Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:03 (34412): wrapper (7.7.26015): starting
09:49:03 (34412): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 09:49:03] Arguments: --nthreads 4
[2026-03-15 09:49:03] Threads: 4
[2026-03-15 09:49:03] Checking for CVMFS
[2026-03-15 09:49:03] No cvmfs_config command found, will try listing directly
[2026-03-15 09:49:03] CVMFS is ok
[2026-03-15 09:49:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 09:49:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 09:49:03] Further information can be found at the LHC@home message board.
[2026-03-15 09:49:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:49:03] Checking for apptainer binary...
[2026-03-15 09:49:03] which: no apptainer in ((null))
[2026-03-15 09:49:03] apptainer is not installed, using version from CVMFS
[2026-03-15 09:49:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:49:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-15 09:49:04] apptainer works
[2026-03-15 09:49:04] Set ATHENA_PROC_NUMBER=4
[2026-03-15 09:49:04] Set ATHENA_CORE_NUMBER=4
[2026-03-15 09:49:04] Starting ATLAS job with PandaID=7047975010
[2026-03-15 09:49:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 13:19:27]  *** The last 200 lines of the pilot log: ***
[2026-03-15 13:19:27] 2026-03-15 12:18:44,517 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 13:19:27] 2026-03-15 12:18:44,607 | INFO     | job 7047975010 has state=finished
[2026-03-15 13:19:27] 2026-03-15 12:18:44,607 | INFO     | preparing for final server update for job 7047975010 in state='finished'
[2026-03-15 13:19:27] 2026-03-15 12:18:44,607 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/11/PanDA_Pilot-7047975010/jobReport.json
[2026-03-15 13:19:27] 2026-03-15 12:18:44,609 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/11/workernode_map.json
[2026-03-15 13:19:27] 2026-03-15 12:18:44,610 | INFO     | this job has now completed (state=finished)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,610 | INFO     | log transfer has been attempted: DONE
[2026-03-15 13:19:27] 2026-03-15 12:18:44,610 | INFO     | job 7047975010 has finished - writing final server update
[2026-03-15 13:19:27] 2026-03-15 12:18:44,610 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4054027/.job.ad'
[2026-03-15 13:19:27] 2026-03-15 12:18:44,610 | INFO     | total number of processed events: 400 (read)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,634 | INFO     | using path: /var/lib/boinc/var/slot32/slots/11/PanDA_Pilot-7047975010/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,635 | INFO     | extracted standard info from prmon json
[2026-03-15 13:19:27] 2026-03-15 12:18:44,635 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 13:19:27] 2026-03-15 12:18:44,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 13:19:27] 2026-03-15 12:18:44,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 13:19:27] 2026-03-15 12:18:44,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 13:19:27] 2026-03-15 12:18:44,639 | INFO     | fitting pss+swap vs Time
[2026-03-15 13:19:27] 2026-03-15 12:18:44,640 | INFO     | sum of square deviations: 2671338109.9804816
[2026-03-15 13:19:27] 2026-03-15 12:18:44,641 | INFO     | sum of deviations: 25686378442.595108
[2026-03-15 13:19:27] 2026-03-15 12:18:44,641 | INFO     | mean x: 1773570858.009756
[2026-03-15 13:19:27] 2026-03-15 12:18:44,641 | INFO     | mean y: 2329831.7024390246
[2026-03-15 13:19:27] 2026-03-15 12:18:44,641 | INFO     | intersect: -17051524969.900932
[2026-03-15 13:19:27] 2026-03-15 12:18:44,642 | INFO     | chi2: 1.4612711607086621
[2026-03-15 13:19:27] 2026-03-15 12:18:44,642 | INFO     | sum of square deviations: 2480600259.979985
