Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:28:00 (1423655): wrapper (7.7.26015): starting
16:28:00 (1423655): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 16:28:00] Arguments: --nthreads 4
[2026-03-14 16:28:00] Threads: 4
[2026-03-14 16:28:00] Checking for CVMFS
[2026-03-14 16:28:00] No cvmfs_config command found, will try listing directly
[2026-03-14 16:28:00] CVMFS is ok
[2026-03-14 16:28:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 16:28:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 16:28:00] Further information can be found at the LHC@home message board.
[2026-03-14 16:28:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:28:00] Checking for apptainer binary...
[2026-03-14 16:28:00] which: no apptainer in ((null))
[2026-03-14 16:28:00] apptainer is not installed, using version from CVMFS
[2026-03-14 16:28:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:28:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-14 16:28:02] apptainer works
[2026-03-14 16:28:02] Set ATHENA_PROC_NUMBER=4
[2026-03-14 16:28:02] Set ATHENA_CORE_NUMBER=4
[2026-03-14 16:28:02] Starting ATLAS job with PandaID=7041367882
[2026-03-14 16:28:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 20:51:00]  *** The last 200 lines of the pilot log: ***
[2026-03-14 20:51:00] 2026-03-14 19:49:52,437 | INFO     | mean y: 2317417.53125
[2026-03-14 20:51:00] 2026-03-14 19:49:52,437 | INFO     | intersect: 1760315568.4148233
[2026-03-14 20:51:00] 2026-03-14 19:49:52,437 | INFO     | chi2: 2.1747793925586585
[2026-03-14 20:51:00] 2026-03-14 19:49:52,438 | INFO     | sum of square deviations: 4903337380.995999
[2026-03-14 20:51:00] 2026-03-14 19:49:52,439 | INFO     | sum of deviations: 11013245889.474112
[2026-03-14 20:51:00] 2026-03-14 19:49:52,440 | INFO     | mean x: 1773509827.003984
[2026-03-14 20:51:00] 2026-03-14 19:49:52,440 | INFO     | mean y: 2325536.525896414
[2026-03-14 20:51:00] 2026-03-14 19:49:52,440 | INFO     | intersect: -3981104175.6319227
[2026-03-14 20:51:00] 2026-03-14 19:49:52,440 | INFO     | chi2: 1.3592312103112196
[2026-03-14 20:51:00] 2026-03-14 19:49:52,441 | INFO     | current chi2=1.3592312103112196 (change=37.50027175344599 %)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,441 | INFO     | sum of square deviations: 4616104393.49596
[2026-03-14 20:51:00] 2026-03-14 19:49:52,443 | INFO     | sum of deviations: 10707951025.056913
[2026-03-14 20:51:00] 2026-03-14 19:49:52,443 | INFO     | mean x: 1773509674.504065
[2026-03-14 20:51:00] 2026-03-14 19:49:52,443 | INFO     | mean y: 2325374.4430894307
[2026-03-14 20:51:00] 2026-03-14 19:49:52,443 | INFO     | intersect: -4111674898.993486
[2026-03-14 20:51:00] 2026-03-14 19:49:52,444 | INFO     | chi2: 1.3595765860135203
[2026-03-14 20:51:00] 2026-03-14 19:49:52,444 | INFO     | current chi2=1.3595765860135203 (change=-0.025409635953074047 %)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,444 | INFO     | right removable region: 245
[2026-03-14 20:51:00] 2026-03-14 19:49:52,444 | INFO     | sum of square deviations: 4903336770.995999
[2026-03-14 20:51:00] 2026-03-14 19:49:52,446 | INFO     | sum of deviations: -35981403837.163376
[2026-03-14 20:51:00] 2026-03-14 19:49:52,446 | INFO     | mean x: 1773510132.003984
[2026-03-14 20:51:00] 2026-03-14 19:49:52,446 | INFO     | mean y: 2332971.1633466138
[2026-03-14 20:51:00] 2026-03-14 19:49:52,447 | INFO     | intersect: 13016610237.69792
[2026-03-14 20:51:00] 2026-03-14 19:49:52,447 | INFO     | chi2: 0.8795521709617069
[2026-03-14 20:51:00] 2026-03-14 19:49:52,447 | INFO     | current chi2=0.8795521709617069 (change=59.55671761599224 %)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,447 | INFO     | sum of square deviations: 4616103173.49596
[2026-03-14 20:51:00] 2026-03-14 19:49:52,449 | INFO     | sum of deviations: -31190862062.292683
[2026-03-14 20:51:00] 2026-03-14 19:49:52,449 | INFO     | mean x: 1773510284.504065
[2026-03-14 20:51:00] 2026-03-14 19:49:52,449 | INFO     | mean y: 2330426.2926829266
[2026-03-14 20:51:00] 2026-03-14 19:49:52,450 | INFO     | intersect: 11985882910.049175
[2026-03-14 20:51:00] 2026-03-14 19:49:52,450 | INFO     | chi2: 0.8727612563559619
