Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:12 (3467311): wrapper (7.7.26015): starting
20:39:12 (3467311): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 20:39:12] Arguments: --nthreads 4
[2026-03-09 20:39:12] Threads: 4
[2026-03-09 20:39:12] Checking for CVMFS
[2026-03-09 20:39:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 20:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 20:39:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 20:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 20:39:13] 2.13.3.0 1437033 5195 52236 157096 0 50 3333229 4096000 2748 130560 0 3892346 99.991 182368 975 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 20:39:13] CVMFS is ok
[2026-03-09 20:39:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 20:39:13] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 20:39:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 20:39:13] Further information can be found at the LHC@home message board.
[2026-03-09 20:39:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 20:39:13] Checking for apptainer binary...
[2026-03-09 20:39:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 20:39:13] Running /usr/bin/apptainer --version
[2026-03-09 20:39:13] apptainer version 1.4.5
[2026-03-09 20:39:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 20:39:13] T5810-Ubuntu
[2026-03-09 20:39:13] apptainer works
[2026-03-09 20:39:13] Set ATHENA_PROC_NUMBER=4
[2026-03-09 20:39:13] Set ATHENA_CORE_NUMBER=4
[2026-03-09 20:39:13] Starting ATLAS job with PandaID=7041363381
[2026-03-09 20:39:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 23:51:58]  *** The last 200 lines of the pilot log: ***
[2026-03-09 23:51:58] 2026-03-10 03:51:20,710 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,710 | INFO     | log transfer has been attempted: DONE
[2026-03-09 23:51:58] 2026-03-10 03:51:20,710 | INFO     | job 7041363381 has finished - writing final server update
[2026-03-09 23:51:58] 2026-03-10 03:51:20,711 | INFO     | total number of processed events: 400 (read)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,719 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/19/PanDA_Pilot-7041363381/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,720 | INFO     | extracted standard info from prmon json
[2026-03-09 23:51:58] 2026-03-10 03:51:20,720 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 23:51:58] 2026-03-10 03:51:20,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 23:51:58] 2026-03-10 03:51:20,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 23:51:58] 2026-03-10 03:51:20,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 23:51:58] 2026-03-10 03:51:20,724 | INFO     | fitting pss+swap vs Time
[2026-03-09 23:51:58] 2026-03-10 03:51:20,725 | INFO     | sum of square deviations: 2093397390.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,726 | INFO     | sum of deviations: -24014093626.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,726 | INFO     | mean x: 1773108930.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,726 | INFO     | mean y: 2327006.0793650793
[2026-03-09 23:51:58] 2026-03-10 03:51:20,727 | INFO     | intersect: 20342279686.595837
[2026-03-09 23:51:58] 2026-03-10 03:51:20,727 | INFO     | chi2: 2.1383003410206616
[2026-03-09 23:51:58] 2026-03-10 03:51:20,727 | INFO     | sum of square deviations: 1931608310.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,729 | INFO     | sum of deviations: -12682646944.999996
[2026-03-09 23:51:58] 2026-03-10 03:51:20,729 | INFO     | mean x: 1773108777.5
[2026-03-09 23:51:58] 2026-03-10 03:51:20,729 | INFO     | mean y: 2337470.4782608696
[2026-03-09 23:51:58] 2026-03-10 03:51:20,729 | INFO     | intersect: 11644300545.338428
[2026-03-09 23:51:58] 2026-03-10 03:51:20,730 | INFO     | chi2: 1.4819031462826415
[2026-03-09 23:51:58] 2026-03-10 03:51:20,730 | INFO     | current chi2=1.4819031462826415 (change=30.697146801403306 %)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,730 | INFO     | sum of square deviations: 1778377530.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,731 | INFO     | sum of deviations: -12257148581.999998
[2026-03-09 23:51:58] 2026-03-10 03:51:20,732 | INFO     | mean x: 1773108625.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,732 | INFO     | mean y: 2337894.1117318436
[2026-03-09 23:51:58] 2026-03-10 03:51:20,732 | INFO     | intersect: 12223171492.167099
[2026-03-09 23:51:58] 2026-03-10 03:51:20,732 | INFO     | chi2: 1.4800467025710162
[2026-03-09 23:51:58] 2026-03-10 03:51:20,732 | INFO     | current chi2=1.4800467025710162 (change=0.1252742944963842 %)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,732 | INFO     | right removable region: 178
[2026-03-09 23:51:58] 2026-03-10 03:51:20,733 | INFO     | sum of square deviations: 1931608310.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,734 | INFO     | sum of deviations: -44056809458.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,734 | INFO     | mean x: 1773109082.5
[2026-03-09 23:51:58] 2026-03-10 03:51:20,734 | INFO     | mean y: 2345548.0760869565
[2026-03-09 23:51:58] 2026-03-10 03:51:20,735 | INFO     | intersect: 40444048242.94165
[2026-03-09 23:51:58] 2026-03-10 03:51:20,735 | INFO     | chi2: 0.8535851524093786
