Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
06:01:23 (3028037): wrapper (7.7.26015): starting
06:01:23 (3028037): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 06:01:23] Arguments: --nthreads 4
[2026-03-15 06:01:23] Threads: 4
[2026-03-15 06:01:23] Checking for CVMFS
[2026-03-15 06:01:23] No cvmfs_config command found, will try listing directly
[2026-03-15 06:01:23] CVMFS is ok
[2026-03-15 06:01:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 06:01:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 06:01:23] Further information can be found at the LHC@home message board.
[2026-03-15 06:01:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 06:01:23] Checking for apptainer binary...
[2026-03-15 06:01:23] which: no apptainer in ((null))
[2026-03-15 06:01:23] apptainer is not installed, using version from CVMFS
[2026-03-15 06:01:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 06:01:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-15 06:01:23] apptainer works
[2026-03-15 06:01:23] Set ATHENA_PROC_NUMBER=4
[2026-03-15 06:01:23] Set ATHENA_CORE_NUMBER=4
[2026-03-15 06:01:23] Starting ATLAS job with PandaID=7041481664
[2026-03-15 06:01:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:34:40 (3102606): wrapper (7.7.26015): starting
02:34:40 (3102606): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 02:34:40] Arguments: --nthreads 4
[2026-03-18 02:34:40] Threads: 4
[2026-03-18 02:34:40] This job has been restarted, cleaning up previous attempt
[2026-03-18 02:34:40] Checking for CVMFS
[2026-03-18 02:34:40] No cvmfs_config command found, will try listing directly
[2026-03-18 02:34:40] CVMFS is ok
[2026-03-18 02:34:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 02:34:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 02:34:40] Further information can be found at the LHC@home message board.
[2026-03-18 02:34:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 02:34:40] Checking for apptainer binary...
[2026-03-18 02:34:40] which: no apptainer in ((null))
[2026-03-18 02:34:40] apptainer is not installed, using version from CVMFS
[2026-03-18 02:34:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 02:34:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-18 02:34:40] apptainer works
[2026-03-18 02:34:40] Set ATHENA_PROC_NUMBER=4
[2026-03-18 02:34:40] Set ATHENA_CORE_NUMBER=4
[2026-03-18 02:34:40] Starting ATLAS job with PandaID=7041481664
[2026-03-18 02:34:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 02:37:58] Job failed
[2026-03-18 02:37:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-18 02:37:58] ++ pwd
[2026-03-18 02:37:58] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 02:37:58] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 02:37:58] + mv ATLAS.root_0 EVNT.46701403._000737.pool.root.1
[2026-03-18 02:37:58] mv: 'ATLAS.root_0' and 'EVNT.46701403._000737.pool.root.1' are the same file
[2026-03-18 02:37:58] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-18 02:37:58] + umask 077
[2026-03-18 02:37:58] ++ date +%s
[2026-03-18 02:37:58] + ACCOUNTING_STARTTIME=1773797681
[2026-03-18 02:37:58] + echo 'Detecting resource accounting method available for the job.'
[2026-03-18 02:37:58] Detecting resource accounting method available for the job.
[2026-03-18 02:37:58] + JOB_ACCOUNTING=
[2026-03-18 02:37:58] + command -v arc-job-cgroup
[2026-03-18 02:37:58] + '[' -z '' ']'
[2026-03-18 02:37:58] + GNU_TIME=/usr/bin/time
[2026-03-18 02:37:58] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-18 02:37:58] Looking for /usr/bin/time tool for accounting measurements
[2026-03-18 02:37:58] + '[' '!' -z /usr/bin/time ']'
[2026-03-18 02:37:58] + /usr/bin/time --version
[2026-03-18 02:37:58] + echo 'GNU time found and will be used for job accounting.'
[2026-03-18 02:37:58] GNU time found and will be used for job accounting.