[2026-03-14 20:51:00] 2026-03-14 19:49:52,450 | INFO     | current chi2=0.8727612563559619 (change=0.7720877544216359 %)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,450 | INFO     | left removable region: 20
[2026-03-14 20:51:00] 2026-03-14 19:49:52,451 | INFO     | sum of square deviations: 3531961976.9955525
[2026-03-14 20:51:00] 2026-03-14 19:49:52,452 | INFO     | sum of deviations: -7250890810.111113
[2026-03-14 20:51:00] 2026-03-14 19:49:52,452 | INFO     | mean x: 1773510254.0044444
[2026-03-14 20:51:00] 2026-03-14 19:49:52,452 | INFO     | mean y: 2334567.111111111
[2026-03-14 20:51:00] 2026-03-14 19:49:52,453 | INFO     | intersect: 3643237070.069977
[2026-03-14 20:51:00] 2026-03-14 19:49:52,453 | INFO     | chi2: 0.024429133963766426
[2026-03-14 20:51:00] 2026-03-14 19:49:52,453 | INFO     | current memory leak: -2.05 B/s (using 225 data points, chi2=0.02)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,454 | INFO     | could have reported an average CPU frequency of 2573 MHz (12 samples)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,454 | INFO     | ..............................
[2026-03-14 20:51:00] 2026-03-14 19:49:52,454 | INFO     | . Timing measurements:
[2026-03-14 20:51:00] 2026-03-14 19:49:52,454 | INFO     | . get job = 0 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | . initial setup = 17 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | . payload setup = 17 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | . stage-in = 0 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | . payload execution = 15596 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | . stage-out = 1 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | . log creation = 0 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,455 | INFO     | ..............................
[2026-03-14 20:51:00] 2026-03-14 19:49:52,550 | INFO     | 
[2026-03-14 20:51:00] 2026-03-14 19:49:52,550 | INFO     | job summary report
[2026-03-14 20:51:00] 2026-03-14 19:49:52,550 | INFO     | --------------------------------------------------
[2026-03-14 20:51:00] 2026-03-14 19:49:52,550 | INFO     | PanDA job id: 7041367882
[2026-03-14 20:51:00] 2026-03-14 19:49:52,550 | INFO     | task id: 48955010
[2026-03-14 20:51:00] 2026-03-14 19:49:52,550 | INFO     | errors: (none)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | pilot state: finished 
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | transexitcode: 0
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | exeerrorcode: 0
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | exeerrordiag: 
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | exitcode: 0
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | exitmsg: OK
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | cpuconsumptiontime: 42147 s
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | nevents: 400
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | neventsw: 0
[2026-03-14 20:51:00] 2026-03-14 19:49:52,551 | INFO     | pid: 1433105
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | pgrp: 1433105
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | corecount: 4
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | event service: False
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | sizes: {0: 2279087, 1: 2280216, 2: 2280216, 15617: 2312126, 15618: 2321146, 15620: 2321202, 15622: 2321524}
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | --------------------------------------------------
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | 
[2026-03-14 20:51:00] 2026-03-14 19:49:52,552 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/6
[2026-03-14 20:51:00] 2026-03-14 19:49:52,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | job 7041367882 has completed (purged errors)
[2026-03-14 20:51:00] 2026-03-14 19:49:52,586 | INFO     | overall cleanup function is called
[2026-03-14 20:51:00] 2026-03-14 19:49:52,844 | WARNING  | process 1433105 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 20:51:00] 2026-03-14 19:49:53,140 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 20:51:00] 2026-03-14 19:49:53,141 | INFO     | using path: /var/lib/boinc/var/slot16/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 20:51:00] 2026-03-14 19:49:53,142 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 20:51:00] 2026-03-14 19:49:53,142 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 20:51:00] 2026-03-14 19:49:53,142 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7041367882/payload.stdout) since it has not been created yet