[2026-03-09 23:51:58] 2026-03-10 03:51:20,735 | INFO     | current chi2=0.8535851524093786 (change=60.08113846149684 %)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,735 | INFO     | sum of square deviations: 1778377530.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,737 | INFO     | sum of deviations: -35377452090.99999
[2026-03-09 23:51:58] 2026-03-10 03:51:20,737 | INFO     | mean x: 1773109235.0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,737 | INFO     | mean y: 2336888.4860335197
[2026-03-09 23:51:58] 2026-03-10 03:51:20,737 | INFO     | intersect: 35274986230.45233
[2026-03-09 23:51:58] 2026-03-10 03:51:20,737 | INFO     | chi2: 0.8135660924974164
[2026-03-09 23:51:58] 2026-03-10 03:51:20,738 | INFO     | current chi2=0.8135660924974164 (change=4.688350049084393 %)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,738 | INFO     | left removable region: 20
[2026-03-09 23:51:58] 2026-03-10 03:51:20,738 | INFO     | sum of square deviations: 1223016419.5
[2026-03-09 23:51:58] 2026-03-10 03:51:20,739 | INFO     | sum of deviations: -12295080608.5
[2026-03-09 23:51:58] 2026-03-10 03:51:20,739 | INFO     | mean x: 1773109204.5
[2026-03-09 23:51:58] 2026-03-10 03:51:20,739 | INFO     | mean y: 2335436.639240506
[2026-03-09 23:51:58] 2026-03-10 03:51:20,740 | INFO     | intersect: 17827542236.3267
[2026-03-09 23:51:58] 2026-03-10 03:51:20,740 | INFO     | chi2: 0.07724642802104391
[2026-03-09 23:51:58] 2026-03-10 03:51:20,740 | INFO     | current memory leak: -10.05 B/s (using 158 data points, chi2=0.08)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | could have reported an average CPU frequency of 2501 MHz (10 samples)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | ..............................
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | . Timing measurements:
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | . get job = 0 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | . initial setup = 7 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | . payload setup = 6 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,741 | INFO     | . stage-in = 0 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,742 | INFO     | . payload execution = 11476 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,742 | INFO     | . stage-out = 2 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,742 | INFO     | . log creation = 0 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,742 | INFO     | ..............................
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | 
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | job summary report
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | --------------------------------------------------
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | PanDA job id: 7041363381
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | task id: 48955010
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | errors: (none)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | pilot state: finished 
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | transexitcode: 0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | exeerrorcode: 0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | exeerrordiag: 
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | exitcode: 0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | exitmsg: OK
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | cpuconsumptiontime: 44595 s
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | nevents: 400
[2026-03-09 23:51:58] 2026-03-10 03:51:20,857 | INFO     | neventsw: 0
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | pid: 3476291
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | pgrp: 3476291
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | corecount: 4
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | event service: False
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | sizes: {0: 2279089, 1: 2280222, 12: 2280222, 11486: 2309520, 11490: 2318548, 11492: 2318604, 11496: 2318926}
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | --------------------------------------------------
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | 
[2026-03-09 23:51:58] 2026-03-10 03:51:20,858 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/19
[2026-03-09 23:51:58] 2026-03-10 03:51:20,884 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,884 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,886 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 23:51:58] 2026-03-10 03:51:20,887 | INFO     | job 7041363381 has completed (purged errors)
[2026-03-09 23:51:58] 2026-03-10 03:51:20,887 | INFO     | overall cleanup function is called
[2026-03-09 23:51:58] 2026-03-10 03:51:21,895 | INFO     | --- collectZombieJob: --- 10, [3476291]
[2026-03-09 23:51:58] 2026-03-10 03:51:21,895 | INFO     | zombie collector waiting for pid 3476291
[2026-03-09 23:51:58] 2026-03-10 03:51:21,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 23:51:58] 2026-03-10 03:51:21,895 | INFO     | collected zombie processes
[2026-03-09 23:51:58] 2026-03-10 03:51:21,895 | INFO     | will attempt to kill all subprocesses of pid=3476291
[2026-03-09 23:51:58] 2026-03-10 03:51:22,120 | INFO     | process IDs to be killed: [3476291] (in reverse order)
[2026-03-09 23:51:58] 2026-03-10 03:51:22,195 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 23:51:58] 2026-03-10 03:51:22,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 23:51:58] 2026-03-10 03:51:22,201 | INFO     | did not find any defunct processes belonging to 3476291
