Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:54:37 (1716738): wrapper (7.7.26015): starting
03:54:37 (1716738): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 03:54:37] Arguments: --nthreads 4
[2026-03-10 03:54:37] Threads: 4
[2026-03-10 03:54:37] Checking for CVMFS
[2026-03-10 03:54:37] No cvmfs_config command found, will try listing directly
[2026-03-10 03:54:37] CVMFS is ok
[2026-03-10 03:54:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 03:54:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 03:54:37] Further information can be found at the LHC@home message board.
[2026-03-10 03:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:54:37] Checking for apptainer binary...
[2026-03-10 03:54:37] which: no apptainer in ((null))
[2026-03-10 03:54:37] apptainer is not installed, using version from CVMFS
[2026-03-10 03:54:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:54:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-03-10 03:54:37] apptainer works
[2026-03-10 03:54:37] Set ATHENA_PROC_NUMBER=4
[2026-03-10 03:54:37] Set ATHENA_CORE_NUMBER=4
[2026-03-10 03:54:37] Starting ATLAS job with PandaID=7047693573
[2026-03-10 03:54:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 07:00:17]  *** The last 200 lines of the pilot log: ***
[2026-03-10 07:00:17] 2026-03-10 05:59:42,272 | INFO     | log transfer has been attempted: DONE
[2026-03-10 07:00:17] 2026-03-10 05:59:42,272 | INFO     | job 7047693573 has finished - writing final server update
[2026-03-10 07:00:17] 2026-03-10 05:59:42,272 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1325146/.job.ad'
[2026-03-10 07:00:17] 2026-03-10 05:59:42,272 | INFO     | total number of processed events: 400 (read)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,284 | INFO     | using path: /var/lib/boinc/var/slot12/slots/5/PanDA_Pilot-7047693573/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,285 | INFO     | extracted standard info from prmon json
[2026-03-10 07:00:17] 2026-03-10 05:59:42,285 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 07:00:17] 2026-03-10 05:59:42,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 07:00:17] 2026-03-10 05:59:42,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 07:00:17] 2026-03-10 05:59:42,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 07:00:17] 2026-03-10 05:59:42,290 | INFO     | fitting pss+swap vs Time
[2026-03-10 07:00:17] 2026-03-10 05:59:42,290 | INFO     | sum of square deviations: 1869302025.5
[2026-03-10 07:00:17] 2026-03-10 05:59:42,291 | INFO     | sum of deviations: 12662985486.000004
[2026-03-10 07:00:17] 2026-03-10 05:59:42,291 | INFO     | mean x: 1773116835.5
[2026-03-10 07:00:17] 2026-03-10 05:59:42,291 | INFO     | mean y: 2309510.153846154
[2026-03-10 07:00:17] 2026-03-10 05:59:42,292 | INFO     | intersect: -12009100335.140175
[2026-03-10 07:00:17] 2026-03-10 05:59:42,292 | INFO     | chi2: 2.12755031038467
[2026-03-10 07:00:17] 2026-03-10 05:59:42,292 | INFO     | sum of square deviations: 1719429448.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,293 | INFO     | sum of deviations: 23464171184.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,293 | INFO     | mean x: 1773116683.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,293 | INFO     | mean y: 2320241.627118644
[2026-03-10 07:00:17] 2026-03-10 05:59:42,294 | INFO     | intersect: -24194493083.579037
[2026-03-10 07:00:17] 2026-03-10 05:59:42,294 | INFO     | chi2: 1.3309056832739605
[2026-03-10 07:00:17] 2026-03-10 05:59:42,294 | INFO     | current chi2=1.3309056832739605 (change=37.44422038916075 %)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,294 | INFO     | sum of square deviations: 1577789583.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,295 | INFO     | sum of deviations: 22639473845.499996
