Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:23 (1861047): wrapper (7.7.26015): starting
02:25:23 (1861047): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:25:23] Arguments: --nthreads 4
[2026-03-10 02:25:23] Threads: 4
[2026-03-10 02:25:23] Checking for CVMFS
[2026-03-10 02:25:23] No cvmfs_config command found, will try listing directly
[2026-03-10 02:25:23] CVMFS is ok
[2026-03-10 02:25:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:25:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:25:23] Further information can be found at the LHC@home message board.
[2026-03-10 02:25:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:25:23] Checking for apptainer binary...
[2026-03-10 02:25:23] which: no apptainer in ((null))
[2026-03-10 02:25:23] apptainer is not installed, using version from CVMFS
[2026-03-10 02:25:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:25:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-10 02:25:24] apptainer works
[2026-03-10 02:25:24] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:25:24] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:25:24] Starting ATLAS job with PandaID=7041222443
[2026-03-10 02:25:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 03:41:49]  *** The last 200 lines of the pilot log: ***
[2026-03-10 03:41:49]  lfn=log.48955010._020559.job.log.tgz.1
[2026-03-10 03:41:49]  mtime=0
[2026-03-10 03:41:49]  protocol_id=None
[2026-03-10 03:41:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 03:41:49]  replicas=None
[2026-03-10 03:41:49]  scope=mc23_13p6TeV
[2026-03-10 03:41:49]  status=None
[2026-03-10 03:41:49]  status_code=0
[2026-03-10 03:41:49]  storage_token=
[2026-03-10 03:41:49]  surl=/var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7041222443/log.48955010._020559.job.log.tgz.1
[2026-03-10 03:41:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/aa/log.48955010._020559.job.log.tgz.1
[2026-03-10 03:41:49]  workdir=None
[2026-03-10 03:41:49] ]
[2026-03-10 03:41:49] 2026-03-10 02:40:51,732 | INFO     | transferring file log.48955010._020559.job.log.tgz.1 from /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7041222443/log.48955010._020559.job.log.tgz.1 to /var/lib/b
[2026-03-10 03:41:49] 2026-03-10 02:40:51,732 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7041222443/log.48955010._020559.job.log.tgz.1 /var/lib/boinc/var/slot20/slots/7/lo
[2026-03-10 03:41:49] 2026-03-10 02:40:51,747 | INFO     | adding to output.list: log.48955010._020559.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/aa/log.48955010._020559.job.log.tg
[2026-03-10 03:41:49] 2026-03-10 02:40:51,748 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 03:41:49] 2026-03-10 02:40:51,748 | INFO     | summary of transferred files:
[2026-03-10 03:41:49] 2026-03-10 02:40:51,748 | INFO     |  -- lfn=log.48955010._020559.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 03:41:49] 2026-03-10 02:40:51,748 | INFO     | stage-out finished correctly
[2026-03-10 03:41:49] 2026-03-10 02:40:51,800 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 03:41:49] 2026-03-10 02:40:52,932 | INFO     | time since job start (4517s) is within the limit (349056.0s)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,741 | INFO     | job 7041222443 has state=finished
[2026-03-10 03:41:49] 2026-03-10 02:40:53,741 | INFO     | preparing for final server update for job 7041222443 in state='finished'
[2026-03-10 03:41:49] 2026-03-10 02:40:53,742 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7041222443/jobReport.json
[2026-03-10 03:41:49] 2026-03-10 02:40:53,743 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/7/workernode_map.json
[2026-03-10 03:41:49] 2026-03-10 02:40:53,743 | INFO     | this job has now completed (state=finished)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,744 | INFO     | log transfer has been attempted: DONE
[2026-03-10 03:41:49] 2026-03-10 02:40:53,744 | INFO     | job 7041222443 has finished - writing final server update
[2026-03-10 03:41:49] 2026-03-10 02:40:53,744 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3464329/.job.ad'
[2026-03-10 03:41:49] 2026-03-10 02:40:53,744 | INFO     | total number of processed events: 400 (read)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,762 | INFO     | using path: /var/lib/boinc/var/slot20/slots/7/PanDA_Pilot-7041222443/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,763 | INFO     | extracted standard info from prmon json
[2026-03-10 03:41:49] 2026-03-10 02:40:53,763 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 03:41:49] 2026-03-10 02:40:53,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 03:41:49] 2026-03-10 02:40:53,763 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 03:41:49] 2026-03-10 02:40:53,763 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 03:41:49] 2026-03-10 02:40:53,764 | INFO     | fitting pss+swap vs Time
[2026-03-10 03:41:49] 2026-03-10 02:40:53,764 | INFO     | sum of square deviations: 93240818.0
[2026-03-10 03:41:49] 2026-03-10 02:40:53,764 | INFO     | sum of deviations: -388212722.99999994
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | mean x: 1773108273.0
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | mean y: 2332652.4029850746
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | intersect: 7384755990.164321
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | chi2: 0.00028758083297832505
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | current memory leak: -4.16 B/s (using 67 data points, chi2=0.00)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | could have reported an average CPU frequency of 3584 MHz (6 samples)
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | ..............................