[2026-03-18 02:37:58] + JOB_ACCOUNTING=gnutime
[2026-03-18 02:37:58] + '[' -z gnutime ']'
[2026-03-18 02:37:58] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-18 02:37:58] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-18 02:37:58] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-03-10/BOINC_MCORE/7041481664.out
[2026-03-18 02:37:58] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-03-10/BOINC_MCORE/7041481664.out
[2026-03-18 02:37:58] + export PILOT_NOKILL=YES
[2026-03-18 02:37:58] + PILOT_NOKILL=YES
[2026-03-18 02:37:58] + export GRID_GLOBAL_JOBID=hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 02:37:58] + GRID_GLOBAL_JOBID=hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 02:37:58] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 02:37:58] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 02:37:58] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-18 02:37:58] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-18 02:37:58] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2026-03-18 02:37:58] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2026-03-18 02:37:58] ++ pwd
[2026-03-18 02:37:58] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot44/slots/10
[2026-03-18 02:37:58] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-18 02:37:58] ++ pwd
[2026-03-18 02:37:58] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot44/slots/10/log.48955006._036852.job.log.1
[2026-03-18 02:37:58] ++ pwd
[2026-03-18 02:37:58] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot44/slots/10/log.48955006._036852.job.log.1
[2026-03-18 02:37:58] ++ pwd
[2026-03-18 02:37:58] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot44/slots/10.diag
[2026-03-18 02:37:58] + '[' '!' -z '' ']'
[2026-03-18 02:37:58] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-18 02:37:58] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-18 02:37:58] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-18 02:37:58] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-18 02:37:58] + '[' '!' -z '' ']'
[2026-03-18 02:37:58] + '[' -z yes ']'
[2026-03-18 02:37:58] ++ pwd
[2026-03-18 02:37:58] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag
[2026-03-18 02:37:58] + runtimeenvironments=
[2026-03-18 02:37:58] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-18 02:37:58] + RTE_function_0 1
[2026-03-18 02:37:58] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 02:37:58] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 02:37:58] + export BOINC_APP=ATLAS
[2026-03-18 02:37:58] + BOINC_APP=ATLAS
[2026-03-18 02:37:58] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 02:37:58] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 02:37:58] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 02:37:58] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 02:37:58] + '[' -z 1 ']'
[2026-03-18 02:37:58] + '[' 1 == 1 ']'
[2026-03-18 02:37:58] + shift
[2026-03-18 02:37:58] + export SITE_NAME=BOINC
[2026-03-18 02:37:58] + SITE_NAME=BOINC
[2026-03-18 02:37:58] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 02:37:58] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 02:37:58] + '[' -e /var/lib/boinc/var/slot44/slots/10/init_data.xml ']'
[2026-03-18 02:37:58] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot44/slots/10/init_data.xml
[2026-03-18 02:37:58] + '[' 0 -ne 0 ']'
[2026-03-18 02:37:58] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-18 02:37:58] + '[' -f /etc/os-release ']'
[2026-03-18 02:37:58] +++ cat /etc/os-release
[2026-03-18 02:37:58] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-18 02:37:58] +++ NAME='CentOS Linux'
[2026-03-18 02:37:58] +++ VERSION='7 (Core)'
[2026-03-18 02:37:58] +++ ID=centos
[2026-03-18 02:37:58] +++ ID_LIKE='rhel fedora'
[2026-03-18 02:37:58] +++ VERSION_ID=7
[2026-03-18 02:37:58] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-18 02:37:58] +++ ANSI_COLOR='0;31'
[2026-03-18 02:37:58] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-18 02:37:58] +++ HOME_URL=https://www.centos.org/
