Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:53 (3355871): wrapper (7.7.26015): starting
11:37:53 (3355871): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 11:37:53] Arguments: --nthreads 4
[2026-03-10 11:37:53] Threads: 4
[2026-03-10 11:37:53] Checking for CVMFS
[2026-03-10 11:37:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 11:37:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 11:37:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 11:37:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 11:37:54] 2.9.2.0 150552 18303 82192 157111 3 50 33110689 36864000 0 130560 0 8276486 99.985 677547 11679 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 11:37:54] CVMFS is ok
[2026-03-10 11:37:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 11:37:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 11:37:54] Further information can be found at the LHC@home message board.
[2026-03-10 11:37:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 11:37:54] Checking for apptainer binary...
[2026-03-10 11:37:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 11:37:54] Running /usr/bin/apptainer --version
[2026-03-10 11:37:54] apptainer version 1.4.1-1.1
[2026-03-10 11:37:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 11:37:54] thA317
[2026-03-10 11:37:54] apptainer works
[2026-03-10 11:37:54] Set ATHENA_PROC_NUMBER=4
[2026-03-10 11:37:54] Set ATHENA_CORE_NUMBER=4
[2026-03-10 11:37:54] Starting ATLAS job with PandaID=7041367840
[2026-03-10 11:37:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 12:48:17]  *** The last 200 lines of the pilot log: ***
[2026-03-10 12:48:17] HOME_URL="https://www.centos.org/"
[2026-03-10 12:48:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 12:48:17] 
[2026-03-10 12:48:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 12:48:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 12:48:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 12:48:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 12:48:17] 
[2026-03-10 12:48:17] 2026-03-10 11:47:24,971 | INFO     | **************************************
[2026-03-10 12:48:17] 2026-03-10 11:47:25,232 | WARNING  | process 3364486 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 12:48:17] 2026-03-10 11:47:25,275 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 12:48:17] 2026-03-10 11:47:25,329 | INFO     | number of running child processes to parent process 3364486: 1
[2026-03-10 12:48:17] 2026-03-10 11:47:25,329 | INFO     | maximum number of monitored processes: 7
[2026-03-10 12:48:17] 2026-03-10 11:47:25,329 | INFO     | aborting job monitoring since job object (job id=7041367840) has expired
[2026-03-10 12:48:17] 2026-03-10 11:47:25,474 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-10 12:48:17] 2026-03-10 11:47:25,492 | INFO     | sufficient remaining disk space (223660212224 B)
[2026-03-10 12:48:17] 2026-03-10 11:47:25,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 12:48:17] 2026-03-10 11:47:25,492 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 12:48:17] 2026-03-10 11:47:25,492 | INFO     | update_server=False
[2026-03-10 12:48:17] 2026-03-10 11:47:25,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 12:48:17] 2026-03-10 11:47:25,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:48:17] 2026-03-10 11:47:25,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 12:48:17] 2026-03-10 11:47:25,493 | INFO     | will abort loop
[2026-03-10 12:48:17] 2026-03-10 11:47:25,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:48:17] 2026-03-10 11:47:25,715 | INFO     | all job control threads have been joined
[2026-03-10 12:48:17] 2026-03-10 11:47:25,959 | INFO     | all payload control threads have been joined
[2026-03-10 12:48:17] 2026-03-10 11:47:25,968 | INFO     | all data control threads have been joined
[2026-03-10 12:48:17] 2026-03-10 11:47:26,497 | INFO     | [job] job monitor thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,497 | INFO     | [job] retrieve thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,499 | INFO     | [job] queue monitor thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,658 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,720 | INFO     | [job] control thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,821 | INFO     | [data] copytool_in thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,911 | INFO     | [job] validate thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,964 | INFO     | [payload] control thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:26,973 | INFO     | [data] control thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:27,054 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:27,059 | INFO     | [payload] failed_post thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:27,400 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:27,499 | INFO     | [data] copytool_out thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:27,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 12:48:17] 2026-03-10 11:47:27,815 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:27,938 | INFO     | [payload] validate_post thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:31,727 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 12:48:17] 2026-03-10 11:47:56,203 | INFO     | PID=3359982 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 12:48:17] 2026-03-10 11:47:56,203 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 12:48:17] 2026-03-10 11:47:56,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 12:48:17] 2026-03-10 11:47:56,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 12:48:17] 2026-03-10 11:48:12,079 | INFO     | [monitor] cgroup control has ended
[2026-03-10 12:48:17] 2026-03-10 11:48:12,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616963528512)>', '<ExcThread(monitor, started 140616474285824)>']
