Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
20:53:59 (1909154): wrapper (7.7.26015): starting
20:53:59 (1909154): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 20:53:59] Arguments: --nthreads 4
[2026-03-09 20:53:59] Threads: 4
[2026-03-09 20:53:59] Checking for CVMFS
[2026-03-09 20:53:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 20:53:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 20:53:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 20:54:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 20:54:00] 2.13.3.0 2511197 5215 50148 157096 0 188 2136504 4096001 2748 130560 0 8886259 99.996 185673 937 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-09 20:54:00] CVMFS is ok
[2026-03-09 20:54:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 20:54:00] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 20:54:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 20:54:00] Further information can be found at the LHC@home message board.
[2026-03-09 20:54:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 20:54:00] Checking for apptainer binary...
[2026-03-09 20:54:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 20:54:00] Running /usr/bin/apptainer --version
[2026-03-09 20:54:00] apptainer version 1.4.5
[2026-03-09 20:54:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 20:54:00] ASRock-B760M
[2026-03-09 20:54:00] apptainer works
[2026-03-09 20:54:00] Set ATHENA_PROC_NUMBER=4
[2026-03-09 20:54:00] Set ATHENA_CORE_NUMBER=4
[2026-03-09 20:54:00] Starting ATLAS job with PandaID=7041179843
[2026-03-09 20:54:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 22:07:49]  *** The last 200 lines of the pilot log: ***
[2026-03-09 22:07:49]  guid=6c1e8ee2-a226-40bd-beb6-abc0c5ebfcc1
[2026-03-09 22:07:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-09 22:07:49]  is_altstaged=None
[2026-03-09 22:07:49]  is_tar=False
[2026-03-09 22:07:49]  lfn=log.48955015._010333.job.log.tgz.1
[2026-03-09 22:07:49]  mtime=0
[2026-03-09 22:07:49]  protocol_id=None
[2026-03-09 22:07:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 22:07:49]  replicas=None
[2026-03-09 22:07:49]  scope=mc23_13p6TeV
[2026-03-09 22:07:49]  status=None
[2026-03-09 22:07:49]  status_code=0
[2026-03-09 22:07:49]  storage_token=
[2026-03-09 22:07:49]  surl=/home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7041179843/log.48955015._010333.job.log.tgz.1
[2026-03-09 22:07:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/b4/log.48955015._010333.job.log.tgz.1
[2026-03-09 22:07:49]  workdir=None
[2026-03-09 22:07:49] ]
[2026-03-09 22:07:49] 2026-03-10 02:07:16,571 | INFO     | transferring file log.48955015._010333.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7041179843/log.48955015._010333.job.log.tgz.1 to /home/w
[2026-03-09 22:07:49] 2026-03-10 02:07:16,571 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7041179843/log.48955015._010333.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slot
[2026-03-09 22:07:49] 2026-03-10 02:07:16,584 | INFO     | adding to output.list: log.48955015._010333.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/b4/log.48955015._010333.job.log.tg
[2026-03-09 22:07:49] 2026-03-10 02:07:16,585 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 22:07:49] 2026-03-10 02:07:16,585 | INFO     | summary of transferred files:
[2026-03-09 22:07:49] 2026-03-10 02:07:16,585 | INFO     |  -- lfn=log.48955015._010333.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 22:07:49] 2026-03-10 02:07:16,585 | INFO     | stage-out finished correctly
[2026-03-09 22:07:49] 2026-03-10 02:07:16,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 22:07:49] 2026-03-10 02:07:17,028 | INFO     | job 7041179843 has state=finished
[2026-03-09 22:07:49] 2026-03-10 02:07:17,028 | INFO     | preparing for final server update for job 7041179843 in state='finished'
[2026-03-09 22:07:49] 2026-03-10 02:07:17,029 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7041179843/jobReport.json
[2026-03-09 22:07:49] 2026-03-10 02:07:17,030 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/5/workernode_map.json
[2026-03-09 22:07:49] 2026-03-10 02:07:17,030 | INFO     | this job has now completed (state=finished)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,030 | INFO     | log transfer has been attempted: DONE
[2026-03-09 22:07:49] 2026-03-10 02:07:17,030 | INFO     | job 7041179843 has finished - writing final server update
[2026-03-09 22:07:49] 2026-03-10 02:07:17,030 | INFO     | total number of processed events: 400 (read)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,033 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7041179843/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,033 | INFO     | extracted standard info from prmon json
[2026-03-09 22:07:49] 2026-03-10 02:07:17,033 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 22:07:49] 2026-03-10 02:07:17,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 22:07:49] 2026-03-10 02:07:17,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 22:07:49] 2026-03-10 02:07:17,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 22:07:49] 2026-03-10 02:07:17,034 | INFO     | fitting pss+swap vs Time
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | sum of square deviations: 85136480.0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | sum of deviations: -2560551433.0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | mean x: 1773106326.0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | mean y: 2353427.4923076923
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | intersect: 53330021471.797935
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | chi2: 0.010841226641435444
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | current memory leak: -30.08 B/s (using 65 data points, chi2=0.01)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | could have reported an average CPU frequency of 2969 MHz (6 samples)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | ..............................
