Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:32:24 (1963597): wrapper (7.7.26015): starting
08:32:24 (1963597): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 08:32:25] Arguments: --nthreads 4
[2026-03-10 08:32:25] Threads: 4
[2026-03-10 08:32:25] Checking for CVMFS
[2026-03-10 08:32:25] No cvmfs_config command found, will try listing directly
[2026-03-10 08:32:25] CVMFS is ok
[2026-03-10 08:32:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 08:32:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 08:32:25] Further information can be found at the LHC@home message board.
[2026-03-10 08:32:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 08:32:25] Checking for apptainer binary...
[2026-03-10 08:32:25] which: no apptainer in ((null))
[2026-03-10 08:32:25] apptainer is not installed, using version from CVMFS
[2026-03-10 08:32:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 08:32:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-10 08:32:25] apptainer works
[2026-03-10 08:32:25] Set ATHENA_PROC_NUMBER=4
[2026-03-10 08:32:25] Set ATHENA_CORE_NUMBER=4
[2026-03-10 08:32:25] Starting ATLAS job with PandaID=7041180512
[2026-03-10 08:32:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 09:48:07]  *** The last 200 lines of the pilot log: ***
[2026-03-10 09:48:07]  scope=mc23_13p6TeV
[2026-03-10 09:48:07]  status=None
[2026-03-10 09:48:07]  status_code=0
[2026-03-10 09:48:07]  storage_token=
[2026-03-10 09:48:07]  surl=/var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/log.48955015._010395.job.log.tgz.1
[2026-03-10 09:48:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/0e/log.48955015._010395.job.log.tgz.1
[2026-03-10 09:48:07]  workdir=None
[2026-03-10 09:48:07] ]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,575 | INFO     | transferring file log.48955015._010395.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/log.48955015._010395.job.log.tgz.1 to /var/lib/b
[2026-03-10 09:48:07] 2026-03-10 08:47:34,576 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/log.48955015._010395.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/7/lo
[2026-03-10 09:48:07] 2026-03-10 08:47:34,591 | INFO     | adding to output.list: log.48955015._010395.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/0e/log.48955015._010395.job.log.tg
[2026-03-10 09:48:07] 2026-03-10 08:47:34,592 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 09:48:07] 2026-03-10 08:47:34,592 | INFO     | summary of transferred files:
[2026-03-10 09:48:07] 2026-03-10 08:47:34,592 | INFO     |  -- lfn=log.48955015._010395.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 09:48:07] 2026-03-10 08:47:34,592 | INFO     | stage-out finished correctly
[2026-03-10 09:48:07] 2026-03-10 08:47:34,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 09:48:07] 2026-03-10 08:47:34,689 | INFO     | job 7041180512 has state=finished
[2026-03-10 09:48:07] 2026-03-10 08:47:34,689 | INFO     | preparing for final server update for job 7041180512 in state='finished'
[2026-03-10 09:48:07] 2026-03-10 08:47:34,689 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/jobReport.json
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/7/workernode_map.json
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | INFO     | this job has now completed (state=finished)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | INFO     | log transfer has been attempted: DONE
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | INFO     | job 7041180512 has finished - writing final server update
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2033842/.job.ad'
[2026-03-10 09:48:07] 2026-03-10 08:47:34,691 | INFO     | total number of processed events: 400 (read)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,709 | INFO     | using path: /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,709 | INFO     | extracted standard info from prmon json
[2026-03-10 09:48:07] 2026-03-10 08:47:34,709 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 09:48:07] 2026-03-10 08:47:34,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 09:48:07] 2026-03-10 08:47:34,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 09:48:07] 2026-03-10 08:47:34,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | fitting pss+swap vs Time
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | sum of square deviations: 93240818.0
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | sum of deviations: -66122901.999999985
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | mean x: 1773130295.0
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | mean y: 2336496.850746269
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | intersect: 1259774207.5486088
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | chi2: 0.0004262388092992966
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | current memory leak: -0.71 B/s (using 67 data points, chi2=0.00)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | could have reported an average CPU frequency of 3605 MHz (6 samples)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | ..............................
[2026-03-10 09:48:07] 2026-03-10 08:47:34,711 | INFO     | . Timing measurements:
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . get job = 0 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . initial setup = 4 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . payload setup = 4 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . stage-in = 0 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . payload execution = 4478 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . stage-out = 0 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | . log creation = 0 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,712 | INFO     | ..............................