[2026-03-15 13:19:27] 2026-03-15 12:18:44,643 | INFO     | sum of deviations: 24908544805.109985
[2026-03-15 13:19:27] 2026-03-15 12:18:44,643 | INFO     | mean x: 1773570705.51
[2026-03-15 13:19:27] 2026-03-15 12:18:44,643 | INFO     | mean y: 2329209.695
[2026-03-15 13:19:27] 2026-03-15 12:18:44,644 | INFO     | intersect: -17806693104.75997
[2026-03-15 13:19:27] 2026-03-15 12:18:44,644 | INFO     | chi2: 1.462220727401964
[2026-03-15 13:19:27] 2026-03-15 12:18:44,644 | INFO     | current chi2=1.462220727401964 (change=-0.0649822373036791 %)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,644 | INFO     | right removable region: 199
[2026-03-15 13:19:27] 2026-03-15 12:18:44,644 | INFO     | sum of square deviations: 2480599039.979985
[2026-03-15 13:19:27] 2026-03-15 12:18:44,646 | INFO     | sum of deviations: -2232656390.099999
[2026-03-15 13:19:27] 2026-03-15 12:18:44,646 | INFO     | mean x: 1773571010.51
[2026-03-15 13:19:27] 2026-03-15 12:18:44,646 | INFO     | mean y: 2351871.55
[2026-03-15 13:19:27] 2026-03-15 12:18:44,646 | INFO     | intersect: 1598649614.99475
[2026-03-15 13:19:27] 2026-03-15 12:18:44,646 | INFO     | chi2: 0.012571230255638216
[2026-03-15 13:19:27] 2026-03-15 12:18:44,646 | INFO     | current chi2=0.012571230255638216 (change=99.13970585380324 %)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,647 | INFO     | sum of square deviations: 2299162469.979479
[2026-03-15 13:19:27] 2026-03-15 12:18:44,648 | INFO     | sum of deviations: -1036977944.4923077
[2026-03-15 13:19:27] 2026-03-15 12:18:44,648 | INFO     | mean x: 1773571163.0102565
[2026-03-15 13:19:27] 2026-03-15 12:18:44,648 | INFO     | mean y: 2350865.2461538464
[2026-03-15 13:19:27] 2026-03-15 12:18:44,648 | INFO     | intersect: 802274403.9448447
[2026-03-15 13:19:27] 2026-03-15 12:18:44,649 | INFO     | chi2: 0.011413588984281197
[2026-03-15 13:19:27] 2026-03-15 12:18:44,649 | INFO     | current chi2=0.011413588984281197 (change=9.20865538070799 %)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,649 | INFO     | left removable region: 20
[2026-03-15 13:19:27] 2026-03-15 12:18:44,649 | INFO     | sum of square deviations: 1778370821.977653
[2026-03-15 13:19:27] 2026-03-15 12:18:44,650 | INFO     | sum of deviations: 2162392908.6592174
[2026-03-15 13:19:27] 2026-03-15 12:18:44,650 | INFO     | mean x: 1773571285.0111732
[2026-03-15 13:19:27] 2026-03-15 12:18:44,650 | INFO     | mean y: 2347494.6703910613
[2026-03-15 13:19:27] 2026-03-15 12:18:44,650 | INFO     | intersect: -2154209463.1438713
[2026-03-15 13:19:27] 2026-03-15 12:18:44,651 | INFO     | chi2: 0.0045309279813378536
[2026-03-15 13:19:27] 2026-03-15 12:18:44,651 | INFO     | current memory leak: 1.22 B/s (using 179 data points, chi2=0.00)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,651 | INFO     | could have reported an average CPU frequency of 2692 MHz (10 samples)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,651 | INFO     | ..............................
[2026-03-15 13:19:27] 2026-03-15 12:18:44,651 | INFO     | . Timing measurements:
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . get job = 0 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . initial setup = 21 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . payload setup = 21 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . stage-in = 0 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . payload execution = 12492 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . stage-out = 1 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | . log creation = 0 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,652 | INFO     | ..............................