[2026-03-14 20:51:00] 2026-03-14 19:49:53,142 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/6
[2026-03-14 20:51:00] 2026-03-14 19:49:53,159 | INFO     | sufficient remaining disk space (20726153216 B)
[2026-03-14 20:51:00] 2026-03-14 19:49:53,159 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 20:51:00] 2026-03-14 19:49:53,160 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot16/slots/6/PanDA_Pilot-7041367882/HITS.48955010._021033.pool.root.1 since it does not exist
[2026-03-14 20:51:00] 2026-03-14 19:49:53,561 | INFO     | number of running child processes to parent process 1433105: 1
[2026-03-14 20:51:00] 2026-03-14 19:49:53,561 | INFO     | maximum number of monitored processes: 6
[2026-03-14 20:51:00] 2026-03-14 19:49:53,561 | INFO     | aborting job monitoring since job object (job id=7041367882) has expired
[2026-03-14 20:51:00] 2026-03-14 19:49:53,596 | INFO     | --- collectZombieJob: --- 10, [1433105]
[2026-03-14 20:51:00] 2026-03-14 19:49:53,596 | INFO     | zombie collector waiting for pid 1433105
[2026-03-14 20:51:00] 2026-03-14 19:49:53,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 20:51:00] 2026-03-14 19:49:53,596 | INFO     | collected zombie processes
[2026-03-14 20:51:00] 2026-03-14 19:49:53,596 | INFO     | will attempt to kill all subprocesses of pid=1433105
[2026-03-14 20:51:00] 2026-03-14 19:49:54,006 | INFO     | process IDs to be killed: [1433105] (in reverse order)
[2026-03-14 20:51:00] 2026-03-14 19:49:54,139 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 20:51:00] 2026-03-14 19:49:54,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 20:51:00] 2026-03-14 19:49:54,153 | INFO     | did not find any defunct processes belonging to 1433105
[2026-03-14 20:51:00] 2026-03-14 19:49:54,165 | INFO     | did not find any defunct processes belonging to 1433105
[2026-03-14 20:51:00] 2026-03-14 19:49:54,165 | INFO     | ready for new job
[2026-03-14 20:51:00] 2026-03-14 19:49:54,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 20:51:00] 2026-03-14 19:49:54,168 | INFO     | **************************************
[2026-03-14 20:51:00] 2026-03-14 19:49:54,168 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 20:51:00] 2026-03-14 19:49:54,168 | INFO     | **************************************
[2026-03-14 20:51:00] 2026-03-14 19:49:54,168 | INFO     | 
[2026-03-14 20:51:00] 2026-03-14 19:49:54,172 | INFO     | architecture information:
[2026-03-14 20:51:00] 2026-03-14 19:49:54,172 | INFO     | executing command: cat /etc/os-release
[2026-03-14 20:51:00] 2026-03-14 19:49:54,192 | INFO     | cat /etc/os-release:
[2026-03-14 20:51:00] NAME="CentOS Linux"
[2026-03-14 20:51:00] VERSION="7 (Core)"
[2026-03-14 20:51:00] ID="centos"
[2026-03-14 20:51:00] ID_LIKE="rhel fedora"
[2026-03-14 20:51:00] VERSION_ID="7"
[2026-03-14 20:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 20:51:00] ANSI_COLOR="0;31"
[2026-03-14 20:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 20:51:00] HOME_URL="https://www.centos.org/"
[2026-03-14 20:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 20:51:00] 
[2026-03-14 20:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 20:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 20:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 20:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 20:51:00] 
[2026-03-14 20:51:00] 2026-03-14 19:49:54,193 | INFO     | **************************************
[2026-03-14 20:51:00] 2026-03-14 19:49:54,695 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/6
[2026-03-14 20:51:00] 2026-03-14 19:49:54,711 | INFO     | sufficient remaining disk space (20728250368 B)
[2026-03-14 20:51:00] 2026-03-14 19:49:54,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 20:51:00] 2026-03-14 19:49:54,712 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 20:51:00] 2026-03-14 19:49:54,712 | INFO     | update_server=False