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | . Timing measurements:
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | . get job = 0 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | . initial setup = 6 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | . payload setup = 2 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,035 | INFO     | . stage-in = 0 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,036 | INFO     | . payload execution = 4365 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,036 | INFO     | . stage-out = 0 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,036 | INFO     | . log creation = 0 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,036 | INFO     | ..............................
[2026-03-09 22:07:49] 2026-03-10 02:07:17,335 | INFO     | 
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | job summary report
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | --------------------------------------------------
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | PanDA job id: 7041179843
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | task id: 48955015
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | errors: (none)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | pilot state: finished 
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | transexitcode: 0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | exeerrorcode: 0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | exeerrordiag: 
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | exitcode: 0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | exitmsg: OK
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | cpuconsumptiontime: 16447 s
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | nevents: 400
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | neventsw: 0
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | pid: 1917948
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | pgrp: 1917948
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | corecount: 4
[2026-03-09 22:07:49] 2026-03-10 02:07:17,336 | INFO     | event service: False
[2026-03-09 22:07:49] 2026-03-10 02:07:17,337 | INFO     | sizes: {0: 2280250, 11: 2280250, 4372: 2315474, 4373: 2315612}
[2026-03-09 22:07:49] 2026-03-10 02:07:17,337 | INFO     | --------------------------------------------------
[2026-03-09 22:07:49] 2026-03-10 02:07:17,337 | INFO     | 
[2026-03-09 22:07:49] 2026-03-10 02:07:17,337 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | job 7041179843 has completed (purged errors)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,350 | INFO     | overall cleanup function is called
[2026-03-09 22:07:49] 2026-03-10 02:07:17,599 | WARNING  | process 1917948 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 22:07:49] 2026-03-10 02:07:17,662 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 22:07:49] 2026-03-10 02:07:17,754 | INFO     | number of running child processes to parent process 1917948: 1
[2026-03-09 22:07:49] 2026-03-10 02:07:17,755 | INFO     | maximum number of monitored processes: 6
[2026-03-09 22:07:49] 2026-03-10 02:07:17,755 | INFO     | aborting job monitoring since job object (job id=7041179843) has expired
[2026-03-09 22:07:49] 2026-03-10 02:07:18,356 | INFO     | --- collectZombieJob: --- 10, [1917948]
[2026-03-09 22:07:49] 2026-03-10 02:07:18,357 | INFO     | zombie collector waiting for pid 1917948
[2026-03-09 22:07:49] 2026-03-10 02:07:18,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 22:07:49] 2026-03-10 02:07:18,357 | INFO     | collected zombie processes
[2026-03-09 22:07:49] 2026-03-10 02:07:18,357 | INFO     | will attempt to kill all subprocesses of pid=1917948
[2026-03-09 22:07:49] 2026-03-10 02:07:18,446 | INFO     | process IDs to be killed: [1917948] (in reverse order)
[2026-03-09 22:07:49] 2026-03-10 02:07:18,481 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 22:07:49] 2026-03-10 02:07:18,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 22:07:49] 2026-03-10 02:07:18,484 | INFO     | did not find any defunct processes belonging to 1917948
[2026-03-09 22:07:49] 2026-03-10 02:07:18,487 | INFO     | did not find any defunct processes belonging to 1917948
[2026-03-09 22:07:49] 2026-03-10 02:07:18,487 | INFO     | ready for new job
[2026-03-09 22:07:49] 2026-03-10 02:07:18,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 22:07:49] 2026-03-10 02:07:18,488 | INFO     | **************************************
[2026-03-09 22:07:49] 2026-03-10 02:07:18,488 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 22:07:49] 2026-03-10 02:07:18,488 | INFO     | **************************************
[2026-03-09 22:07:49] 2026-03-10 02:07:18,488 | INFO     | 
[2026-03-09 22:07:49] 2026-03-10 02:07:18,489 | INFO     | architecture information:
[2026-03-09 22:07:49] 2026-03-10 02:07:18,490 | INFO     | executing command: cat /etc/os-release
