2026-03-10 12:12:15] 2026-03-10 15:05:56,484 | INFO     | mean x: 1773135482.9968944
[2026-03-10 12:12:15] 2026-03-10 15:05:56,484 | INFO     | mean y: 2503758.7624223605
[2026-03-10 12:12:15] 2026-03-10 15:05:56,484 | INFO     | intersect: -1705904728.225231
[2026-03-10 12:12:15] 2026-03-10 15:05:56,485 | INFO     | chi2: 0.7522907984639396
[2026-03-10 12:12:15] 2026-03-10 15:05:56,486 | INFO     | current chi2=0.7522907984639396 (change=73.95178217542653 %)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,486 | INFO     | sum of square deviations: 80906557985.70256
[2026-03-10 12:12:15] 2026-03-10 15:05:56,513 | INFO     | sum of deviations: 55219927905.45226
[2026-03-10 12:12:15] 2026-03-10 15:05:56,513 | INFO     | mean x: 1773135635.5086071
[2026-03-10 12:12:15] 2026-03-10 15:05:56,513 | INFO     | mean y: 2505713.463223787
[2026-03-10 12:12:15] 2026-03-10 15:05:56,514 | INFO     | intersect: -1207685702.3757272
[2026-03-10 12:12:15] 2026-03-10 15:05:56,514 | INFO     | chi2: 0.7007830789407556
[2026-03-10 12:12:15] 2026-03-10 15:05:56,515 | INFO     | current chi2=0.7007830789407556 (change=6.846783136036587 %)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,515 | INFO     | left removable region: 20
[2026-03-10 12:12:15] 2026-03-10 15:05:56,516 | INFO     | sum of square deviations: 74979934941.13954
[2026-03-10 12:12:15] 2026-03-10 15:05:56,540 | INFO     | sum of deviations: 82823326344.35315
[2026-03-10 12:12:15] 2026-03-10 15:05:56,540 | INFO     | mean x: 1773135757.5313
[2026-03-10 12:12:15] 2026-03-10 15:05:56,540 | INFO     | mean y: 2509613.6998394863
[2026-03-10 12:12:15] 2026-03-10 15:05:56,540 | INFO     | intersect: -1956107736.5838308
[2026-03-10 12:12:15] 2026-03-10 15:05:56,541 | INFO     | chi2: 0.0040688429155388405
[2026-03-10 12:12:15] 2026-03-10 15:05:56,542 | INFO     | current memory leak: 1.10 B/s (using 623 data points, chi2=0.00)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,542 | INFO     | could have reported an average CPU frequency of 2599 MHz (25 samples)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,542 | INFO     | ..............................
[2026-03-10 12:12:15] 2026-03-10 15:05:56,543 | INFO     | . Timing measurements:
[2026-03-10 12:12:15] 2026-03-10 15:05:56,543 | INFO     | . get job = 0 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,548 | INFO     | . initial setup = 19 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,548 | INFO     | . payload setup = 20 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,548 | INFO     | . stage-in = 0 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,548 | INFO     | . payload execution = 39588 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,548 | INFO     | . stage-out = 5 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,548 | INFO     | . log creation = 0 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,549 | INFO     | ..............................