[2026-03-14 20:51:00] 2026-03-14 19:49:54,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 20:51:00] 2026-03-14 19:49:54,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 20:51:00] 2026-03-14 19:49:54,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:51:00] 2026-03-14 19:49:54,713 | INFO     | aborting loop
[2026-03-14 20:51:00] 2026-03-14 19:49:54,785 | INFO     | all data control threads have been joined
[2026-03-14 20:51:00] 2026-03-14 19:49:55,700 | INFO     | all payload control threads have been joined
[2026-03-14 20:51:00] 2026-03-14 19:49:55,717 | INFO     | [job] retrieve thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:55,718 | INFO     | [job] job monitor thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:55,769 | INFO     | all job control threads have been joined
[2026-03-14 20:51:00] 2026-03-14 19:49:55,790 | INFO     | [data] control thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:55,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 20:51:00] 2026-03-14 19:49:55,842 | INFO     | [job] validate thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:55,866 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,459 | INFO     | [payload] validate_post thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,672 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,705 | INFO     | [payload] control thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,718 | INFO     | [data] copytool_out thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,774 | INFO     | [job] control thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,854 | INFO     | [data] copytool_in thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:56,857 | INFO     | [payload] failed_post thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:57,093 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:57,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:51:00] 2026-03-14 19:49:58,567 | INFO     | [job] queue monitor thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:49:59,812 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:50:05,632 | INFO     | job.realtimelogging is not enabled
[2026-03-14 20:51:00] 2026-03-14 19:50:06,637 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 20:51:00] 2026-03-14 19:50:25,355 | INFO     | PID=1428242 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 20:51:00] 2026-03-14 19:50:25,355 | INFO     | .. there are 13 such processes running
[2026-03-14 20:51:00] 2026-03-14 19:50:25,355 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 20:51:00] 2026-03-14 19:50:25,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 20:51:00] 2026-03-14 19:50:25,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 20:51:00] 2026-03-14 19:50:54,497 | INFO     | [monitor] cgroup control has ended
[2026-03-14 20:51:00] 2026-03-14 19:50:55,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23222868092736)>', '<ExcThread(monitor, started 23222627346176)>']
[2026-03-14 20:51:00] 2026-03-14 19:50:55,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 20:51:00] 2026-03-14 19:50:55,510 | INFO     | [monitor] control thread has ended
[2026-03-14 20:51:00] 2026-03-14 19:51:00,407 | INFO     | all workflow threads have been joined
[2026-03-14 20:51:00] 2026-03-14 19:51:00,408 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 20:51:00] 2026-03-14 19:51:00,408 | INFO     | traces error code: 0
[2026-03-14 20:51:00] 2026-03-14 19:51:00,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 20:51:00] 2026-03-14 19:51:00,547 [wrapper] ==== pilot stdout END ====
[2026-03-14 20:51:00] 2026-03-14 19:51:00,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 20:51:00] 2026-03-14 19:51:00,553 [wrapper] pilotpid: 1428242
[2026-03-14 20:51:00] 2026-03-14 19:51:00,556 [wrapper] Pilot exit status: 0
[2026-03-14 20:51:00] 2026-03-14 19:51:00,592 [wrapper] pandaids: 7041367882
[2026-03-14 20:51:00] 2026-03-14 19:51:00,691 [wrapper] cleanup supervisor_pilot 1710190 1428243
[2026-03-14 20:51:00] 2026-03-14 19:51:00,694 [wrapper] Test setup, not cleaning
[2026-03-14 20:51:00] 2026-03-14 19:51:00,697 [wrapper] apfmon messages muted
[2026-03-14 20:51:00] 2026-03-14 19:51:00,699 [wrapper] ==== wrapper stdout END ====
[2026-03-14 20:51:00] 2026-03-14 19:51:00,702 [wrapper] ==== wrapper stderr END ====
[2026-03-14 20:51:00]  *** Error codes and diagnostics ***
[2026-03-14 20:51:00]     "exeErrorCode": 0,