[2026-03-18 02:37:58] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-18 02:37:58] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-18 02:37:58] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-18 02:37:58] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-18 02:37:58] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-18 02:37:58] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-18 02:37:58] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-18 02:37:58] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-18 02:37:58] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-18 02:37:58] + HOME=/var/lib/boinc/var/slot44/slots/10
[2026-03-18 02:37:58] + export HOME
[2026-03-18 02:37:58] + cd /var/lib/boinc/var/slot44/slots/10
[2026-03-18 02:37:58] + '[' '!' -z '' ']'
[2026-03-18 02:37:58] + '[' -z '' ']'
[2026-03-18 02:37:58] ++ /bin/hostname -f
[2026-03-18 02:37:58] + nodename=skurut22.grid.cesnet.cz
[2026-03-18 02:37:58] + echo nodename=skurut22.grid.cesnet.cz
[2026-03-18 02:37:58] + echo Processors=2
[2026-03-18 02:37:58] + echo Nodecount=1
[2026-03-18 02:37:58] + echo Benchmark=HEPSPEC:1.0
[2026-03-18 02:37:58] + executable=./runpilot2-wrapper.sh
[2026-03-18 02:37:58] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-18 02:37:58] ++ head -n 1
[2026-03-18 02:37:58] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-18 02:37:58] ++ tr -d '\0'
[2026-03-18 02:37:58] + line1='#!/bin/bash'
[2026-03-18 02:37:58] ++ echo '#!/bin/bash'
[2026-03-18 02:37:58] ++ sed -n 's/^#! *//p'
[2026-03-18 02:37:58] + shebang=/bin/bash
[2026-03-18 02:37:58] ++ echo /bin/bash
[2026-03-18 02:37:58] ++ awk '{print $1}'
[2026-03-18 02:37:58] + interpreter=/bin/bash
[2026-03-18 02:37:58] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-18 02:37:58] + '[' x/bin/bash = x ']'
[2026-03-18 02:37:58] + type /bin/bash
[2026-03-18 02:37:58] + '[' xgnutime = xgnutime ']'
[2026-03-18 02:37:58] + /usr/bin/time -o /var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-18 02:37:58] + RESULT=2
[2026-03-18 02:37:58] + sed -i -e /nodename=/d /var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag
[2026-03-18 02:37:58] ++ awk -F '>' '{print $2}'
[2026-03-18 02:37:58] ++ grep domain_name init_data.xml
[2026-03-18 02:37:58] ++ awk -F '<' '{print $1}'
[2026-03-18 02:37:58] ++ sed -e 's# #_#g'
[2026-03-18 02:37:58] + hostname=skurut22.grid.cesnet.cz
[2026-03-18 02:37:58] ++ grep user_name init_data.xml
[2026-03-18 02:37:58] ++ sed -e 's# #_#g'
[2026-03-18 02:37:58] ++ awk -F '<' '{print $1}'
[2026-03-18 02:37:58] ++ awk -F '>' '{print $2}'
[2026-03-18 02:37:58] + username=praguelcg2
[2026-03-18 02:37:58] + nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-18 02:37:58] + echo nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-18 02:37:58] + '[' -n 4 ']'
[2026-03-18 02:37:58] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag
[2026-03-18 02:37:58] + echo exitcode=2
[2026-03-18 02:37:58] + runtimeenvironments=
[2026-03-18 02:37:58] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-18 02:37:58] + RTE_function_0 2
[2026-03-18 02:37:58] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 02:37:58] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 02:37:58] + export BOINC_APP=ATLAS
[2026-03-18 02:37:58] + BOINC_APP=ATLAS
[2026-03-18 02:37:58] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 02:37:58] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 02:37:58] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 02:37:58] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 02:37:58] + '[' -z 2 ']'
[2026-03-18 02:37:58] + '[' 2 == 1 ']'
[2026-03-18 02:37:58] + '[' 0 -ne 0 ']'
[2026-03-18 02:37:58] + echo 'zip all output files'
[2026-03-18 02:37:58] + flist='*.diag '
[2026-03-18 02:37:58] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 02:37:58] + '[' -e ./heartbeat.json ']'
[2026-03-18 02:37:58] + flist='*.diag  ./heartbeat.json'
[2026-03-18 02:37:58] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 02:37:58] + '[' -e ./output.list ']'
[2026-03-18 02:37:58] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 02:37:58] + '[' -e ./log.48955006._036852.job.log.1 ']'
