Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:27:38 (556311): wrapper (7.7.26015): starting
05:27:38 (556311): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 05:27:38] Arguments: --nthreads 4
[2026-03-10 05:27:38] Threads: 4
[2026-03-10 05:27:38] Checking for CVMFS
[2026-03-10 05:27:38] No cvmfs_config command found, will try listing directly
[2026-03-10 05:27:38] CVMFS is ok
[2026-03-10 05:27:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 05:27:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 05:27:38] Further information can be found at the LHC@home message board.
[2026-03-10 05:27:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 05:27:38] Checking for apptainer binary...
[2026-03-10 05:27:38] which: no apptainer in ((null))
[2026-03-10 05:27:38] apptainer is not installed, using version from CVMFS
[2026-03-10 05:27:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 05:27:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-10 05:27:38] apptainer works
[2026-03-10 05:27:38] Set ATHENA_PROC_NUMBER=4
[2026-03-10 05:27:38] Set ATHENA_CORE_NUMBER=4
[2026-03-10 05:27:38] Starting ATLAS job with PandaID=7041158608
[2026-03-10 05:27:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 10:00:16]  *** The last 200 lines of the pilot log: ***
[2026-03-10 10:00:16] 2026-03-10 08:59:38,991 | INFO     | extracted standard info from prmon json
[2026-03-10 10:00:16] 2026-03-10 08:59:38,991 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 10:00:16] 2026-03-10 08:59:38,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 10:00:16] 2026-03-10 08:59:38,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 10:00:16] 2026-03-10 08:59:38,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 10:00:16] 2026-03-10 08:59:39,003 | INFO     | fitting pss+swap vs Time
[2026-03-10 10:00:16] 2026-03-10 08:59:39,003 | INFO     | sum of square deviations: 5836011308.484994
[2026-03-10 10:00:16] 2026-03-10 08:59:39,006 | INFO     | sum of deviations: -10011438559.218052
[2026-03-10 10:00:16] 2026-03-10 08:59:39,006 | INFO     | mean x: 1773125071.5075188
[2026-03-10 10:00:16] 2026-03-10 08:59:39,007 | INFO     | mean y: 2323041.6090225563
[2026-03-10 10:00:16] 2026-03-10 08:59:39,007 | INFO     | intersect: 3044046536.1124744
[2026-03-10 10:00:16] 2026-03-10 08:59:39,007 | INFO     | chi2: 2.5725752302695444
[2026-03-10 10:00:16] 2026-03-10 08:59:39,008 | INFO     | sum of square deviations: 5513057025.98467
[2026-03-10 10:00:16] 2026-03-10 08:59:39,011 | INFO     | sum of deviations: 6723285693.988511
[2026-03-10 10:00:16] 2026-03-10 08:59:39,011 | INFO     | mean x: 1773124919.0076628
[2026-03-10 10:00:16] 2026-03-10 08:59:39,011 | INFO     | mean y: 2330823.5057471264
[2026-03-10 10:00:16] 2026-03-10 08:59:39,011 | INFO     | intersect: -2160031246.2915525
[2026-03-10 10:00:16] 2026-03-10 08:59:39,012 | INFO     | chi2: 1.775992914945231
[2026-03-10 10:00:16] 2026-03-10 08:59:39,012 | INFO     | current chi2=1.775992914945231 (change=30.964393419929287 %)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,012 | INFO     | sum of square deviations: 5202242505.984375
[2026-03-10 10:00:16] 2026-03-10 08:59:39,015 | INFO     | sum of deviations: 6456474395.875
[2026-03-10 10:00:16] 2026-03-10 08:59:39,023 | INFO     | mean x: 1773124766.5078125
[2026-03-10 10:00:16] 2026-03-10 08:59:39,023 | INFO     | mean y: 2330692.5625
[2026-03-10 10:00:16] 2026-03-10 08:59:39,023 | INFO     | intersect: -2198284646.395694