[2026-03-10 12:12:15] 2026-03-10 15:05:56,746 | INFO     | PID=1514506 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 12:12:15] 2026-03-10 15:05:56,746 | INFO     | .. there are 9 such processes running
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | 
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | job summary report
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | --------------------------------------------------
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | PanDA job id: 7041527685
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | task id: 48955006
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | errors: (none)
[2026-03-10 12:12:15] 2026-03-10 15:05:56,817 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | pilot state: finished 
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | transexitcode: 0
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | exeerrorcode: 0
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | exeerrordiag: 
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | exitcode: 0
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | exitmsg: OK
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | cpuconsumptiontime: 46826 s
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | nevents: 400
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | neventsw: 0
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | pid: 1530398
[2026-03-10 12:12:15] 2026-03-10 15:05:56,818 | INFO     | pgrp: 1530398
[2026-03-10 12:12:15] 2026-03-10 15:05:56,819 | INFO     | corecount: 8
[2026-03-10 12:12:15] 2026-03-10 15:05:56,819 | INFO     | event service: False
[2026-03-10 12:12:15] 2026-03-10 15:05:56,819 | INFO     | sizes: {0: 2279142, 1: 2280200, 2: 2280288, 39615: 2322370, 39622: 2331396, 39625: 2331452, 39626: 2331838}
[2026-03-10 12:12:15] 2026-03-10 15:05:56,819 | INFO     | --------------------------------------------------
[2026-03-10 12:12:15] 2026-03-10 15:05:56,819 | INFO     | 
[2026-03-10 12:12:15] 2026-03-10 15:05:56,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-10 12:12:15] 2026-03-10 15:05:57,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,019 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 12:12:15] 2026-03-10 15:05:57,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 12:12:15] 2026-03-10 15:05:57,022 | INFO     | job 7041527685 has completed (purged errors)
[2026-03-10 12:12:15] 2026-03-10 15:05:57,022 | INFO     | overall cleanup function is called
[2026-03-10 12:12:15] 2026-03-10 15:05:58,107 | INFO     | --- collectZombieJob: --- 10, [1530398]
[2026-03-10 12:12:15] 2026-03-10 15:05:58,107 | INFO     | zombie collector waiting for pid 1530398
[2026-03-10 12:12:15] 2026-03-10 15:05:58,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 12:12:15] 2026-03-10 15:05:58,107 | INFO     | collected zombie processes
[2026-03-10 12:12:15] 2026-03-10 15:05:58,107 | INFO     | will attempt to kill all subprocesses of pid=1530398
[2026-03-10 12:12:15] 2026-03-10 15:05:58,970 | INFO     | process IDs to be killed: [1530398] (in reverse order)
[2026-03-10 12:12:15] 2026-03-10 15:05:59,166 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 12:12:15] 2026-03-10 15:05:59,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 12:12:15] 2026-03-10 15:05:59,186 | INFO     | did not find any defunct processes belonging to 1530398
[2026-03-10 12:12:15] 2026-03-10 15:05:59,197 | INFO     | did not find any defunct processes belonging to 1530398
[2026-03-10 12:12:15] 2026-03-10 15:05:59,197 | INFO     | ready for new job
[2026-03-10 12:12:15] 2026-03-10 15:05:59,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 12:12:15] 2026-03-10 15:05:59,201 | INFO     | **************************************
[2026-03-10 12:12:15] 2026-03-10 15:05:59,201 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 12:12:15] 2026-03-10 15:05:59,201 | INFO     | **************************************
[2026-03-10 12:12:15] 2026-03-10 15:05:59,201 | INFO     | 
[2026-03-10 12:12:15] 2026-03-10 15:05:59,203 | INFO     | architecture information:
[2026-03-10 12:12:15] 2026-03-10 15:05:59,204 | INFO     | executing command: cat /etc/os-release
[2026-03-10 12:12:15] 2026-03-10 15:05:59,248 | INFO     | cat /etc/os-release:
[2026-03-10 12:12:15] NAME="CentOS Linux"
[2026-03-10 12:12:15] VERSION="7 (Core)"
[2026-03-10 12:12:15] ID="centos"
[2026-03-10 12:12:15] ID_LIKE="rhel fedora"
[2026-03-10 12:12:15] VERSION_ID="7"
[2026-03-10 12:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 12:12:15] ANSI_COLOR="0;31"
[2026-03-10 12:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 12:12:15] HOME_URL="https://www.centos.org/"
[2026-03-10 12:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 12:12:15] 