[2026-03-18 02:37:58] + flist='*.diag  ./heartbeat.json ./log.48955006._036852.job.log.1'
[2026-03-18 02:37:58] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 02:37:58] + '[' -e ./log.48955006._036852.job.log.1 ']'
[2026-03-18 02:37:58] + flist='*.diag  ./heartbeat.json ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1'
[2026-03-18 02:37:58] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 02:37:58] + '[' -e ./gmlog/ ']'
[2026-03-18 02:37:58] + '[' -f output.list ']'
[2026-03-18 02:37:58] + tar cvf result.tar.gz hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag ./heartbeat.json ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1
[2026-03-18 02:37:58] + '[' xgnutime = xcgroup ']'
[2026-03-18 02:37:58] + '[' -n '' ']'
[2026-03-18 02:37:58] + '[' -n '' ']'
[2026-03-18 02:37:58] ++ date +%s
[2026-03-18 02:37:58] + ACCOUNTING_ENDTIME=1773797878
[2026-03-18 02:37:58] ++ date -d '1970-01-01 UTC 1773797681 seconds' +%Y%m%d%H%M%SZ
[2026-03-18 02:37:58] + echo LRMSStartTime=20260318023441Z
[2026-03-18 02:37:58] ++ date -d '1970-01-01 UTC 1773797878 seconds' +%Y%m%d%H%M%SZ
[2026-03-18 02:37:58] + echo LRMSEndTime=20260318023758Z
[2026-03-18 02:37:58] + echo walltime=197
[2026-03-18 02:37:58] + echo exitcode=2
[2026-03-18 02:37:58] + exit 2
[2026-03-18 02:37:58] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-18 02:37:58] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-18 02:37:58] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-18 02:37:58] ./pilot3/pilot/util/realtimelogger.py
[2026-03-18 02:37:58] ./pilot3/pilot/util/loggingsupport.py
[2026-03-18 02:37:58] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-18 02:37:58] ./PanDA_Pilot-7041481664/PoolFileCatalog.xml
[2026-03-18 02:37:58] ./PanDA_Pilot-7041481664/log.EVNTtoHITS
[2026-03-18 02:37:58] ./PanDA_Pilot-7041481664/prmon.log
[2026-03-18 02:37:58] ./PanDA_Pilot-7041481664/pilotlog.txt
[2026-03-18 02:37:58] ./runtime_log.err
[2026-03-18 02:37:58] ./log.48955006._036852.job.log.1
[2026-03-18 02:37:58] ./pilotlog.txt
[2026-03-18 02:37:58] ./runtime_log
03:38:47 (3410763): wrapper (7.7.26015): starting
03:38:47 (3410763): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 03:38:47] Arguments: --nthreads 4
[2026-03-18 03:38:47] Threads: 4
[2026-03-18 03:38:47] This job has been restarted, cleaning up previous attempt
[2026-03-18 03:38:47] Checking for CVMFS
[2026-03-18 03:38:47] No cvmfs_config command found, will try listing directly
[2026-03-18 03:38:47] CVMFS is ok
[2026-03-18 03:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 03:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 03:38:47] Further information can be found at the LHC@home message board.
[2026-03-18 03:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 03:38:47] Checking for apptainer binary...
[2026-03-18 03:38:47] which: no apptainer in ((null))
[2026-03-18 03:38:47] apptainer is not installed, using version from CVMFS
[2026-03-18 03:38:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 03:38:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-18 03:38:47] apptainer works
[2026-03-18 03:38:47] Set ATHENA_PROC_NUMBER=4
[2026-03-18 03:38:47] Set ATHENA_CORE_NUMBER=4
[2026-03-18 03:38:48] Starting ATLAS job with PandaID=7041481664
[2026-03-18 03:38:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 03:42:13] Job failed
[2026-03-18 03:42:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-18 03:42:13] ++ pwd
[2026-03-18 03:42:13] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 03:42:13] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 03:42:13] + mv ATLAS.root_0 EVNT.46701403._000737.pool.root.1
[2026-03-18 03:42:13] mv: 'ATLAS.root_0' and 'EVNT.46701403._000737.pool.root.1' are the same file
[2026-03-18 03:42:13] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-18 03:42:13] + umask 077
[2026-03-18 03:42:13] ++ date +%s
[2026-03-18 03:42:13] + ACCOUNTING_STARTTIME=1773801528
[2026-03-18 03:42:13] + echo 'Detecting resource accounting method available for the job.'