[2026-03-10 10:00:16] 2026-03-10 08:59:39,024 | INFO     | chi2: 1.7761518868013468
[2026-03-10 10:00:16] 2026-03-10 08:59:39,024 | INFO     | current chi2=1.7761518868013468 (change=-0.008951153733674135 %)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,024 | INFO     | right removable region: 255
[2026-03-10 10:00:16] 2026-03-10 08:59:39,025 | INFO     | sum of square deviations: 5513055805.98467
[2026-03-10 10:00:16] 2026-03-10 08:59:39,027 | INFO     | sum of deviations: -52617243751.2337
[2026-03-10 10:00:16] 2026-03-10 08:59:39,027 | INFO     | mean x: 1773125224.0076628
[2026-03-10 10:00:16] 2026-03-10 08:59:39,028 | INFO     | mean y: 2343013.6168582374
[2026-03-10 10:00:16] 2026-03-10 08:59:39,028 | INFO     | intersect: 16925255713.284075
[2026-03-10 10:00:16] 2026-03-10 08:59:39,028 | INFO     | chi2: 0.9620406250910828
[2026-03-10 10:00:16] 2026-03-10 08:59:39,029 | INFO     | current chi2=0.9620406250910828 (change=62.60398476314786 %)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,029 | INFO     | sum of square deviations: 5202240065.984375
[2026-03-10 10:00:16] 2026-03-10 08:59:39,032 | INFO     | sum of deviations: -46255834794.609375
[2026-03-10 10:00:16] 2026-03-10 08:59:39,032 | INFO     | mean x: 1773125376.5078125
[2026-03-10 10:00:16] 2026-03-10 08:59:39,032 | INFO     | mean y: 2339880.3046875
[2026-03-10 10:00:16] 2026-03-10 08:59:39,032 | INFO     | intersect: 15768124128.163206
[2026-03-10 10:00:16] 2026-03-10 08:59:39,033 | INFO     | chi2: 0.9480986993528625
[2026-03-10 10:00:16] 2026-03-10 08:59:39,033 | INFO     | current chi2=0.9480986993528625 (change=1.4492034301462384 %)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,033 | INFO     | left removable region: 20
[2026-03-10 10:00:16] 2026-03-10 08:59:39,033 | INFO     | sum of square deviations: 4024149260.995747
[2026-03-10 10:00:16] 2026-03-10 08:59:39,036 | INFO     | sum of deviations: -12068447593.936169
[2026-03-10 10:00:16] 2026-03-10 08:59:39,036 | INFO     | mean x: 1773125346.0042553
[2026-03-10 10:00:16] 2026-03-10 08:59:39,038 | INFO     | mean y: 2339008.936170213
[2026-03-10 10:00:16] 2026-03-10 08:59:39,039 | INFO     | intersect: 5319952478.978604
[2026-03-10 10:00:16] 2026-03-10 08:59:39,039 | INFO     | chi2: 0.05086638622085023
[2026-03-10 10:00:16] 2026-03-10 08:59:39,039 | INFO     | current memory leak: -3.00 B/s (using 235 data points, chi2=0.05)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,040 | INFO     | could have reported an average CPU frequency of 1995 MHz (12 samples)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,040 | INFO     | ..............................
[2026-03-10 10:00:16] 2026-03-10 08:59:39,040 | INFO     | . Timing measurements:
[2026-03-10 10:00:16] 2026-03-10 08:59:39,040 | INFO     | . get job = 0 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,040 | INFO     | . initial setup = 24 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,041 | INFO     | . payload setup = 26 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,041 | INFO     | . stage-in = 0 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,041 | INFO     | . payload execution = 16209 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,041 | INFO     | . stage-out = 1 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,041 | INFO     | . log creation = 0 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,041 | INFO     | ..............................