[2026-03-10 12:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 12:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 12:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 12:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 12:12:15] 
[2026-03-10 12:12:15] 2026-03-10 15:05:59,248 | INFO     | **************************************
[2026-03-10 12:12:15] 2026-03-10 15:05:59,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-10 12:12:15] 2026-03-10 15:05:59,791 | INFO     | sufficient remaining disk space (49386881024 B)
[2026-03-10 12:12:15] 2026-03-10 15:05:59,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 12:12:15] 2026-03-10 15:05:59,792 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 12:12:15] 2026-03-10 15:05:59,792 | INFO     | update_server=False
[2026-03-10 12:12:15] 2026-03-10 15:05:59,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 12:12:15] 2026-03-10 15:05:59,858 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 12:12:15] 2026-03-10 15:05:59,858 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 12:12:15] 2026-03-10 15:05:59,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:12:15] 2026-03-10 15:05:59,859 | INFO     | will abort loop
[2026-03-10 12:12:15] 2026-03-10 15:05:59,966 | INFO     | all data control threads have been joined
[2026-03-10 12:12:15] 2026-03-10 15:06:00,440 | INFO     | all payload control threads have been joined
[2026-03-10 12:12:15] 2026-03-10 15:06:00,797 | INFO     | [job] retrieve thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:00,865 | INFO     | [job] job monitor thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:00,928 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:00,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 12:12:15] 2026-03-10 15:06:00,987 | INFO     | [data] control thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:01,230 | INFO     | all job control threads have been joined
[2026-03-10 12:12:15] 2026-03-10 15:06:01,387 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:01,446 | INFO     | [payload] control thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:01,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 12:12:15] 2026-03-10 15:06:01,865 | INFO     | [data] copytool_in thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:01,873 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:01,880 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:01,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:12:15] 2026-03-10 15:06:01,888 | INFO     | [job] validate thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:02,010 | INFO     | [payload] validate_post thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:02,032 | INFO     | [payload] failed_post thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:02,237 | INFO     | [job] control thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:02,922 | INFO     | [job] queue monitor thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:02,953 | INFO     | [data] copytool_out thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:05,599 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 12:12:15] 2026-03-10 15:06:30,124 | INFO     | PID=1514506 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 12:12:15] 2026-03-10 15:06:30,124 | INFO     | .. there are 9 such processes running
[2026-03-10 12:12:15] 2026-03-10 15:06:30,125 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 12:12:15] 2026-03-10 15:06:30,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 12:12:15] 2026-03-10 15:06:30,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 12:12:15] 2026-03-10 15:06:49,263 | INFO     | [monitor] cgroup control has ended
[2026-03-10 12:12:15] 2026-03-10 15:06:49,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858015610688)>', '<ExcThread(monitor, started 139857665967872)>']
[2026-03-10 12:12:15] 2026-03-10 15:06:50,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 12:12:15] 2026-03-10 15:06:50,261 | INFO     | [monitor] control thread has ended
[2026-03-10 12:12:15] 2026-03-10 15:06:54,547 | INFO     | all workflow threads have been joined
[2026-03-10 12:12:15] 2026-03-10 15:06:54,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 12:12:15] 2026-03-10 15:06:54,547 | INFO     | traces error code: 0
[2026-03-10 12:12:15] 2026-03-10 15:06:54,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 12:12:15] 2026-03-10 15:06:58,049 [wrapper] ==== pilot stdout END ====
[2026-03-10 12:12:15] 2026-03-10 15:06:58,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 12:12:15] 2026-03-10 15:06:58,159 [wrapper] pilotpid: 1514506
[2026-03-10 12:12:15] 2026-03-10 15:06:58,199 [wrapper] Pilot exit status: 0
[2026-03-10 12:12:15] 2026-03-10 15:06:58,356 [wrapper] pandaids: 7041527685
[2026-03-10 12:12:15] 2026-03-10 15:06:58,749 [wrapper] cleanup supervisor_pilot 2538894 1514507
[2026-03-10 12:12:15] 2026-03-10 15:06:58,779 [wrapper] Test setup, not cleaning