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . Timing measurements:
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . get job = 0 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . initial setup = 4 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . payload setup = 4 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . stage-in = 0 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . payload execution = 4496 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . stage-out = 0 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | . log creation = 0 s
[2026-03-10 03:41:49] 2026-03-10 02:40:53,765 | INFO     | ..............................
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | 
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | job summary report
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | --------------------------------------------------
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | PanDA job id: 7041222443
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | task id: 48955010
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | errors: (none)
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | pilot state: finished 
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | transexitcode: 0
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | exeerrorcode: 0
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | exeerrordiag: 
[2026-03-10 03:41:49] 2026-03-10 02:40:54,071 | INFO     | exitcode: 0
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | exitmsg: OK
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | cpuconsumptiontime: 17276 s
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | nevents: 400
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | neventsw: 0
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | pid: 1879699
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | pgrp: 1879699
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | corecount: 4
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | event service: False
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | sizes: {0: 2279812, 1: 2280216, 11: 2280216, 4505: 2306416, 4506: 2315492, 4508: 2315630}
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | --------------------------------------------------
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | 
[2026-03-10 03:41:49] 2026-03-10 02:40:54,072 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/7
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,088 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 03:41:49] 2026-03-10 02:40:54,089 | INFO     | job 7041222443 has completed (purged errors)
[2026-03-10 03:41:49] 2026-03-10 02:40:54,089 | INFO     | overall cleanup function is called
[2026-03-10 03:41:49] 2026-03-10 02:40:54,413 | INFO     | PID=1865569 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:41:49] 2026-03-10 02:40:54,413 | INFO     | .. there are 59 such processes running
[2026-03-10 03:41:49] 2026-03-10 02:40:55,095 | INFO     | --- collectZombieJob: --- 10, [1879699]
[2026-03-10 03:41:49] 2026-03-10 02:40:55,095 | INFO     | zombie collector waiting for pid 1879699
[2026-03-10 03:41:49] 2026-03-10 02:40:55,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 03:41:49] 2026-03-10 02:40:55,095 | INFO     | collected zombie processes
[2026-03-10 03:41:49] 2026-03-10 02:40:55,095 | INFO     | will attempt to kill all subprocesses of pid=1879699
[2026-03-10 03:41:49] 2026-03-10 02:40:55,500 | INFO     | process IDs to be killed: [1879699] (in reverse order)
[2026-03-10 03:41:49] 2026-03-10 02:40:55,709 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 03:41:49] 2026-03-10 02:40:55,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 03:41:49] 2026-03-10 02:40:55,736 | INFO     | did not find any defunct processes belonging to 1879699
[2026-03-10 03:41:49] 2026-03-10 02:40:55,760 | INFO     | did not find any defunct processes belonging to 1879699
[2026-03-10 03:41:49] 2026-03-10 02:40:55,761 | INFO     | ready for new job
[2026-03-10 03:41:49] 2026-03-10 02:40:55,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 03:41:49] 2026-03-10 02:40:55,762 | INFO     | **************************************
[2026-03-10 03:41:49] 2026-03-10 02:40:55,762 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 03:41:49] 2026-03-10 02:40:55,762 | INFO     | **************************************
[2026-03-10 03:41:49] 2026-03-10 02:40:55,762 | INFO     | 
[2026-03-10 03:41:49] 2026-03-10 02:40:55,768 | INFO     | architecture information:
[2026-03-10 03:41:49] 2026-03-10 02:40:55,769 | INFO     | executing command: cat /etc/os-release
[2026-03-10 03:41:49] 2026-03-10 02:40:55,783 | INFO     | cat /etc/os-release:
[2026-03-10 03:41:49] NAME="CentOS Linux"
[2026-03-10 03:41:49] VERSION="7 (Core)"
[2026-03-10 03:41:49] ID="centos"
[2026-03-10 03:41:49] ID_LIKE="rhel fedora"
[2026-03-10 03:41:49] VERSION_ID="7"
[2026-03-10 03:41:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 03:41:49] ANSI_COLOR="0;31"
[2026-03-10 03:41:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 03:41:49] HOME_URL="https://www.centos.org/"