[2026-03-09 23:51:58] 2026-03-10 03:51:22,207 | INFO     | did not find any defunct processes belonging to 3476291
[2026-03-09 23:51:58] 2026-03-10 03:51:22,208 | INFO     | ready for new job
[2026-03-09 23:51:58] 2026-03-10 03:51:22,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 23:51:58] 2026-03-10 03:51:22,210 | INFO     | **************************************
[2026-03-09 23:51:58] 2026-03-10 03:51:22,210 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 23:51:58] 2026-03-10 03:51:22,210 | INFO     | **************************************
[2026-03-09 23:51:58] 2026-03-10 03:51:22,211 | INFO     | 
[2026-03-09 23:51:58] 2026-03-10 03:51:22,213 | INFO     | architecture information:
[2026-03-09 23:51:58] 2026-03-10 03:51:22,213 | INFO     | executing command: cat /etc/os-release
[2026-03-09 23:51:58] 2026-03-10 03:51:22,231 | INFO     | cat /etc/os-release:
[2026-03-09 23:51:58] NAME="CentOS Linux"
[2026-03-09 23:51:58] VERSION="7 (Core)"
[2026-03-09 23:51:58] ID="centos"
[2026-03-09 23:51:58] ID_LIKE="rhel fedora"
[2026-03-09 23:51:58] VERSION_ID="7"
[2026-03-09 23:51:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 23:51:58] ANSI_COLOR="0;31"
[2026-03-09 23:51:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 23:51:58] HOME_URL="https://www.centos.org/"
[2026-03-09 23:51:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 23:51:58] 
[2026-03-09 23:51:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 23:51:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 23:51:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 23:51:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 23:51:58] 
[2026-03-09 23:51:58] 2026-03-10 03:51:22,232 | INFO     | **************************************
[2026-03-09 23:51:58] 2026-03-10 03:51:22,734 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/19
[2026-03-09 23:51:58] 2026-03-10 03:51:22,758 | INFO     | sufficient remaining disk space (405929984000 B)
[2026-03-09 23:51:58] 2026-03-10 03:51:22,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 23:51:58] 2026-03-10 03:51:22,758 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 23:51:58] 2026-03-10 03:51:22,759 | INFO     | update_server=False
[2026-03-09 23:51:58] 2026-03-10 03:51:22,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 23:51:58] 2026-03-10 03:51:22,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:51:58] 2026-03-10 03:51:22,759 | INFO     | aborting loop
[2026-03-09 23:51:58] 2026-03-10 03:51:22,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:51:58] 2026-03-10 03:51:23,393 | INFO     | all job control threads have been joined
[2026-03-09 23:51:58] 2026-03-10 03:51:23,396 | INFO     | all data control threads have been joined
[2026-03-09 23:51:58] 2026-03-10 03:51:23,761 | INFO     | [job] job monitor thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:23,764 | INFO     | [job] retrieve thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:23,765 | INFO     | [job] queue monitor thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:23,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 23:51:58] 2026-03-10 03:51:23,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 23:51:58] 2026-03-10 03:51:23,888 | INFO     | [payload] validate_post thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:23,912 | INFO     | [data] copytool_in thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:24,172 | INFO     | [payload] failed_post thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:24,194 | INFO     | all payload control threads have been joined
[2026-03-09 23:51:58] 2026-03-10 03:51:24,399 | INFO     | [job] control thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:24,401 | INFO     | [data] control thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:24,575 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:24,794 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:24,838 | INFO     | [job] validate thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:25,166 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:25,167 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:25,199 | INFO     | [payload] control thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:25,834 | INFO     | [data] copytool_out thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:27,772 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 23:51:58] 2026-03-10 03:51:51,461 | INFO     | [monitor] cgroup control has ended
[2026-03-09 23:51:58] 2026-03-10 03:51:52,316 | INFO     | PID=3471579 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:51:58] 2026-03-10 03:51:52,316 | INFO     | .. there are 4 such processes running
[2026-03-09 23:51:58] 2026-03-10 03:51:52,316 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 23:51:58] 2026-03-10 03:51:52,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 23:51:58] 2026-03-10 03:51:52,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 23:51:58] 2026-03-10 03:51:53,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128152352888640)>', '<ExcThread(monitor, started 128151858427648)>']
[2026-03-09 23:51:58] 2026-03-10 03:51:53,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 23:51:58] 2026-03-10 03:51:53,322 | INFO     | [monitor] control thread has ended
[2026-03-09 23:51:58] 2026-03-10 03:51:58,049 | INFO     | all workflow threads have been joined