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | 
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | job summary report
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | --------------------------------------------------
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | PanDA job id: 7047975010
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | task id: 48958554
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | errors: (none)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 13:19:27] 2026-03-15 12:18:44,742 | INFO     | pilot state: finished 
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | transexitcode: 0
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | exeerrorcode: 0
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | exeerrordiag: 
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | exitcode: 0
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | exitmsg: OK
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | cpuconsumptiontime: 46366 s
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | nevents: 400
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | neventsw: 0
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | pid: 45195
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | pgrp: 45195
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | corecount: 4
[2026-03-15 13:19:27] 2026-03-15 12:18:44,743 | INFO     | event service: False
[2026-03-15 13:19:27] 2026-03-15 12:18:44,744 | INFO     | sizes: {0: 2279752, 1: 2280213, 12518: 2310315, 12520: 2319337, 12524: 2319587}
[2026-03-15 13:19:27] 2026-03-15 12:18:44,744 | INFO     | --------------------------------------------------
[2026-03-15 13:19:27] 2026-03-15 12:18:44,744 | INFO     | 
[2026-03-15 13:19:27] 2026-03-15 12:18:44,744 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/11
[2026-03-15 13:19:27] 2026-03-15 12:18:44,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 13:19:27] 2026-03-15 12:18:44,781 | INFO     | job 7047975010 has completed (purged errors)
[2026-03-15 13:19:27] 2026-03-15 12:18:44,781 | INFO     | overall cleanup function is called
[2026-03-15 13:19:27] 2026-03-15 12:18:45,790 | INFO     | --- collectZombieJob: --- 10, [45195]
[2026-03-15 13:19:27] 2026-03-15 12:18:45,790 | INFO     | zombie collector waiting for pid 45195
[2026-03-15 13:19:27] 2026-03-15 12:18:45,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 13:19:27] 2026-03-15 12:18:45,791 | INFO     | collected zombie processes
[2026-03-15 13:19:27] 2026-03-15 12:18:45,791 | INFO     | will attempt to kill all subprocesses of pid=45195
[2026-03-15 13:19:27] 2026-03-15 12:18:46,646 | INFO     | process IDs to be killed: [45195] (in reverse order)
[2026-03-15 13:19:27] 2026-03-15 12:18:47,014 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 13:19:27] 2026-03-15 12:18:47,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 13:19:27] 2026-03-15 12:18:47,045 | INFO     | did not find any defunct processes belonging to 45195
[2026-03-15 13:19:27] 2026-03-15 12:18:47,074 | INFO     | did not find any defunct processes belonging to 45195
[2026-03-15 13:19:27] 2026-03-15 12:18:47,074 | INFO     | ready for new job
[2026-03-15 13:19:27] 2026-03-15 12:18:47,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 13:19:27] 2026-03-15 12:18:47,078 | INFO     | **************************************
[2026-03-15 13:19:27] 2026-03-15 12:18:47,078 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 13:19:27] 2026-03-15 12:18:47,078 | INFO     | **************************************
[2026-03-15 13:19:27] 2026-03-15 12:18:47,078 | INFO     | 
[2026-03-15 13:19:27] 2026-03-15 12:18:47,087 | INFO     | architecture information:
[2026-03-15 13:19:27] 2026-03-15 12:18:47,087 | INFO     | executing command: cat /etc/os-release
[2026-03-15 13:19:27] 2026-03-15 12:18:47,116 | INFO     | cat /etc/os-release:
[2026-03-15 13:19:27] NAME="CentOS Linux"
[2026-03-15 13:19:27] VERSION="7 (Core)"
[2026-03-15 13:19:27] ID="centos"
[2026-03-15 13:19:27] ID_LIKE="rhel fedora"
[2026-03-15 13:19:27] VERSION_ID="7"
[2026-03-15 13:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 13:19:27] ANSI_COLOR="0;31"
[2026-03-15 13:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 13:19:27] HOME_URL="https://www.centos.org/"
[2026-03-15 13:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 13:19:27] 
[2026-03-15 13:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 13:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 13:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 13:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 13:19:27] 