[2026-03-18 03:42:13] Detecting resource accounting method available for the job.
[2026-03-18 03:42:13] + JOB_ACCOUNTING=
[2026-03-18 03:42:13] + command -v arc-job-cgroup
[2026-03-18 03:42:13] + '[' -z '' ']'
[2026-03-18 03:42:13] + GNU_TIME=/usr/bin/time
[2026-03-18 03:42:13] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-18 03:42:13] Looking for /usr/bin/time tool for accounting measurements
[2026-03-18 03:42:13] + '[' '!' -z /usr/bin/time ']'
[2026-03-18 03:42:13] + /usr/bin/time --version
[2026-03-18 03:42:13] + echo 'GNU time found and will be used for job accounting.'
[2026-03-18 03:42:13] GNU time found and will be used for job accounting.
[2026-03-18 03:42:13] + JOB_ACCOUNTING=gnutime
[2026-03-18 03:42:13] + '[' -z gnutime ']'
[2026-03-18 03:42:13] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-18 03:42:13] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-18 03:42:13] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-03-10/BOINC_MCORE/7041481664.out
[2026-03-18 03:42:13] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-03-10/BOINC_MCORE/7041481664.out
[2026-03-18 03:42:13] + export PILOT_NOKILL=YES
[2026-03-18 03:42:13] + PILOT_NOKILL=YES
[2026-03-18 03:42:13] + export GRID_GLOBAL_JOBID=hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 03:42:13] + GRID_GLOBAL_JOBID=hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 03:42:13] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 03:42:13] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm
[2026-03-18 03:42:13] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-18 03:42:13] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-18 03:42:13] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2026-03-18 03:42:13] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2026-03-18 03:42:13] ++ pwd
[2026-03-18 03:42:13] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot44/slots/10
[2026-03-18 03:42:13] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-18 03:42:13] ++ pwd
[2026-03-18 03:42:13] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot44/slots/10/log.48955006._036852.job.log.1
[2026-03-18 03:42:13] ++ pwd
[2026-03-18 03:42:13] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot44/slots/10/log.48955006._036852.job.log.1
[2026-03-18 03:42:13] ++ pwd
[2026-03-18 03:42:13] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot44/slots/10.diag
[2026-03-18 03:42:13] + '[' '!' -z '' ']'
[2026-03-18 03:42:13] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-18 03:42:13] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-18 03:42:13] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-18 03:42:13] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-18 03:42:13] + '[' '!' -z '' ']'
[2026-03-18 03:42:13] + '[' -z yes ']'
[2026-03-18 03:42:13] ++ pwd
[2026-03-18 03:42:13] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag
[2026-03-18 03:42:13] + runtimeenvironments=
[2026-03-18 03:42:13] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-18 03:42:13] + RTE_function_0 1
[2026-03-18 03:42:13] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 03:42:13] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 03:42:13] + export BOINC_APP=ATLAS
[2026-03-18 03:42:13] + BOINC_APP=ATLAS
[2026-03-18 03:42:13] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 03:42:13] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 03:42:13] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 03:42:13] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 03:42:13] + '[' -z 1 ']'
[2026-03-18 03:42:13] + '[' 1 == 1 ']'
[2026-03-18 03:42:13] + shift
[2026-03-18 03:42:13] + export SITE_NAME=BOINC
[2026-03-18 03:42:13] + SITE_NAME=BOINC
[2026-03-18 03:42:13] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 03:42:13] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot44/slots/10/