[2026-03-10 10:00:16] 2026-03-10 08:59:39,237 | INFO     | 
[2026-03-10 10:00:16] 2026-03-10 08:59:39,237 | INFO     | job summary report
[2026-03-10 10:00:16] 2026-03-10 08:59:39,237 | INFO     | --------------------------------------------------
[2026-03-10 10:00:16] 2026-03-10 08:59:39,237 | INFO     | PanDA job id: 7041158608
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | task id: 48955015
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | errors: (none)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | pilot state: finished 
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | transexitcode: 0
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | exeerrorcode: 0
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | exeerrordiag: 
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | exitcode: 0
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | exitmsg: OK
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | cpuconsumptiontime: 57990 s
[2026-03-10 10:00:16] 2026-03-10 08:59:39,238 | INFO     | nevents: 400
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | neventsw: 0
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | pid: 568526
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | pgrp: 568526
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | corecount: 4
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | event service: False
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | sizes: {0: 2279816, 1: 2280277, 12: 2280277, 16240: 2311656, 16243: 2320732, 16244: 2320870}
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | --------------------------------------------------
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | 
[2026-03-10 10:00:16] 2026-03-10 08:59:39,239 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/5
[2026-03-10 10:00:16] 2026-03-10 08:59:39,298 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,298 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,298 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,299 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 10:00:16] 2026-03-10 08:59:39,301 | INFO     | job 7041158608 has completed (purged errors)
[2026-03-10 10:00:16] 2026-03-10 08:59:39,301 | INFO     | overall cleanup function is called
[2026-03-10 10:00:16] 2026-03-10 08:59:39,348 | WARNING  | process 568526 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 10:00:16] 2026-03-10 08:59:40,129 | INFO     | using path: /var/lib/boinc/var/slot16/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 10:00:16] 2026-03-10 08:59:40,313 | INFO     | --- collectZombieJob: --- 10, [568526]
[2026-03-10 10:00:16] 2026-03-10 08:59:40,313 | INFO     | zombie collector waiting for pid 568526
[2026-03-10 10:00:16] 2026-03-10 08:59:40,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 10:00:16] 2026-03-10 08:59:40,314 | INFO     | collected zombie processes
[2026-03-10 10:00:16] 2026-03-10 08:59:40,314 | INFO     | will attempt to kill all subprocesses of pid=568526
[2026-03-10 10:00:16] 2026-03-10 08:59:42,375 | INFO     | number of running child processes to parent process 568526: 1
[2026-03-10 10:00:16] 2026-03-10 08:59:42,376 | INFO     | maximum number of monitored processes: 6
[2026-03-10 10:00:16] 2026-03-10 08:59:42,376 | INFO     | aborting job monitoring since job object (job id=7041158608) has expired
[2026-03-10 10:00:16] 2026-03-10 08:59:42,596 | INFO     | process IDs to be killed: [568526] (in reverse order)
[2026-03-10 10:00:16] 2026-03-10 08:59:43,109 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 10:00:16] 2026-03-10 08:59:43,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 10:00:16] 2026-03-10 08:59:43,147 | INFO     | did not find any defunct processes belonging to 568526
[2026-03-10 10:00:16] 2026-03-10 08:59:43,183 | INFO     | did not find any defunct processes belonging to 568526
[2026-03-10 10:00:16] 2026-03-10 08:59:43,184 | INFO     | ready for new job
[2026-03-10 10:00:16] 2026-03-10 08:59:43,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 10:00:16] 2026-03-10 08:59:43,187 | INFO     | **************************************
[2026-03-10 10:00:16] 2026-03-10 08:59:43,187 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 10:00:16] 2026-03-10 08:59:43,188 | INFO     | **************************************
[2026-03-10 10:00:16] 2026-03-10 08:59:43,188 | INFO     | 
[2026-03-10 10:00:16] 2026-03-10 08:59:43,199 | INFO     | architecture information:
[2026-03-10 10:00:16] 2026-03-10 08:59:43,199 | INFO     | executing command: cat /etc/os-release
[2026-03-10 10:00:16] 2026-03-10 08:59:43,238 | INFO     | cat /etc/os-release:
[2026-03-10 10:00:16] NAME="CentOS Linux"
[2026-03-10 10:00:16] VERSION="7 (Core)"
[2026-03-10 10:00:16] ID="centos"
[2026-03-10 10:00:16] ID_LIKE="rhel fedora"
[2026-03-10 10:00:16] VERSION_ID="7"
[2026-03-10 10:00:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 10:00:16] ANSI_COLOR="0;31"
[2026-03-10 10:00:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 10:00:16] HOME_URL="https://www.centos.org/"
[2026-03-10 10:00:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 10:00:16] 
[2026-03-10 10:00:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 10:00:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 10:00:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 10:00:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 10:00:16] 