[2026-03-10 07:00:17] 2026-03-10 05:59:42,296 | INFO     | mean x: 1773116530.5
[2026-03-10 07:00:17] 2026-03-10 05:59:42,296 | INFO     | mean y: 2319353.5872093025
[2026-03-10 07:00:17] 2026-03-10 05:59:42,296 | INFO     | intersect: -25439872526.62021
[2026-03-10 07:00:17] 2026-03-10 05:59:42,296 | INFO     | chi2: 1.3318411364499896
[2026-03-10 07:00:17] 2026-03-10 05:59:42,296 | INFO     | current chi2=1.3318411364499896 (change=-0.070286962313354 %)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,296 | INFO     | right removable region: 171
[2026-03-10 07:00:17] 2026-03-10 05:59:42,297 | INFO     | sum of square deviations: 1719429448.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,298 | INFO     | sum of deviations: -10460695227.000002
[2026-03-10 07:00:17] 2026-03-10 05:59:42,298 | INFO     | mean x: 1773116988.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,298 | INFO     | mean y: 2332707.8474576273
[2026-03-10 07:00:17] 2026-03-10 05:59:42,298 | INFO     | intersect: 10789653138.388449
[2026-03-10 07:00:17] 2026-03-10 05:59:42,298 | INFO     | chi2: 0.8249014272078578
[2026-03-10 07:00:17] 2026-03-10 05:59:42,299 | INFO     | current chi2=0.8249014272078578 (change=61.227641800925866 %)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,299 | INFO     | sum of square deviations: 1577789583.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,300 | INFO     | sum of deviations: -9064318271.5
[2026-03-10 07:00:17] 2026-03-10 05:59:42,300 | INFO     | mean x: 1773117140.5
[2026-03-10 07:00:17] 2026-03-10 05:59:42,300 | INFO     | mean y: 2331200.25
[2026-03-10 07:00:17] 2026-03-10 05:59:42,300 | INFO     | intersect: 10188796028.83924
[2026-03-10 07:00:17] 2026-03-10 05:59:42,300 | INFO     | chi2: 0.8236183554307217
[2026-03-10 07:00:17] 2026-03-10 05:59:42,301 | INFO     | current chi2=0.8236183554307217 (change=0.15554243632224188 %)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,301 | INFO     | left removable region: 20
[2026-03-10 07:00:17] 2026-03-10 05:59:42,301 | INFO     | sum of square deviations: 1067554900.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,302 | INFO     | sum of deviations: 2339188898.9999995
[2026-03-10 07:00:17] 2026-03-10 05:59:42,302 | INFO     | mean x: 1773117110.0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,302 | INFO     | mean y: 2341886.8874172186
[2026-03-10 07:00:17] 2026-03-10 05:59:42,302 | INFO     | intersect: -3882850209.8740335
[2026-03-10 07:00:17] 2026-03-10 05:59:42,302 | INFO     | chi2: 0.0001884099269266108
[2026-03-10 07:00:17] 2026-03-10 05:59:42,303 | INFO     | current memory leak: 2.19 B/s (using 151 data points, chi2=0.00)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,303 | INFO     | could have reported an average CPU frequency of 2542 MHz (10 samples)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,303 | INFO     | ..............................
[2026-03-10 07:00:17] 2026-03-10 05:59:42,303 | INFO     | . Timing measurements:
[2026-03-10 07:00:17] 2026-03-10 05:59:42,303 | INFO     | . get job = 0 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | . initial setup = 5 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | . payload setup = 5 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | . stage-in = 0 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | . payload execution = 11062 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | . stage-out = 0 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | . log creation = 0 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,304 | INFO     | ..............................