[2026-03-10 12:48:17] 2026-03-10 11:48:13,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 12:48:17] 2026-03-10 11:48:13,292 | INFO     | [monitor] control thread has ended
[2026-03-10 12:48:17] 2026-03-10 11:48:17,675 | INFO     | all workflow threads have been joined
[2026-03-10 12:48:17] 2026-03-10 11:48:17,675 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 12:48:17] 2026-03-10 11:48:17,675 | INFO     | traces error code: 0
[2026-03-10 12:48:17] 2026-03-10 11:48:17,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 12:48:17] 2026-03-10 11:48:17,761 [wrapper] ==== pilot stdout END ====
[2026-03-10 12:48:17] 2026-03-10 11:48:17,765 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 12:48:17] 2026-03-10 11:48:17,770 [wrapper] pilotpid: 3359982
[2026-03-10 12:48:17] 2026-03-10 11:48:17,774 [wrapper] Pilot exit status: 0
[2026-03-10 12:48:17] 2026-03-10 11:48:17,786 [wrapper] pandaids: 7041367840
[2026-03-10 12:48:17] 2026-03-10 11:48:17,812 [wrapper] cleanup supervisor_pilot 3370443 3359983
[2026-03-10 12:48:17] 2026-03-10 11:48:17,816 [wrapper] Test setup, not cleaning
[2026-03-10 12:48:17] 2026-03-10 11:48:17,820 [wrapper] apfmon messages muted
[2026-03-10 12:48:17] 2026-03-10 11:48:17,824 [wrapper] ==== wrapper stdout END ====
[2026-03-10 12:48:17] 2026-03-10 11:48:17,828 [wrapper] ==== wrapper stderr END ====
[2026-03-10 12:48:17]  *** Error codes and diagnostics ***
[2026-03-10 12:48:17]     "exeErrorCode": 0,
[2026-03-10 12:48:17]     "exeErrorDiag": "",
[2026-03-10 12:48:17]     "pilotErrorCode": 0,
[2026-03-10 12:48:17]     "pilotErrorDiag": "",
[2026-03-10 12:48:17]  *** Listing of results directory ***
[2026-03-10 12:48:17] total 616472
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc    584627 Mar  9 20:33 pilot3.tar.gz
[2026-03-10 12:48:17] -rwx------ 1 boinc boinc     36322 Mar  9 20:36 runpilot2-wrapper.sh
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc      5111 Mar  9 20:39 queuedata.json
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc       100 Mar 10 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 12:48:17] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 11:37 run_atlas
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc       105 Mar 10 11:37 job.xml
[2026-03-10 12:48:17] -rw-r--r-- 2 boinc boinc 439559418 Mar 10 11:37 EVNT.46701403._001418.pool.root.1
[2026-03-10 12:48:17] -rw-r--r-- 2 boinc boinc    597957 Mar 10 11:37 input.tar.gz
[2026-03-10 12:48:17] -rw-r--r-- 2 boinc boinc     15845 Mar 10 11:37 start_atlas.sh
[2026-03-10 12:48:17] drwxrwx--x 2 boinc boinc      4096 Mar 10 11:37 shared
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc         0 Mar 10 11:37 boinc_setup_complete
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc      6376 Mar 10 11:37 init_data.xml
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc         0 Mar 10 11:37 boinc_lockfile
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc      2562 Mar 10 11:37 pandaJob.out
[2026-03-10 12:48:17] -rw------- 1 boinc boinc   1005414 Mar 10 11:38 agis_schedconf.cvmfs.json
[2026-03-10 12:48:17] -rw------- 1 boinc boinc   1511578 Mar 10 11:38 agis_ddmendpoints.agis.ALL.json
[2026-03-10 12:48:17] -rw------- 1 boinc boinc       427 Mar 10 11:38 workernode_map.json
[2026-03-10 12:48:17] drwx------ 5 boinc boinc      4096 Mar 10 11:38 pilot3
[2026-03-10 12:48:17] -rw------- 1 boinc boinc 185998268 Mar 10 12:46 HITS.48955010._020991.pool.root.1
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc       530 Mar 10 12:47 boinc_task_state.xml
[2026-03-10 12:48:17] -rw------- 1 boinc boinc      1052 Mar 10 12:47 memory_monitor_summary.json
[2026-03-10 12:48:17] -rw------- 1 boinc boinc    272733 Mar 10 12:47 log.48955010._020991.job.log.tgz.1
[2026-03-10 12:48:17] -rw------- 1 boinc boinc      6363 Mar 10 12:47 heartbeat.json
[2026-03-10 12:48:17] -rw------- 1 boinc boinc        95 Mar 10 12:47 pilot_heartbeat.json
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc      8192 Mar 10 12:48 boinc_mmap_file
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc        27 Mar 10 12:48 wrapper_checkpoint.txt
[2026-03-10 12:48:17] -rw------- 1 boinc boinc      5272 Mar 10 12:48 pilotlog.txt
[2026-03-10 12:48:17] -rw------- 1 boinc boinc    616476 Mar 10 12:48 log.48955010._020991.job.log.1
[2026-03-10 12:48:17] -rw------- 1 boinc boinc       357 Mar 10 12:48 output.list
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc       620 Mar 10 12:48 runtime_log
[2026-03-10 12:48:17] -rw------- 1 boinc boinc    911360 Mar 10 12:48 result.tar.gz
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc      8896 Mar 10 12:48 runtime_log.err
[2026-03-10 12:48:17] -rw------- 1 boinc boinc       662 Mar 10 12:48 1hDNDm6ZvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmy3aLDmc3cRam.diag
[2026-03-10 12:48:17] -rw-r--r-- 1 boinc boinc      8989 Mar 10 12:48 stderr.txt
[2026-03-10 12:48:17] HITS file was successfully produced:
[2026-03-10 12:48:17] -rw------- 1 boinc boinc 185998268 Mar 10 12:46 shared/HITS.pool.root.1
[2026-03-10 12:48:17]  *** Contents of shared directory: ***
[2026-03-10 12:48:17] total 612400
[2026-03-10 12:48:17] -rw-r--r-- 2 boinc boinc 439559418 Mar 10 11:37 ATLAS.root_0
[2026-03-10 12:48:17] -rw-r--r-- 2 boinc boinc    597957 Mar 10 11:37 input.tar.gz
[2026-03-10 12:48:17] -rw-r--r-- 2 boinc boinc     15845 Mar 10 11:37 start_atlas.sh
[2026-03-10 12:48:17] -rw------- 1 boinc boinc 185998268 Mar 10 12:46 HITS.pool.root.1
[2026-03-10 12:48:17] -rw------- 1 boinc boinc    911360 Mar 10 12:48 result.tar.gz
12:48:19 (3355871): run_atlas exited; CPU time 15463.694216
12:48:19 (3355871): called boinc_finish(0)

</stderr_txt>
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