[2026-03-15 13:19:27] 2026-03-15 12:18:47,116 | INFO     | **************************************
[2026-03-15 13:19:27] 2026-03-15 12:18:47,620 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/11
[2026-03-15 13:19:27] 2026-03-15 12:18:47,649 | INFO     | sufficient remaining disk space (171886772224 B)
[2026-03-15 13:19:27] 2026-03-15 12:18:47,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 13:19:27] 2026-03-15 12:18:47,649 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 13:19:27] 2026-03-15 12:18:47,650 | INFO     | update_server=False
[2026-03-15 13:19:27] 2026-03-15 12:18:47,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 13:19:27] 2026-03-15 12:18:47,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 13:19:27] 2026-03-15 12:18:47,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 13:19:27] 2026-03-15 12:18:47,651 | INFO     | aborting loop
[2026-03-15 13:19:27] 2026-03-15 12:18:47,872 | INFO     | all job control threads have been joined
[2026-03-15 13:19:27] 2026-03-15 12:18:47,879 | INFO     | all data control threads have been joined
[2026-03-15 13:19:27] 2026-03-15 12:18:48,655 | INFO     | [job] retrieve thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,656 | INFO     | [job] job monitor thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,669 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,762 | INFO     | [job] validate thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,877 | INFO     | [job] control thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,884 | INFO     | [data] control thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,923 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:48,985 | INFO     | all payload control threads have been joined
[2026-03-15 13:19:27] 2026-03-15 12:18:49,143 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:49,631 | INFO     | [payload] failed_post thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:49,647 | INFO     | [payload] validate_post thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:49,656 | INFO     | [data] copytool_out thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:49,680 | INFO     | [data] copytool_in thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:49,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 13:19:27] 2026-03-15 12:18:49,990 | INFO     | [payload] control thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:50,143 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:50,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 13:19:27] 2026-03-15 12:18:50,756 | INFO     | [job] queue monitor thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:18:54,618 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 13:19:27] 2026-03-15 12:19:17,416 | INFO     | PID=39282 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 13:19:27] 2026-03-15 12:19:17,416 | INFO     | .. there are 24 such processes running
[2026-03-15 13:19:27] 2026-03-15 12:19:17,416 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 13:19:27] 2026-03-15 12:19:17,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 13:19:27] 2026-03-15 12:19:17,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 13:19:27] 2026-03-15 12:19:20,453 | INFO     | [monitor] cgroup control has ended
[2026-03-15 13:19:27] 2026-03-15 12:19:21,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22968297817920)>', '<ExcThread(monitor, started 22968056157952)>']
[2026-03-15 13:19:27] 2026-03-15 12:19:22,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 13:19:27] 2026-03-15 12:19:22,441 | INFO     | [monitor] control thread has ended
[2026-03-15 13:19:27] 2026-03-15 12:19:26,781 | INFO     | all workflow threads have been joined
[2026-03-15 13:19:27] 2026-03-15 12:19:26,781 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 13:19:27] 2026-03-15 12:19:26,782 | INFO     | traces error code: 0
[2026-03-15 13:19:27] 2026-03-15 12:19:26,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 13:19:27] 2026-03-15 12:19:26,925 [wrapper] ==== pilot stdout END ====
[2026-03-15 13:19:27] 2026-03-15 12:19:26,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 13:19:27] 2026-03-15 12:19:26,932 [wrapper] pilotpid: 39282
[2026-03-15 13:19:27] 2026-03-15 12:19:26,935 [wrapper] Pilot exit status: 0
[2026-03-15 13:19:27] 2026-03-15 12:19:26,950 [wrapper] pandaids: 7047975010
[2026-03-15 13:19:27] 2026-03-15 12:19:27,154 [wrapper] cleanup supervisor_pilot  502828 39283
[2026-03-15 13:19:27] 2026-03-15 12:19:27,158 [wrapper] Test setup, not cleaning
[2026-03-15 13:19:27] 2026-03-15 12:19:27,162 [wrapper] apfmon messages muted