[2026-03-09 22:07:49] 2026-03-10 02:07:18,499 | INFO     | cat /etc/os-release:
[2026-03-09 22:07:49] NAME="CentOS Linux"
[2026-03-09 22:07:49] VERSION="7 (Core)"
[2026-03-09 22:07:49] ID="centos"
[2026-03-09 22:07:49] ID_LIKE="rhel fedora"
[2026-03-09 22:07:49] VERSION_ID="7"
[2026-03-09 22:07:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 22:07:49] ANSI_COLOR="0;31"
[2026-03-09 22:07:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 22:07:49] HOME_URL="https://www.centos.org/"
[2026-03-09 22:07:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 22:07:49] 
[2026-03-09 22:07:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 22:07:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 22:07:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 22:07:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 22:07:49] 
[2026-03-09 22:07:49] 2026-03-10 02:07:18,499 | INFO     | **************************************
[2026-03-09 22:07:49] 2026-03-10 02:07:19,002 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | INFO     | sufficient remaining disk space (420407672832 B)
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | INFO     | update_server=False
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 22:07:49] 2026-03-10 02:07:19,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 22:07:49] 2026-03-10 02:07:19,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 22:07:49] 2026-03-10 02:07:19,016 | INFO     | aborting loop
[2026-03-09 22:07:49] 2026-03-10 02:07:19,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 22:07:49] 2026-03-10 02:07:19,832 | INFO     | all payload control threads have been joined
[2026-03-09 22:07:49] 2026-03-10 02:07:19,845 | INFO     | all data control threads have been joined
[2026-03-09 22:07:49] 2026-03-10 02:07:19,901 | INFO     | [monitor] cgroup control has ended
[2026-03-09 22:07:49] 2026-03-10 02:07:20,020 | INFO     | [job] retrieve thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,021 | INFO     | [job] queue monitor thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,022 | INFO     | [job] job monitor thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,072 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,216 | INFO     | [payload] validate_post thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,244 | INFO     | [data] copytool_in thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,386 | INFO     | all job control threads have been joined
[2026-03-09 22:07:49] 2026-03-10 02:07:20,838 | INFO     | [payload] control thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:20,851 | INFO     | [data] control thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:21,036 | INFO     | [payload] failed_post thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:21,368 | INFO     | [job] validate thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:21,391 | INFO     | [job] control thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:21,476 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:21,485 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:21,635 | INFO     | [data] copytool_out thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:23,018 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:29,956 | INFO     | job.realtimelogging is not enabled
[2026-03-09 22:07:49] 2026-03-10 02:07:30,961 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 22:07:49] 2026-03-10 02:07:31,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132456911927104)>', '<ExcThread(monitor, started 132456413898496)>']
[2026-03-09 22:07:49] 2026-03-10 02:07:36,770 | INFO     | all workflow threads have been joined
[2026-03-09 22:07:49] 2026-03-10 02:07:36,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 22:07:49] 2026-03-10 02:07:36,770 | INFO     | traces error code: 0
[2026-03-09 22:07:49] 2026-03-10 02:07:36,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 22:07:49] 2026-03-10 02:07:49,050 | INFO     | PID=1913346 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 22:07:49] 2026-03-10 02:07:49,050 | INFO     | .. there are 4 such processes running
[2026-03-09 22:07:49] 2026-03-10 02:07:49,051 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 22:07:49] 2026-03-10 02:07:49,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 22:07:49] 2026-03-10 02:07:49,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 22:07:49] 2026-03-10 02:07:49,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 22:07:49] 2026-03-10 02:07:49,051 | INFO     | [monitor] control thread has ended
[2026-03-09 22:07:49] 2026-03-10 02:07:49,128 [wrapper] ==== pilot stdout END ====
[2026-03-09 22:07:49] 2026-03-10 02:07:49,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 22:07:49] 2026-03-10 02:07:49,133 [wrapper] pilotpid: 1913346
[2026-03-09 22:07:49] 2026-03-10 02:07:49,134 [wrapper] Pilot exit status: 0