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | 
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | job summary report
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | --------------------------------------------------
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | PanDA job id: 7041180512
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | task id: 48955015
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | errors: (none)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | pilot state: finished 
[2026-03-10 09:48:07] 2026-03-10 08:47:34,818 | INFO     | transexitcode: 0
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | exeerrorcode: 0
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | exeerrordiag: 
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | exitcode: 0
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | exitmsg: OK
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | cpuconsumptiontime: 17077 s
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | nevents: 400
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | neventsw: 0
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | pid: 1981125
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | pgrp: 1981125
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | corecount: 4
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | event service: False
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | sizes: {0: 2280249, 11: 2280249, 4486: 2315580}
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | --------------------------------------------------
[2026-03-10 09:48:07] 2026-03-10 08:47:34,819 | INFO     | 
[2026-03-10 09:48:07] 2026-03-10 08:47:34,820 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/7
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 09:48:07] 2026-03-10 08:47:34,838 | INFO     | job 7041180512 has completed (purged errors)
[2026-03-10 09:48:07] 2026-03-10 08:47:34,839 | INFO     | overall cleanup function is called
[2026-03-10 09:48:07] 2026-03-10 08:47:35,846 | INFO     | --- collectZombieJob: --- 10, [1981125]
[2026-03-10 09:48:07] 2026-03-10 08:47:35,846 | INFO     | zombie collector waiting for pid 1981125
[2026-03-10 09:48:07] 2026-03-10 08:47:35,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 09:48:07] 2026-03-10 08:47:35,846 | INFO     | collected zombie processes
[2026-03-10 09:48:07] 2026-03-10 08:47:35,846 | INFO     | will attempt to kill all subprocesses of pid=1981125
[2026-03-10 09:48:07] 2026-03-10 08:47:36,249 | INFO     | process IDs to be killed: [1981125] (in reverse order)
[2026-03-10 09:48:07] 2026-03-10 08:47:36,443 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 09:48:07] 2026-03-10 08:47:36,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 09:48:07] 2026-03-10 08:47:36,467 | INFO     | did not find any defunct processes belonging to 1981125
[2026-03-10 09:48:07] 2026-03-10 08:47:36,490 | INFO     | did not find any defunct processes belonging to 1981125
[2026-03-10 09:48:07] 2026-03-10 08:47:36,490 | INFO     | ready for new job
[2026-03-10 09:48:07] 2026-03-10 08:47:36,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 09:48:07] 2026-03-10 08:47:36,491 | INFO     | **************************************
[2026-03-10 09:48:07] 2026-03-10 08:47:36,491 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 09:48:07] 2026-03-10 08:47:36,491 | INFO     | **************************************
[2026-03-10 09:48:07] 2026-03-10 08:47:36,491 | INFO     | 
[2026-03-10 09:48:07] 2026-03-10 08:47:36,496 | INFO     | architecture information:
[2026-03-10 09:48:07] 2026-03-10 08:47:36,497 | INFO     | executing command: cat /etc/os-release
[2026-03-10 09:48:07] 2026-03-10 08:47:36,509 | INFO     | cat /etc/os-release:
[2026-03-10 09:48:07] NAME="CentOS Linux"
[2026-03-10 09:48:07] VERSION="7 (Core)"
[2026-03-10 09:48:07] ID="centos"
[2026-03-10 09:48:07] ID_LIKE="rhel fedora"
[2026-03-10 09:48:07] VERSION_ID="7"
[2026-03-10 09:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 09:48:07] ANSI_COLOR="0;31"
[2026-03-10 09:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 09:48:07] HOME_URL="https://www.centos.org/"
[2026-03-10 09:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 09:48:07] 
[2026-03-10 09:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 09:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 09:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 09:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 09:48:07] 
[2026-03-10 09:48:07] 2026-03-10 08:47:36,509 | INFO     | **************************************
[2026-03-10 09:48:07] 2026-03-10 08:47:37,011 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/7
[2026-03-10 09:48:07] 2026-03-10 08:47:37,022 | INFO     | sufficient remaining disk space (20087570432 B)
[2026-03-10 09:48:07] 2026-03-10 08:47:37,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 09:48:07] 2026-03-10 08:47:37,022 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 09:48:07] 2026-03-10 08:47:37,022 | INFO     | update_server=False