[2026-03-10 12:12:15] 2026-03-10 15:06:58,796 [wrapper] apfmon messages muted
[2026-03-10 12:12:15] 2026-03-10 15:06:58,817 [wrapper] ==== wrapper stdout END ====
[2026-03-10 12:12:15] 2026-03-10 15:06:58,866 [wrapper] ==== wrapper stderr END ====
[2026-03-10 12:12:15]  *** Error codes and diagnostics ***
[2026-03-10 12:12:15]     "exeErrorCode": 0,
[2026-03-10 12:12:15]     "exeErrorDiag": "",
[2026-03-10 12:12:15]     "pilotErrorCode": 0,
[2026-03-10 12:12:15]     "pilotErrorDiag": "",
[2026-03-10 12:12:15]  *** Listing of results directory ***
[2026-03-10 12:12:15] total 630280
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 20:18 pilot3.tar.gz
[2026-03-10 12:12:15] -rwx------. 1 boincer umatlas     36322 Mar  9 20:53 runpilot2-wrapper.sh
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 20:53 queuedata.json
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas       100 Mar 10 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 12:12:15] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 00:04 run_atlas
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas       105 Mar 10 00:04 job.xml
[2026-03-10 12:12:15] -rw-r--r--. 2 boincer umatlas 443503658 Mar 10 00:04 EVNT.46701403._000744.pool.root.1
[2026-03-10 12:12:15] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 00:04 start_atlas.sh
[2026-03-10 12:12:15] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 00:04 shared
[2026-03-10 12:12:15] -rw-r--r--. 2 boincer umatlas    597953 Mar 10 00:04 input.tar.gz
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas         0 Mar 10 00:04 boinc_lockfile
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas      2565 Mar 10 00:04 pandaJob.out
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas        57 Mar 10 00:04 setup.sh.local
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas   1006495 Mar 10 00:05 agis_schedconf.cvmfs.json
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas       434 Mar 10 00:05 workernode_map.json
[2026-03-10 12:12:15] drwx------. 5 boincer umatlas      4096 Mar 10 00:05 pilot3
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas 186857545 Mar 10 11:03 HITS.48955006._037235.pool.root.1
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas       528 Mar 10 11:04 boinc_task_state.xml
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas      1041 Mar 10 11:05 memory_monitor_summary.json
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas   1511578 Mar 10 11:05 agis_ddmendpoints.agis.ALL.json
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas    804625 Mar 10 11:05 log.48955006._037235.job.log.tgz.1
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas      6389 Mar 10 11:05 heartbeat.json
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas        95 Mar 10 11:06 pilot_heartbeat.json
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas      5005 Mar 10 11:06 pilotlog.txt
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas   4749419 Mar 10 11:06 log.48955006._037235.job.log.1
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas       357 Mar 10 11:06 output.list
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas       620 Mar 10 11:06 runtime_log
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas   5570560 Mar 10 11:06 result.tar.gz
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas       657 Mar 10 11:06 WtkLDmSW0J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrfbLDmLJlqqm.diag
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas      9342 Mar 10 11:06 runtime_log.err
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas      6659 Mar 10 12:12 init_data.xml
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 12:12 boinc_mmap_file
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas        26 Mar 10 12:12 wrapper_checkpoint.txt
[2026-03-10 12:12:15] -rw-r--r--. 1 boincer umatlas     21409 Mar 10 12:12 stderr.txt
[2026-03-10 12:12:15] HITS file was successfully produced:
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas 186857545 Mar 10 11:03 shared/HITS.pool.root.1
[2026-03-10 12:12:15]  *** Contents of shared directory: ***
[2026-03-10 12:12:15] total 621636
[2026-03-10 12:12:15] -rw-r--r--. 2 boincer umatlas 443503658 Mar 10 00:04 ATLAS.root_0
[2026-03-10 12:12:15] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 00:04 start_atlas.sh
[2026-03-10 12:12:15] -rw-r--r--. 2 boincer umatlas    597953 Mar 10 00:04 input.tar.gz
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas 186857545 Mar 10 11:03 HITS.pool.root.1
[2026-03-10 12:12:15] -rw-------. 1 boincer umatlas   5570560 Mar 10 11:06 result.tar.gz
12:12:17 (1499225): run_atlas exited; CPU time 47948.589505
12:12:17 (1499225): called boinc_finish(0)

</stderr_txt>
]]>

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