[2026-03-09 22:07:49] 2026-03-10 02:07:49,141 [wrapper] pandaids: 7041179843
[2026-03-09 22:07:49] 2026-03-10 02:07:49,162 [wrapper] cleanup supervisor_pilot 1956288 1913347
[2026-03-09 22:07:49] 2026-03-10 02:07:49,163 [wrapper] Test setup, not cleaning
[2026-03-09 22:07:49] 2026-03-10 02:07:49,165 [wrapper] apfmon messages muted
[2026-03-09 22:07:49] 2026-03-10 02:07:49,166 [wrapper] ==== wrapper stdout END ====
[2026-03-09 22:07:49] 2026-03-10 02:07:49,167 [wrapper] ==== wrapper stderr END ====
[2026-03-09 22:07:49]  *** Error codes and diagnostics ***
[2026-03-09 22:07:49]     "exeErrorCode": 0,
[2026-03-09 22:07:49]     "exeErrorDiag": "",
[2026-03-09 22:07:49]     "pilotErrorCode": 0,
[2026-03-09 22:07:49]     "pilotErrorDiag": "",
[2026-03-09 22:07:49]  *** Listing of results directory ***
[2026-03-09 22:07:49] total 612460
[2026-03-09 22:07:49] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  9 15:33 pilot3.tar.gz
[2026-03-09 22:07:49] -rwx------ 1 whitlerd whitlerd     36322 Mar  9 15:33 runpilot2-wrapper.sh
[2026-03-09 22:07:49] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  9 15:34 queuedata.json
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 22:07:49] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 20:53 run_atlas
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 20:53 job.xml
[2026-03-09 22:07:49] -rw-r--r-- 2 whitlerd whitlerd 438695005 Mar  9 20:53 EVNT.46701403._002259.pool.root.1
[2026-03-09 22:07:49] -rw-r--r-- 2 whitlerd whitlerd    597955 Mar  9 20:53 input.tar.gz
[2026-03-09 22:07:49] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 20:53 start_atlas.sh
[2026-03-09 22:07:49] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 20:53 shared
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 20:53 boinc_setup_complete
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd      9185 Mar  9 20:53 init_data.xml
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 20:53 boinc_lockfile
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd      2571 Mar  9 20:54 pandaJob.out
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd   1002346 Mar  9 20:54 agis_schedconf.cvmfs.json
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 20:54 agis_ddmendpoints.agis.ALL.json
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd       415 Mar  9 20:54 workernode_map.json
[2026-03-09 22:07:49] drwx------ 5 whitlerd whitlerd      4096 Mar  9 20:54 pilot3
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd 182653708 Mar  9 22:06 HITS.48955015._010333.pool.root.1
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd      1023 Mar  9 22:07 memory_monitor_summary.json
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  9 22:07 boinc_task_state.xml
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd    268417 Mar  9 22:07 log.48955015._010333.job.log.tgz.1
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd      6310 Mar  9 22:07 heartbeat.json
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 22:07 boinc_mmap_file
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  9 22:07 wrapper_checkpoint.txt
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd       822 Mar  9 22:07 pilotlog.txt
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd        95 Mar  9 22:07 pilot_heartbeat.json
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd    668594 Mar  9 22:07 log.48955015._010333.job.log.1
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd       357 Mar  9 22:07 output.list
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 22:07 runtime_log
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd    952320 Mar  9 22:07 result.tar.gz
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd      9019 Mar  9 22:07 runtime_log.err
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd       648 Mar  9 22:07 kPPNDmRXvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmi0aLDmUBK4Im.diag
[2026-03-09 22:07:49] -rw-rw-r-- 1 whitlerd whitlerd     21493 Mar  9 22:07 stderr.txt
[2026-03-09 22:07:49] HITS file was successfully produced:
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd 182653708 Mar  9 22:06 shared/HITS.pool.root.1
[2026-03-09 22:07:49]  *** Contents of shared directory: ***
[2026-03-09 22:07:49] total 608332
[2026-03-09 22:07:49] -rw-r--r-- 2 whitlerd whitlerd 438695005 Mar  9 20:53 ATLAS.root_0
[2026-03-09 22:07:49] -rw-r--r-- 2 whitlerd whitlerd    597955 Mar  9 20:53 input.tar.gz
[2026-03-09 22:07:49] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 20:53 start_atlas.sh
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd 182653708 Mar  9 22:06 HITS.pool.root.1
[2026-03-09 22:07:49] -rw------- 1 whitlerd whitlerd    952320 Mar  9 22:07 result.tar.gz
22:07:50 (1909154): run_atlas exited; CPU time 16494.461328
22:07:50 (1909154): called boinc_finish(0)

</stderr_txt>
]]>

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