[2026-03-09 23:51:58] 2026-03-10 03:51:58,049 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 23:51:58] 2026-03-10 03:51:58,049 | INFO     | traces error code: 0
[2026-03-09 23:51:58] 2026-03-10 03:51:58,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 23:51:58] 2026-03-10 03:51:58,171 [wrapper] ==== pilot stdout END ====
[2026-03-09 23:51:58] 2026-03-10 03:51:58,176 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 23:51:58] 2026-03-10 03:51:58,180 [wrapper] pilotpid: 3471579
[2026-03-09 23:51:58] 2026-03-10 03:51:58,186 [wrapper] Pilot exit status: 0
[2026-03-09 23:51:58] 2026-03-10 03:51:58,195 [wrapper] pandaids: 7041363381
[2026-03-09 23:51:58] 2026-03-10 03:51:58,222 [wrapper] cleanup supervisor_pilot 3564466 3471580
[2026-03-09 23:51:58] 2026-03-10 03:51:58,225 [wrapper] Test setup, not cleaning
[2026-03-09 23:51:58] 2026-03-10 03:51:58,227 [wrapper] apfmon messages muted
[2026-03-09 23:51:58] 2026-03-10 03:51:58,230 [wrapper] ==== wrapper stdout END ====
[2026-03-09 23:51:58] 2026-03-10 03:51:58,233 [wrapper] ==== wrapper stderr END ====
[2026-03-09 23:51:58]  *** Error codes and diagnostics ***
[2026-03-09 23:51:58]     "exeErrorCode": 0,
[2026-03-09 23:51:58]     "exeErrorDiag": "",
[2026-03-09 23:51:58]     "pilotErrorCode": 0,
[2026-03-09 23:51:58]     "pilotErrorDiag": "",
[2026-03-09 23:51:58]  *** Listing of results directory ***
[2026-03-09 23:51:58] total 610364
[2026-03-09 23:51:58] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  9 15:33 pilot3.tar.gz
[2026-03-09 23:51:58] -rwx------ 1 whitlerd whitlerd     36322 Mar  9 15:33 runpilot2-wrapper.sh
[2026-03-09 23:51:58] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  9 15:34 queuedata.json
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 23:51:58] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 20:39 run_atlas
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 20:39 job.xml
[2026-03-09 23:51:58] -rw-r--r-- 2 whitlerd whitlerd 434493727 Mar  9 20:39 EVNT.46701403._001415.pool.root.1
[2026-03-09 23:51:58] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 20:39 start_atlas.sh
[2026-03-09 23:51:58] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 20:39 shared
[2026-03-09 23:51:58] -rw-r--r-- 2 whitlerd whitlerd    597952 Mar  9 20:39 input.tar.gz
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 20:39 boinc_setup_complete
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd      9087 Mar  9 20:39 init_data.xml
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 20:39 boinc_lockfile
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar  9 20:39 pandaJob.out
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd   1002346 Mar  9 20:39 agis_schedconf.cvmfs.json
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd       434 Mar  9 20:39 workernode_map.json
[2026-03-09 23:51:58] drwx------ 5 whitlerd whitlerd      4096 Mar  9 20:39 pilot3
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd 182496979 Mar  9 23:50 HITS.48955010._020843.pool.root.1
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar  9 23:50 boinc_task_state.xml
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd      1030 Mar  9 23:51 memory_monitor_summary.json
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 23:51 agis_ddmendpoints.agis.ALL.json
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd    383203 Mar  9 23:51 log.48955010._020843.job.log.tgz.1
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd        95 Mar  9 23:51 pilot_heartbeat.json
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd      6350 Mar  9 23:51 heartbeat.json
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd      4835 Mar  9 23:51 pilotlog.txt
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  9 23:51 wrapper_checkpoint.txt
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 23:51 boinc_mmap_file
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd   1660601 Mar  9 23:51 log.48955010._020843.job.log.1
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd       357 Mar  9 23:51 output.list
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 23:51 runtime_log
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd   2058240 Mar  9 23:51 result.tar.gz
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  9 23:51 runtime_log.err
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd       649 Mar  9 23:51 5mpMDmQXvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtzaLDmad0Agn.diag
[2026-03-09 23:51:58] -rw-rw-r-- 1 whitlerd whitlerd     21178 Mar  9 23:51 stderr.txt
[2026-03-09 23:51:58] HITS file was successfully produced:
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd 182496979 Mar  9 23:50 shared/HITS.pool.root.1
[2026-03-09 23:51:58]  *** Contents of shared directory: ***
[2026-03-09 23:51:58] total 605152
[2026-03-09 23:51:58] -rw-r--r-- 2 whitlerd whitlerd 434493727 Mar  9 20:39 ATLAS.root_0
[2026-03-09 23:51:58] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 20:39 start_atlas.sh
[2026-03-09 23:51:58] -rw-r--r-- 2 whitlerd whitlerd    597952 Mar  9 20:39 input.tar.gz
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd 182496979 Mar  9 23:50 HITS.pool.root.1
[2026-03-09 23:51:58] -rw------- 1 whitlerd whitlerd   2058240 Mar  9 23:51 result.tar.gz
23:52:00 (3467311): run_atlas exited; CPU time 44960.356230
23:52:00 (3467311): called boinc_finish(0)

</stderr_txt>
]]>

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