[2026-03-10 09:48:07] 2026-03-10 08:47:37,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 09:48:07] 2026-03-10 08:47:37,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 09:48:07] 2026-03-10 08:47:37,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 09:48:07] 2026-03-10 08:47:37,658 | INFO     | all data control threads have been joined
[2026-03-10 09:48:07] 2026-03-10 08:47:37,828 | INFO     | all payload control threads have been joined
[2026-03-10 09:48:07] 2026-03-10 08:47:38,028 | INFO     | [job] retrieve thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,068 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,233 | INFO     | all job control threads have been joined
[2026-03-10 09:48:07] 2026-03-10 08:47:38,269 | INFO     | [payload] failed_post thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,311 | INFO     | [payload] validate_post thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,578 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,663 | INFO     | [data] control thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,830 | INFO     | [payload] control thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:38,970 | INFO     | [job] validate thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:39,039 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:39,066 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:39,093 | WARNING  | process 1981125 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 09:48:07] 2026-03-10 08:47:39,238 | INFO     | [job] control thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:39,333 | INFO     | [data] copytool_in thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:39,366 | INFO     | using path: /var/lib/boinc/var/slot56/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:48:07] 2026-03-10 08:47:39,367 | INFO     | using path: /var/lib/boinc/var/slot56/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:48:07] 2026-03-10 08:47:39,367 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 09:48:07] 2026-03-10 08:47:39,367 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 09:48:07] 2026-03-10 08:47:39,367 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/payload.stdout) since it has not been created yet
[2026-03-10 09:48:07] 2026-03-10 08:47:39,367 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/7
[2026-03-10 09:48:07] 2026-03-10 08:47:39,382 | INFO     | sufficient remaining disk space (20086521856 B)
[2026-03-10 09:48:07] 2026-03-10 08:47:39,382 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-10 09:48:07] 2026-03-10 08:47:39,382 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot56/slots/7/PanDA_Pilot-7041180512/HITS.48955015._010395.pool.root.1 since it does not exist
[2026-03-10 09:48:07] 2026-03-10 08:47:39,652 | INFO     | [data] copytool_out thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:39,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:48:07] 2026-03-10 08:47:39,791 | INFO     | number of running child processes to parent process 1981125: 1
[2026-03-10 09:48:07] 2026-03-10 08:47:39,791 | INFO     | maximum number of monitored processes: 6
[2026-03-10 09:48:07] 2026-03-10 08:47:39,791 | INFO     | aborting job monitoring since job object (job id=7041180512) has expired
[2026-03-10 09:48:07] 2026-03-10 08:47:39,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:48:07] 2026-03-10 08:47:39,791 | INFO     | will abort loop
[2026-03-10 09:48:07] 2026-03-10 08:47:40,775 | INFO     | [job] queue monitor thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:40,796 | INFO     | [job] job monitor thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:41,026 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 09:48:07] 2026-03-10 08:47:43,666 | INFO     | [monitor] cgroup control has ended
[2026-03-10 09:48:07] 2026-03-10 08:47:44,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22737399535424)>', '<ExcThread(monitor, started 22737157625600)>']
[2026-03-10 09:48:07] 2026-03-10 08:47:49,694 | INFO     | all workflow threads have been joined
[2026-03-10 09:48:07] 2026-03-10 08:47:49,694 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 09:48:07] 2026-03-10 08:47:49,694 | INFO     | traces error code: 0
[2026-03-10 09:48:07] 2026-03-10 08:47:49,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | INFO     | PID=1968183 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | INFO     | .. there are 53 such processes running
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | CRITICAL | thread 'MainThread' is not alive
[2026-03-10 09:48:07] 2026-03-10 08:48:07,053 | INFO     | [monitor] control thread has ended
[2026-03-10 09:48:07] 2026-03-10 08:48:07,182 [wrapper] ==== pilot stdout END ====
[2026-03-10 09:48:07] 2026-03-10 08:48:07,183 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 09:48:07] 2026-03-10 08:48:07,185 [wrapper] pilotpid: 1968183