[2026-03-10 07:00:17] 2026-03-10 05:59:42,390 | INFO     | 
[2026-03-10 07:00:17] 2026-03-10 05:59:42,390 | INFO     | job summary report
[2026-03-10 07:00:17] 2026-03-10 05:59:42,390 | INFO     | --------------------------------------------------
[2026-03-10 07:00:17] 2026-03-10 05:59:42,390 | INFO     | PanDA job id: 7047693573
[2026-03-10 07:00:17] 2026-03-10 05:59:42,390 | INFO     | task id: 48958610
[2026-03-10 07:00:17] 2026-03-10 05:59:42,390 | INFO     | errors: (none)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | pilot state: finished 
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | transexitcode: 0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | exeerrorcode: 0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | exeerrordiag: 
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | exitcode: 0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | exitmsg: OK
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | cpuconsumptiontime: 42347 s
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | nevents: 400
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | neventsw: 0
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | pid: 1732128
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | pgrp: 1732128
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | corecount: 4
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | event service: False
[2026-03-10 07:00:17] 2026-03-10 05:59:42,391 | INFO     | sizes: {0: 2279765, 1: 2280226, 11: 2280226, 11072: 2309498, 11073: 2318518, 11076: 2318574, 11078: 2318896}
[2026-03-10 07:00:17] 2026-03-10 05:59:42,392 | INFO     | --------------------------------------------------
[2026-03-10 07:00:17] 2026-03-10 05:59:42,392 | INFO     | 
[2026-03-10 07:00:17] 2026-03-10 05:59:42,392 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/5
[2026-03-10 07:00:17] 2026-03-10 05:59:42,411 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | job 7047693573 has completed (purged errors)
[2026-03-10 07:00:17] 2026-03-10 05:59:42,413 | INFO     | overall cleanup function is called
[2026-03-10 07:00:17] 2026-03-10 05:59:43,421 | INFO     | --- collectZombieJob: --- 10, [1732128]
[2026-03-10 07:00:17] 2026-03-10 05:59:43,421 | INFO     | zombie collector waiting for pid 1732128
[2026-03-10 07:00:17] 2026-03-10 05:59:43,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 07:00:17] 2026-03-10 05:59:43,421 | INFO     | collected zombie processes
[2026-03-10 07:00:17] 2026-03-10 05:59:43,421 | INFO     | will attempt to kill all subprocesses of pid=1732128
[2026-03-10 07:00:17] 2026-03-10 05:59:43,759 | INFO     | process IDs to be killed: [1732128] (in reverse order)
[2026-03-10 07:00:17] 2026-03-10 05:59:43,873 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 07:00:17] 2026-03-10 05:59:43,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 07:00:17] 2026-03-10 05:59:43,885 | INFO     | did not find any defunct processes belonging to 1732128
[2026-03-10 07:00:17] 2026-03-10 05:59:43,896 | INFO     | did not find any defunct processes belonging to 1732128
[2026-03-10 07:00:17] 2026-03-10 05:59:43,897 | INFO     | ready for new job
[2026-03-10 07:00:17] 2026-03-10 05:59:43,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 07:00:17] 2026-03-10 05:59:43,899 | INFO     | **************************************
[2026-03-10 07:00:17] 2026-03-10 05:59:43,899 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 07:00:17] 2026-03-10 05:59:43,899 | INFO     | **************************************
[2026-03-10 07:00:17] 2026-03-10 05:59:43,899 | INFO     | 
[2026-03-10 07:00:17] 2026-03-10 05:59:43,903 | INFO     | architecture information:
[2026-03-10 07:00:17] 2026-03-10 05:59:43,904 | INFO     | executing command: cat /etc/os-release
[2026-03-10 07:00:17] 2026-03-10 05:59:43,917 | INFO     | cat /etc/os-release:
[2026-03-10 07:00:17] NAME="CentOS Linux"
[2026-03-10 07:00:17] VERSION="7 (Core)"
[2026-03-10 07:00:17] ID="centos"
[2026-03-10 07:00:17] ID_LIKE="rhel fedora"
[2026-03-10 07:00:17] VERSION_ID="7"
[2026-03-10 07:00:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 07:00:17] ANSI_COLOR="0;31"
[2026-03-10 07:00:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 07:00:17] HOME_URL="https://www.centos.org/"
[2026-03-10 07:00:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 07:00:17] 
[2026-03-10 07:00:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 07:00:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 07:00:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 07:00:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 07:00:17] 