[2026-03-14 20:51:00]     "exeErrorDiag": "",
[2026-03-14 20:51:00]     "pilotErrorCode": 0,
[2026-03-14 20:51:00]     "pilotErrorDiag": "",
[2026-03-14 20:51:00]  *** Listing of results directory ***
[2026-03-14 20:51:00] total 619996
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc    584627 Mar 10 00:46 pilot3.tar.gz
[2026-03-14 20:51:00] -rwx------. 1 boinc boinc     36322 Mar 10 00:46 runpilot2-wrapper.sh
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc      5111 Mar 10 00:46 queuedata.json
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc       100 Mar 14 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 20:51:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 15:27 run_atlas
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc       105 Mar 14 15:27 job.xml
[2026-03-14 20:51:00] -rw-r--r--. 2 boinc boinc 443253216 Mar 14 16:28 EVNT.46701403._001419.pool.root.1
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc      6562 Mar 14 16:28 init_data.xml
[2026-03-14 20:51:00] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:28 start_atlas.sh
[2026-03-14 20:51:00] drwxrwx--x. 2 boinc boinc      4096 Mar 14 16:28 shared
[2026-03-14 20:51:00] -rw-r--r--. 2 boinc boinc    597955 Mar 14 16:28 input.tar.gz
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:28 boinc_lockfile
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc      2562 Mar 14 16:28 pandaJob.out
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc   1004579 Mar 14 16:29 agis_schedconf.cvmfs.json
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc       446 Mar 14 16:29 workernode_map.json
[2026-03-14 20:51:00] drwx------. 5 boinc boinc      4096 Mar 14 16:29 pilot3
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc 182516300 Mar 14 20:49 HITS.48955010._021033.pool.root.1
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc       531 Mar 14 20:49 boinc_task_state.xml
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc      1033 Mar 14 20:49 memory_monitor_summary.json
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc        95 Mar 14 20:49 pilot_heartbeat.json
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc   1511579 Mar 14 20:49 agis_ddmendpoints.agis.ALL.json
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc    423505 Mar 14 20:49 log.48955010._021033.job.log.tgz.1
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc      6402 Mar 14 20:49 heartbeat.json
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc      8192 Mar 14 20:50 boinc_mmap_file
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc        28 Mar 14 20:50 wrapper_checkpoint.txt
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc      4901 Mar 14 20:51 pilotlog.txt
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc   2160244 Mar 14 20:51 log.48955010._021033.job.log.1
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc       357 Mar 14 20:51 output.list
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc       620 Mar 14 20:51 runtime_log
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc   2600960 Mar 14 20:51 result.tar.gz
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc      9205 Mar 14 20:51 runtime_log.err
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc       665 Mar 14 20:51 HYtKDmDUzJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLSbLDmxvyfzm.diag
[2026-03-14 20:51:00] -rw-r--r--. 1 boinc boinc     21342 Mar 14 20:51 stderr.txt
[2026-03-14 20:51:00] HITS file was successfully produced:
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc 182516300 Mar 14 20:49 shared/HITS.pool.root.1
[2026-03-14 20:51:00]  *** Contents of shared directory: ***
[2026-03-14 20:51:00] total 614256
[2026-03-14 20:51:00] -rw-r--r--. 2 boinc boinc 443253216 Mar 14 16:28 ATLAS.root_0
[2026-03-14 20:51:00] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:28 start_atlas.sh
[2026-03-14 20:51:00] -rw-r--r--. 2 boinc boinc    597955 Mar 14 16:28 input.tar.gz
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc 182516300 Mar 14 20:49 HITS.pool.root.1
[2026-03-14 20:51:00] -rw-------. 1 boinc boinc   2600960 Mar 14 20:51 result.tar.gz
20:51:02 (1423655): run_atlas exited; CPU time 42813.269911
20:51:02 (1423655): called boinc_finish(0)

</stderr_txt>
]]>

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