[2026-03-10 03:41:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 03:41:49] 
[2026-03-10 03:41:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 03:41:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 03:41:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 03:41:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 03:41:49] 
[2026-03-10 03:41:49] 2026-03-10 02:40:55,783 | INFO     | **************************************
[2026-03-10 03:41:49] 2026-03-10 02:40:56,285 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/7
[2026-03-10 03:41:49] 2026-03-10 02:40:56,299 | INFO     | sufficient remaining disk space (20166213632 B)
[2026-03-10 03:41:49] 2026-03-10 02:40:56,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 03:41:49] 2026-03-10 02:40:56,299 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 03:41:49] 2026-03-10 02:40:56,299 | INFO     | update_server=False
[2026-03-10 03:41:49] 2026-03-10 02:40:56,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 03:41:49] 2026-03-10 02:40:56,799 | INFO     | all data control threads have been joined
[2026-03-10 03:41:49] 2026-03-10 02:40:57,039 | INFO     | all payload control threads have been joined
[2026-03-10 03:41:49] 2026-03-10 02:40:57,184 | INFO     | all job control threads have been joined
[2026-03-10 03:41:49] 2026-03-10 02:40:57,305 | INFO     | [job] retrieve thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:57,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 03:41:49] 2026-03-10 02:40:57,459 | WARNING  | process 1879699 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 03:41:49] 2026-03-10 02:40:57,735 | INFO     | using path: /var/lib/boinc/var/slot20/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:41:49] 2026-03-10 02:40:57,805 | INFO     | [data] control thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:57,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 03:41:49] 2026-03-10 02:40:58,045 | INFO     | [payload] control thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,107 | INFO     | [payload] failed_post thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,164 | INFO     | number of running child processes to parent process 1879699: 1
[2026-03-10 03:41:49] 2026-03-10 02:40:58,164 | INFO     | maximum number of monitored processes: 6
[2026-03-10 03:41:49] 2026-03-10 02:40:58,164 | INFO     | aborting job monitoring since job object (job id=7041222443) has expired
[2026-03-10 03:41:49] 2026-03-10 02:40:58,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:41:49] 2026-03-10 02:40:58,165 | INFO     | will abort loop
[2026-03-10 03:41:49] 2026-03-10 02:40:58,175 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,190 | INFO     | [job] control thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,238 | INFO     | [job] validate thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,304 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,462 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,652 | INFO     | [payload] validate_post thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,695 | INFO     | [data] copytool_in thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:58,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:41:49] 2026-03-10 02:40:59,169 | INFO     | [job] job monitor thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:59,314 | INFO     | [data] copytool_out thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:40:59,833 | INFO     | [job] queue monitor thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:41:01,865 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:41:07,338 | INFO     | job.realtimelogging is not enabled
[2026-03-10 03:41:49] 2026-03-10 02:41:08,343 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 03:41:49] 2026-03-10 02:41:27,002 | INFO     | PID=1865569 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:41:49] 2026-03-10 02:41:27,002 | INFO     | .. there are 59 such processes running
[2026-03-10 03:41:49] 2026-03-10 02:41:27,003 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 03:41:49] 2026-03-10 02:41:27,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 03:41:49] 2026-03-10 02:41:27,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 03:41:49] 2026-03-10 02:41:42,330 | INFO     | [monitor] cgroup control has ended
[2026-03-10 03:41:49] 2026-03-10 02:41:44,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22914545035072)>', '<ExcThread(monitor, started 22914304059136)>']
[2026-03-10 03:41:49] 2026-03-10 02:41:45,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 03:41:49] 2026-03-10 02:41:45,087 | INFO     | [monitor] control thread has ended
[2026-03-10 03:41:49] 2026-03-10 02:41:49,142 | INFO     | all workflow threads have been joined
[2026-03-10 03:41:49] 2026-03-10 02:41:49,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 03:41:49] 2026-03-10 02:41:49,142 | INFO     | traces error code: 0
[2026-03-10 03:41:49] 2026-03-10 02:41:49,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 03:41:49] 2026-03-10 02:41:49,316 [wrapper] ==== pilot stdout END ====