[2026-03-10 07:00:17] 2026-03-10 05:59:43,918 | INFO     | **************************************
[2026-03-10 07:00:17] 2026-03-10 05:59:44,421 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/5
[2026-03-10 07:00:17] 2026-03-10 05:59:44,437 | INFO     | sufficient remaining disk space (20719861760 B)
[2026-03-10 07:00:17] 2026-03-10 05:59:44,437 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 07:00:17] 2026-03-10 05:59:44,437 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 07:00:17] 2026-03-10 05:59:44,438 | INFO     | update_server=False
[2026-03-10 07:00:17] 2026-03-10 05:59:44,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 07:00:17] 2026-03-10 05:59:44,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:00:17] 2026-03-10 05:59:44,438 | INFO     | aborting loop
[2026-03-10 07:00:17] 2026-03-10 05:59:44,836 | INFO     | all payload control threads have been joined
[2026-03-10 07:00:17] 2026-03-10 05:59:44,943 | INFO     | all data control threads have been joined
[2026-03-10 07:00:17] 2026-03-10 05:59:44,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 07:00:17] 2026-03-10 05:59:45,443 | INFO     | [job] retrieve thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:45,443 | INFO     | [job] job monitor thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:45,519 | INFO     | [data] copytool_in thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:45,632 | INFO     | all job control threads have been joined
[2026-03-10 07:00:17] 2026-03-10 05:59:45,810 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:45,810 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:45,841 | INFO     | [payload] control thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:45,948 | INFO     | [data] control thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 07:00:17] 2026-03-10 05:59:46,468 | INFO     | [job] validate thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,477 | INFO     | [payload] validate_post thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,636 | INFO     | [job] control thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,716 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,716 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,717 | INFO     | [payload] failed_post thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:46,955 | INFO     | [data] copytool_out thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:47,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:00:17] 2026-03-10 05:59:48,405 | INFO     | [job] queue monitor thread has finished
[2026-03-10 07:00:17] 2026-03-10 05:59:50,087 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 07:00:17] 2026-03-10 06:00:10,895 | INFO     | [monitor] cgroup control has ended
[2026-03-10 07:00:17] 2026-03-10 06:00:11,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23231945459520)>', '<ExcThread(monitor, started 23231705917184)>']
[2026-03-10 07:00:17] 2026-03-10 06:00:15,562 | INFO     | PID=1720957 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 07:00:17] 2026-03-10 06:00:15,562 | INFO     | .. there are 15 such processes running
[2026-03-10 07:00:17] 2026-03-10 06:00:15,563 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 07:00:17] 2026-03-10 06:00:15,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 07:00:17] 2026-03-10 06:00:15,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 07:00:17] 2026-03-10 06:00:15,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 07:00:17] 2026-03-10 06:00:15,563 | INFO     | [monitor] control thread has ended
[2026-03-10 07:00:17] 2026-03-10 06:00:16,878 | INFO     | all workflow threads have been joined
[2026-03-10 07:00:17] 2026-03-10 06:00:16,878 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 07:00:17] 2026-03-10 06:00:16,878 | INFO     | traces error code: 0
[2026-03-10 07:00:17] 2026-03-10 06:00:16,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 07:00:17] 2026-03-10 06:00:17,000 [wrapper] ==== pilot stdout END ====
[2026-03-10 07:00:17] 2026-03-10 06:00:17,003 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 07:00:17] 2026-03-10 06:00:17,006 [wrapper] pilotpid: 1720957
[2026-03-10 07:00:17] 2026-03-10 06:00:17,009 [wrapper] Pilot exit status: 0
[2026-03-10 07:00:17] 2026-03-10 06:00:17,018 [wrapper] pandaids: 7047693573
[2026-03-10 07:00:17] 2026-03-10 06:00:17,065 [wrapper] cleanup supervisor_pilot 1984288 1720958
[2026-03-10 07:00:17] 2026-03-10 06:00:17,069 [wrapper] Test setup, not cleaning