[2026-03-18 03:42:13] + '[' -e /var/lib/boinc/var/slot44/slots/10/init_data.xml ']'
[2026-03-18 03:42:13] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot44/slots/10/init_data.xml
[2026-03-18 03:42:13] + '[' 0 -ne 0 ']'
[2026-03-18 03:42:13] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-18 03:42:13] + '[' -f /etc/os-release ']'
[2026-03-18 03:42:13] +++ cat /etc/os-release
[2026-03-18 03:42:13] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-18 03:42:13] +++ NAME='CentOS Linux'
[2026-03-18 03:42:13] +++ VERSION='7 (Core)'
[2026-03-18 03:42:13] +++ ID=centos
[2026-03-18 03:42:13] +++ ID_LIKE='rhel fedora'
[2026-03-18 03:42:13] +++ VERSION_ID=7
[2026-03-18 03:42:13] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-18 03:42:13] +++ ANSI_COLOR='0;31'
[2026-03-18 03:42:13] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-18 03:42:13] +++ HOME_URL=https://www.centos.org/
[2026-03-18 03:42:13] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-18 03:42:13] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-18 03:42:13] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-18 03:42:13] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-18 03:42:13] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-18 03:42:13] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-18 03:42:13] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-18 03:42:13] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-18 03:42:13] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-18 03:42:13] + HOME=/var/lib/boinc/var/slot44/slots/10
[2026-03-18 03:42:13] + export HOME
[2026-03-18 03:42:13] + cd /var/lib/boinc/var/slot44/slots/10
[2026-03-18 03:42:13] + '[' '!' -z '' ']'
[2026-03-18 03:42:13] + '[' -z '' ']'
[2026-03-18 03:42:13] ++ /bin/hostname -f
[2026-03-18 03:42:13] + nodename=skurut22.grid.cesnet.cz
[2026-03-18 03:42:13] + echo nodename=skurut22.grid.cesnet.cz
[2026-03-18 03:42:13] + echo Processors=2
[2026-03-18 03:42:13] + echo Nodecount=1
[2026-03-18 03:42:13] + echo Benchmark=HEPSPEC:1.0
[2026-03-18 03:42:13] + executable=./runpilot2-wrapper.sh
[2026-03-18 03:42:13] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-18 03:42:13] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-18 03:42:13] ++ tr -d '\0'
[2026-03-18 03:42:13] ++ head -n 1
[2026-03-18 03:42:13] + line1='#!/bin/bash'
[2026-03-18 03:42:13] ++ echo '#!/bin/bash'
[2026-03-18 03:42:13] ++ sed -n 's/^#! *//p'
[2026-03-18 03:42:13] + shebang=/bin/bash
[2026-03-18 03:42:13] ++ awk '{print $1}'
[2026-03-18 03:42:13] ++ echo /bin/bash
[2026-03-18 03:42:13] + interpreter=/bin/bash
[2026-03-18 03:42:13] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-18 03:42:13] + '[' x/bin/bash = x ']'
[2026-03-18 03:42:13] + type /bin/bash
[2026-03-18 03:42:13] + '[' xgnutime = xgnutime ']'
[2026-03-18 03:42:13] + /usr/bin/time -o /var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-18 03:42:13] + RESULT=2
[2026-03-18 03:42:13] + sed -i -e /nodename=/d /var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag
[2026-03-18 03:42:13] ++ grep domain_name init_data.xml
[2026-03-18 03:42:13] ++ sed -e 's# #_#g'
[2026-03-18 03:42:13] ++ awk -F '>' '{print $2}'
[2026-03-18 03:42:13] ++ awk -F '<' '{print $1}'
[2026-03-18 03:42:13] + hostname=skurut22.grid.cesnet.cz
[2026-03-18 03:42:13] ++ awk -F '>' '{print $2}'
[2026-03-18 03:42:13] ++ sed -e 's# #_#g'
[2026-03-18 03:42:13] ++ awk -F '<' '{print $1}'
[2026-03-18 03:42:13] ++ grep user_name init_data.xml
[2026-03-18 03:42:13] + username=praguelcg2
[2026-03-18 03:42:13] + nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-18 03:42:13] + echo nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-18 03:42:13] + '[' -n 4 ']'