[2026-03-10 03:41:49] 2026-03-10 02:41:49,319 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 03:41:49] 2026-03-10 02:41:49,320 [wrapper] pilotpid: 1865569
[2026-03-10 03:41:49] 2026-03-10 02:41:49,323 [wrapper] Pilot exit status: 0
[2026-03-10 03:41:49] 2026-03-10 02:41:49,329 [wrapper] pandaids: 7041222443
[2026-03-10 03:41:49] 2026-03-10 02:41:49,442 [wrapper] cleanup supervisor_pilot 2759202 1865570
[2026-03-10 03:41:49] 2026-03-10 02:41:49,444 [wrapper] Test setup, not cleaning
[2026-03-10 03:41:49] 2026-03-10 02:41:49,446 [wrapper] apfmon messages muted
[2026-03-10 03:41:49] 2026-03-10 02:41:49,448 [wrapper] ==== wrapper stdout END ====
[2026-03-10 03:41:49] 2026-03-10 02:41:49,449 [wrapper] ==== wrapper stderr END ====
[2026-03-10 03:41:49]  *** Error codes and diagnostics ***
[2026-03-10 03:41:49]     "exeErrorCode": 0,
[2026-03-10 03:41:49]     "exeErrorDiag": "",
[2026-03-10 03:41:49]     "pilotErrorCode": 0,
[2026-03-10 03:41:49]     "pilotErrorDiag": "",
[2026-03-10 03:41:49]  *** Listing of results directory ***
[2026-03-10 03:41:49] total 624760
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc    584627 Mar  9 20:33 pilot3.tar.gz
[2026-03-10 03:41:49] -rwx------. 1 boinc boinc     36322 Mar  9 20:36 runpilot2-wrapper.sh
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc      5111 Mar  9 20:38 queuedata.json
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 03:41:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:06 run_atlas
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:06 job.xml
[2026-03-10 03:41:49] -rw-r--r--. 2 boinc boinc 446717345 Mar 10 02:25 EVNT.46701403._001410.pool.root.1
[2026-03-10 03:41:49] -rw-r--r--. 2 boinc boinc    597955 Mar 10 02:25 input.tar.gz
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc      6703 Mar 10 02:25 init_data.xml
[2026-03-10 03:41:49] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:25 start_atlas.sh
[2026-03-10 03:41:49] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:25 shared
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:25 boinc_lockfile
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc      2562 Mar 10 02:25 pandaJob.out
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc   1002338 Mar 10 02:25 agis_schedconf.cvmfs.json
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc   1511578 Mar 10 02:25 agis_ddmendpoints.agis.ALL.json
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc       444 Mar 10 02:25 workernode_map.json
[2026-03-10 03:41:49] drwx------. 5 boinc boinc      4096 Mar 10 02:25 pilot3
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc 187234509 Mar 10 03:40 HITS.48955010._020559.pool.root.1
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc      1032 Mar 10 03:40 memory_monitor_summary.json
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc    264078 Mar 10 03:40 log.48955010._020559.job.log.tgz.1
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc      6353 Mar 10 03:40 heartbeat.json
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc       530 Mar 10 03:40 boinc_task_state.xml
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc      8192 Mar 10 03:41 boinc_mmap_file
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc        27 Mar 10 03:41 wrapper_checkpoint.txt
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc        95 Mar 10 03:41 pilot_heartbeat.json
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc      5433 Mar 10 03:41 pilotlog.txt
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc    669721 Mar 10 03:41 log.48955010._020559.job.log.1
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc       357 Mar 10 03:41 output.list
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc       620 Mar 10 03:41 runtime_log
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc    952320 Mar 10 03:41 result.tar.gz
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc      9204 Mar 10 03:41 runtime_log.err
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc       663 Mar 10 03:41 52KNDmpZvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmC2aLDm5saiVo.diag
[2026-03-10 03:41:49] -rw-r--r--. 1 boinc boinc     21598 Mar 10 03:41 stderr.txt
[2026-03-10 03:41:49] HITS file was successfully produced:
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc 187234509 Mar 10 03:40 shared/HITS.pool.root.1
[2026-03-10 03:41:49]  *** Contents of shared directory: ***
[2026-03-10 03:41:49] total 620636
[2026-03-10 03:41:49] -rw-r--r--. 2 boinc boinc 446717345 Mar 10 02:25 ATLAS.root_0
[2026-03-10 03:41:49] -rw-r--r--. 2 boinc boinc    597955 Mar 10 02:25 input.tar.gz
[2026-03-10 03:41:49] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:25 start_atlas.sh
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc 187234509 Mar 10 03:40 HITS.pool.root.1
[2026-03-10 03:41:49] -rw-------. 1 boinc boinc    952320 Mar 10 03:41 result.tar.gz
03:41:51 (1861047): run_atlas exited; CPU time 17461.001005
03:41:51 (1861047): called boinc_finish(0)

</stderr_txt>
]]>

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