[2026-03-10 07:00:17] 2026-03-10 06:00:17,071 [wrapper] apfmon messages muted
[2026-03-10 07:00:17] 2026-03-10 06:00:17,073 [wrapper] ==== wrapper stdout END ====
[2026-03-10 07:00:17] 2026-03-10 06:00:17,074 [wrapper] ==== wrapper stderr END ====
[2026-03-10 07:00:17]  *** Error codes and diagnostics ***
[2026-03-10 07:00:17]     "exeErrorCode": 0,
[2026-03-10 07:00:17]     "exeErrorDiag": "",
[2026-03-10 07:00:17]     "pilotErrorCode": 0,
[2026-03-10 07:00:17]     "pilotErrorDiag": "",
[2026-03-10 07:00:17]  *** Listing of results directory ***
[2026-03-10 07:00:17] total 441280
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc    584627 Mar  9 21:32 pilot3.tar.gz
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc      5111 Mar  9 21:43 queuedata.json
[2026-03-10 07:00:17] -rwx------. 1 boinc boinc     36322 Mar  9 21:43 runpilot2-wrapper.sh
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 07:00:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:54 run_atlas
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:54 job.xml
[2026-03-10 07:00:17] -rw-r--r--. 2 boinc boinc 261399996 Mar 10 03:54 EVNT.48958608._000053.pool.root.1
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc      6560 Mar 10 03:54 init_data.xml
[2026-03-10 07:00:17] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:54 start_atlas.sh
[2026-03-10 07:00:17] drwxrwx--x. 2 boinc boinc      4096 Mar 10 03:54 shared
[2026-03-10 07:00:17] -rw-r--r--. 2 boinc boinc    597933 Mar 10 03:54 input.tar.gz
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:54 boinc_lockfile
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc      2527 Mar 10 03:54 pandaJob.out
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc   1002338 Mar 10 03:54 agis_schedconf.cvmfs.json
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc       451 Mar 10 03:54 workernode_map.json
[2026-03-10 07:00:17] drwx------. 5 boinc boinc      4096 Mar 10 03:54 pilot3
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc 182656656 Mar 10 06:59 HITS.48958610._001360.pool.root.1
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc       530 Mar 10 06:59 boinc_task_state.xml
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc      1034 Mar 10 06:59 memory_monitor_summary.json
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc   1511578 Mar 10 06:59 agis_ddmendpoints.agis.ALL.json
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc    363371 Mar 10 06:59 log.48958610._001360.job.log.tgz.1
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc      6397 Mar 10 06:59 heartbeat.json
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc      8192 Mar 10 06:59 boinc_mmap_file
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc        28 Mar 10 06:59 wrapper_checkpoint.txt
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc        95 Mar 10 07:00 pilot_heartbeat.json
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc      4829 Mar 10 07:00 pilotlog.txt
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc   1578916 Mar 10 07:00 log.48958610._001360.job.log.1
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc       357 Mar 10 07:00 output.list
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc       620 Mar 10 07:00 runtime_log
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc   1955840 Mar 10 07:00 result.tar.gz
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc      9205 Mar 10 07:00 runtime_log.err
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc       665 Mar 10 07:00 5eqMDmpcwJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm54aLDmw7mn7m.diag
[2026-03-10 07:00:17] -rw-r--r--. 1 boinc boinc     20896 Mar 10 07:00 stderr.txt
[2026-03-10 07:00:17] HITS file was successfully produced:
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc 182656656 Mar 10 06:59 shared/HITS.pool.root.1
[2026-03-10 07:00:17]  *** Contents of shared directory: ***
[2026-03-10 07:00:17] total 436172
[2026-03-10 07:00:17] -rw-r--r--. 2 boinc boinc 261399996 Mar 10 03:54 ATLAS.root_0
[2026-03-10 07:00:17] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:54 start_atlas.sh
[2026-03-10 07:00:17] -rw-r--r--. 2 boinc boinc    597933 Mar 10 03:54 input.tar.gz
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc 182656656 Mar 10 06:59 HITS.pool.root.1
[2026-03-10 07:00:17] -rw-------. 1 boinc boinc   1955840 Mar 10 07:00 result.tar.gz
07:00:18 (1716738): run_atlas exited; CPU time 42740.494713
07:00:18 (1716738): called boinc_finish(0)

</stderr_txt>
]]>

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