[2026-03-10 09:48:07] 2026-03-10 08:48:07,187 [wrapper] Pilot exit status: 0
[2026-03-10 09:48:07] 2026-03-10 08:48:07,193 [wrapper] pandaids: 7041180512
[2026-03-10 09:48:07] 2026-03-10 08:48:07,301 [wrapper] cleanup supervisor_pilot 2733897 1968184
[2026-03-10 09:48:07] 2026-03-10 08:48:07,303 [wrapper] Test setup, not cleaning
[2026-03-10 09:48:07] 2026-03-10 08:48:07,306 [wrapper] apfmon messages muted
[2026-03-10 09:48:07] 2026-03-10 08:48:07,308 [wrapper] ==== wrapper stdout END ====
[2026-03-10 09:48:07] 2026-03-10 08:48:07,310 [wrapper] ==== wrapper stderr END ====
[2026-03-10 09:48:07]  *** Error codes and diagnostics ***
[2026-03-10 09:48:07]     "exeErrorCode": 0,
[2026-03-10 09:48:07]     "exeErrorDiag": "",
[2026-03-10 09:48:07]     "pilotErrorCode": 0,
[2026-03-10 09:48:07]     "pilotErrorDiag": "",
[2026-03-10 09:48:07]  *** Listing of results directory ***
[2026-03-10 09:48:07] total 619824
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc    584627 Mar  9 20:33 pilot3.tar.gz
[2026-03-10 09:48:07] -rwx------. 1 boinc boinc     36322 Mar  9 20:36 runpilot2-wrapper.sh
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc      5111 Mar  9 20:39 queuedata.json
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc       100 Mar 10 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 09:48:07] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 08:32 run_atlas
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc       105 Mar 10 08:32 job.xml
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc      6705 Mar 10 08:32 init_data.xml
[2026-03-10 09:48:07] -rw-r--r--. 2 boinc boinc 443957828 Mar 10 08:32 EVNT.46701403._002260.pool.root.1
[2026-03-10 09:48:07] -rw-r--r--. 2 boinc boinc     15845 Mar 10 08:32 start_atlas.sh
[2026-03-10 09:48:07] drwxrwx--x. 2 boinc boinc      4096 Mar 10 08:32 shared
[2026-03-10 09:48:07] -rw-r--r--. 2 boinc boinc    597960 Mar 10 08:32 input.tar.gz
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc         0 Mar 10 08:32 boinc_lockfile
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc      2572 Mar 10 08:32 pandaJob.out
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc   1005057 Mar 10 08:32 agis_schedconf.cvmfs.json
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc   1511578 Mar 10 08:32 agis_ddmendpoints.agis.ALL.json
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc       442 Mar 10 08:32 workernode_map.json
[2026-03-10 09:48:07] drwx------. 5 boinc boinc      4096 Mar 10 08:32 pilot3
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc        95 Mar 10 09:47 pilot_heartbeat.json
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc 184898164 Mar 10 09:47 HITS.48955015._010395.pool.root.1
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc      1030 Mar 10 09:47 memory_monitor_summary.json
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc    284576 Mar 10 09:47 log.48955015._010395.job.log.tgz.1
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc      6356 Mar 10 09:47 heartbeat.json
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc       530 Mar 10 09:47 boinc_task_state.xml
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc      8192 Mar 10 09:48 boinc_mmap_file
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc        27 Mar 10 09:48 wrapper_checkpoint.txt
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc       893 Mar 10 09:48 pilotlog.txt
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc    667396 Mar 10 09:48 log.48955015._010395.job.log.1
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc       357 Mar 10 09:48 output.list
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc       620 Mar 10 09:48 runtime_log
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc    972800 Mar 10 09:48 result.tar.gz
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc      9204 Mar 10 09:48 runtime_log.err
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc       662 Mar 10 09:48 ipZNDm6ZvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmD4aLDm6c46Fm.diag
[2026-03-10 09:48:07] -rw-r--r--. 1 boinc boinc     21975 Mar 10 09:48 stderr.txt
[2026-03-10 09:48:07] HITS file was successfully produced:
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc 184898164 Mar 10 09:47 shared/HITS.pool.root.1
[2026-03-10 09:48:07]  *** Contents of shared directory: ***
[2026-03-10 09:48:07] total 615684
[2026-03-10 09:48:07] -rw-r--r--. 2 boinc boinc 443957828 Mar 10 08:32 ATLAS.root_0
[2026-03-10 09:48:07] -rw-r--r--. 2 boinc boinc     15845 Mar 10 08:32 start_atlas.sh
[2026-03-10 09:48:07] -rw-r--r--. 2 boinc boinc    597960 Mar 10 08:32 input.tar.gz
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc 184898164 Mar 10 09:47 HITS.pool.root.1
[2026-03-10 09:48:07] -rw-------. 1 boinc boinc    972800 Mar 10 09:48 result.tar.gz
09:48:09 (1963597): run_atlas exited; CPU time 17261.012721
09:48:09 (1963597): called boinc_finish(0)

</stderr_txt>
]]>

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