[2026-03-18 03:42:13] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot44/slots/10/hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag
[2026-03-18 03:42:13] + echo exitcode=2
[2026-03-18 03:42:13] + runtimeenvironments=
[2026-03-18 03:42:13] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-18 03:42:13] + RTE_function_0 2
[2026-03-18 03:42:13] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 03:42:13] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-18 03:42:13] + export BOINC_APP=ATLAS
[2026-03-18 03:42:13] + BOINC_APP=ATLAS
[2026-03-18 03:42:13] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 03:42:13] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-18 03:42:13] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 03:42:13] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-18 03:42:13] + '[' -z 2 ']'
[2026-03-18 03:42:13] + '[' 2 == 1 ']'
[2026-03-18 03:42:13] + '[' 0 -ne 0 ']'
[2026-03-18 03:42:13] + echo 'zip all output files'
[2026-03-18 03:42:13] + flist='*.diag '
[2026-03-18 03:42:13] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 03:42:13] + '[' -e ./heartbeat.json ']'
[2026-03-18 03:42:13] + flist='*.diag  ./heartbeat.json'
[2026-03-18 03:42:13] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 03:42:13] + '[' -e ./output.list ']'
[2026-03-18 03:42:13] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 03:42:13] + '[' -e ./log.48955006._036852.job.log.1 ']'
[2026-03-18 03:42:13] + flist='*.diag  ./heartbeat.json ./log.48955006._036852.job.log.1'
[2026-03-18 03:42:13] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 03:42:13] + '[' -e ./log.48955006._036852.job.log.1 ']'
[2026-03-18 03:42:13] + flist='*.diag  ./heartbeat.json ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1'
[2026-03-18 03:42:13] + for f in ./heartbeat.json ./output.list ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1 ./gmlog/
[2026-03-18 03:42:13] + '[' -e ./gmlog/ ']'
[2026-03-18 03:42:13] + '[' -f output.list ']'
[2026-03-18 03:42:13] + tar cvf result.tar.gz hL5LDmkvzJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDeLDmXVzJTm.diag ./heartbeat.json ./log.48955006._036852.job.log.1 ./log.48955006._036852.job.log.1
[2026-03-18 03:42:13] + '[' xgnutime = xcgroup ']'
[2026-03-18 03:42:13] + '[' -n '' ']'
[2026-03-18 03:42:13] + '[' -n '' ']'
[2026-03-18 03:42:13] ++ date +%s
[2026-03-18 03:42:13] + ACCOUNTING_ENDTIME=1773801733
[2026-03-18 03:42:13] ++ date -d '1970-01-01 UTC 1773801528 seconds' +%Y%m%d%H%M%SZ
[2026-03-18 03:42:13] + echo LRMSStartTime=20260318033848Z
[2026-03-18 03:42:13] ++ date -d '1970-01-01 UTC 1773801733 seconds' +%Y%m%d%H%M%SZ
[2026-03-18 03:42:13] + echo LRMSEndTime=20260318034213Z
[2026-03-18 03:42:13] + echo walltime=205
[2026-03-18 03:42:13] + echo exitcode=2
[2026-03-18 03:42:13] + exit 2
[2026-03-18 03:42:13] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-18 03:42:13] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-18 03:42:13] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-18 03:42:13] ./pilot3/pilot/util/realtimelogger.py
[2026-03-18 03:42:13] ./pilot3/pilot/util/loggingsupport.py
[2026-03-18 03:42:13] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-18 03:42:13] ./PanDA_Pilot-7041481664/PoolFileCatalog.xml
[2026-03-18 03:42:13] ./PanDA_Pilot-7041481664/log.EVNTtoHITS
[2026-03-18 03:42:13] ./PanDA_Pilot-7041481664/prmon.log
[2026-03-18 03:42:13] ./PanDA_Pilot-7041481664/pilotlog.txt
[2026-03-18 03:42:13] ./runtime_log.err
[2026-03-18 03:42:13] ./log.48955006._036852.job.log.1
[2026-03-18 03:42:13] ./pilotlog.txt
[2026-03-18 03:42:13] ./runtime_log
03:52:14 (3410763): run_atlas exited; CPU time 14.228244
03:52:14 (3410763): app exit status: 0x1
03:52:14 (3410763): called boinc_finish(195)

</stderr_txt>
]]>

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