[2026-03-15 13:19:27] 2026-03-15 12:19:27,166 [wrapper] ==== wrapper stdout END ====
[2026-03-15 13:19:27] 2026-03-15 12:19:27,169 [wrapper] ==== wrapper stderr END ====
[2026-03-15 13:19:27]  *** Error codes and diagnostics ***
[2026-03-15 13:19:27]     "exeErrorCode": 0,
[2026-03-15 13:19:27]     "exeErrorDiag": "",
[2026-03-15 13:19:27]     "pilotErrorCode": 0,
[2026-03-15 13:19:27]     "pilotErrorDiag": "",
[2026-03-15 13:19:27]  *** Listing of results directory ***
[2026-03-15 13:19:27] total 482032
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc    584627 Mar 10 01:18 pilot3.tar.gz
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc      5111 Mar 10 01:51 queuedata.json
[2026-03-15 13:19:27] -rwx------. 1 boinc boinc     36322 Mar 10 01:51 runpilot2-wrapper.sh
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc       100 Mar 15 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 13:19:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 09:00 run_atlas
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc       105 Mar 15 09:00 job.xml
[2026-03-15 13:19:27] -rw-r--r--. 2 boinc boinc 280081531 Mar 15 09:49 EVNT.48958551._000137.pool.root.1
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc      6693 Mar 15 09:49 init_data.xml
[2026-03-15 13:19:27] -rw-r--r--. 2 boinc boinc     15845 Mar 15 09:49 start_atlas.sh
[2026-03-15 13:19:27] drwxrwx--x. 2 boinc boinc      4096 Mar 15 09:49 shared
[2026-03-15 13:19:27] -rw-r--r--. 2 boinc boinc    597952 Mar 15 09:49 input.tar.gz
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc         0 Mar 15 09:49 boinc_lockfile
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc      2518 Mar 15 09:49 pandaJob.out
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc   1006481 Mar 15 09:49 agis_schedconf.cvmfs.json
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc       440 Mar 15 09:49 workernode_map.json
[2026-03-15 13:19:27] drwx------. 5 boinc boinc      4096 Mar 15 09:50 pilot3
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc 205440019 Mar 15 13:18 HITS.48958554._003465.pool.root.1
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc       531 Mar 15 13:18 boinc_task_state.xml
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc        95 Mar 15 13:18 pilot_heartbeat.json
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc      1023 Mar 15 13:18 memory_monitor_summary.json
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc   1511579 Mar 15 13:18 agis_ddmendpoints.agis.ALL.json
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc    373697 Mar 15 13:18 log.48958554._003465.job.log.tgz.1
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc      6338 Mar 15 13:18 heartbeat.json
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc      8192 Mar 15 13:18 boinc_mmap_file
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc        28 Mar 15 13:18 wrapper_checkpoint.txt
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc      4830 Mar 15 13:19 pilotlog.txt
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc   1693131 Mar 15 13:19 log.48958554._003465.job.log.1
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc       357 Mar 15 13:19 output.list
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc       620 Mar 15 13:19 runtime_log
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc   2088960 Mar 15 13:19 result.tar.gz
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc      9222 Mar 15 13:19 runtime_log.err
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc       666 Mar 15 13:19 m4TKDmEV0J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvIeLDmdy8S4n.diag
[2026-03-15 13:19:27] -rw-r--r--. 1 boinc boinc     21151 Mar 15 13:19 stderr.txt
[2026-03-15 13:19:27] HITS file was successfully produced:
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc 205440019 Mar 15 13:18 shared/HITS.pool.root.1
[2026-03-15 13:19:27]  *** Contents of shared directory: ***
[2026-03-15 13:19:27] total 476796
[2026-03-15 13:19:27] -rw-r--r--. 2 boinc boinc 280081531 Mar 15 09:49 ATLAS.root_0
[2026-03-15 13:19:27] -rw-r--r--. 2 boinc boinc     15845 Mar 15 09:49 start_atlas.sh
[2026-03-15 13:19:27] -rw-r--r--. 2 boinc boinc    597952 Mar 15 09:49 input.tar.gz
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc 205440019 Mar 15 13:18 HITS.pool.root.1
[2026-03-15 13:19:27] -rw-------. 1 boinc boinc   2088960 Mar 15 13:19 result.tar.gz
13:19:28 (34412): run_atlas exited; CPU time 47157.117581
13:19:28 (34412): called boinc_finish(0)

</stderr_txt>
]]>

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