[2026-03-10 10:00:16] 2026-03-10 08:59:43,238 | INFO     | **************************************
[2026-03-10 10:00:16] 2026-03-10 08:59:43,740 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/5
[2026-03-10 10:00:16] 2026-03-10 08:59:43,781 | INFO     | sufficient remaining disk space (157030547456 B)
[2026-03-10 10:00:16] 2026-03-10 08:59:43,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 10:00:16] 2026-03-10 08:59:43,782 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 10:00:16] 2026-03-10 08:59:43,782 | INFO     | update_server=False
[2026-03-10 10:00:16] 2026-03-10 08:59:43,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 10:00:16] 2026-03-10 08:59:43,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:00:16] 2026-03-10 08:59:43,783 | INFO     | aborting loop
[2026-03-10 10:00:16] 2026-03-10 08:59:43,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 10:00:16] 2026-03-10 08:59:44,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 10:00:16] 2026-03-10 08:59:44,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 10:00:16] 2026-03-10 08:59:44,272 | INFO     | all data control threads have been joined
[2026-03-10 10:00:16] 2026-03-10 08:59:44,275 | INFO     | all payload control threads have been joined
[2026-03-10 10:00:16] 2026-03-10 08:59:44,787 | INFO     | [job] retrieve thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:44,788 | INFO     | [job] job monitor thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:44,977 | INFO     | all job control threads have been joined
[2026-03-10 10:00:16] 2026-03-10 08:59:45,120 | INFO     | [payload] failed_post thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,200 | INFO     | [job] validate thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,252 | INFO     | [job] queue monitor thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,277 | INFO     | [data] control thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,280 | INFO     | [payload] control thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,428 | INFO     | [payload] validate_post thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,616 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,788 | INFO     | [data] copytool_out thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,859 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:45,982 | INFO     | [job] control thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:46,184 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:46,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:46,273 | INFO     | [data] copytool_in thread has finished
[2026-03-10 10:00:16] 2026-03-10 08:59:48,027 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 10:00:16] 2026-03-10 09:00:09,822 | INFO     | [monitor] cgroup control has ended
[2026-03-10 10:00:16] 2026-03-10 09:00:10,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22660175681344)>', '<ExcThread(monitor, started 22659923691264)>']
[2026-03-10 10:00:16] 2026-03-10 09:00:11,882 | INFO     | PID=562966 has CPU usage=18.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 10:00:16] 2026-03-10 09:00:11,882 | INFO     | .. there are 30 such processes running
[2026-03-10 10:00:16] 2026-03-10 09:00:11,883 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 10:00:16] 2026-03-10 09:00:11,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 10:00:16] 2026-03-10 09:00:11,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 10:00:16] 2026-03-10 09:00:11,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 10:00:16] 2026-03-10 09:00:11,884 | INFO     | [monitor] control thread has ended
[2026-03-10 10:00:16] 2026-03-10 09:00:15,511 | INFO     | all workflow threads have been joined
[2026-03-10 10:00:16] 2026-03-10 09:00:15,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 10:00:16] 2026-03-10 09:00:15,512 | INFO     | traces error code: 0
[2026-03-10 10:00:16] 2026-03-10 09:00:15,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 10:00:16] 2026-03-10 09:00:15,681 [wrapper] ==== pilot stdout END ====
[2026-03-10 10:00:16] 2026-03-10 09:00:15,687 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 10:00:16] 2026-03-10 09:00:15,691 [wrapper] pilotpid: 562966
[2026-03-10 10:00:16] 2026-03-10 09:00:15,695 [wrapper] Pilot exit status: 0
[2026-03-10 10:00:16] 2026-03-10 09:00:15,783 [wrapper] pandaids: 7041158608
[2026-03-10 10:00:16] 2026-03-10 09:00:16,022 [wrapper] cleanup supervisor_pilot 1125614 562967
[2026-03-10 10:00:16] 2026-03-10 09:00:16,028 [wrapper] Test setup, not cleaning
[2026-03-10 10:00:16] 2026-03-10 09:00:16,033 [wrapper] apfmon messages muted
[2026-03-10 10:00:16] 2026-03-10 09:00:16,039 [wrapper] ==== wrapper stdout END ====
[2026-03-10 10:00:16] 2026-03-10 09:00:16,044 [wrapper] ==== wrapper stderr END ====
[2026-03-10 10:00:16]  *** Error codes and diagnostics ***
[2026-03-10 10:00:16]     "exeErrorCode": 0,
[2026-03-10 10:00:16]     "exeErrorDiag": "",
[2026-03-10 10:00:16]     "pilotErrorCode": 0,
[2026-03-10 10:00:16]     "pilotErrorDiag": "",
[2026-03-10 10:00:16]  *** Listing of results directory ***
[2026-03-10 10:00:16] total 626016
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc    584627 Mar  9 20:08 pilot3.tar.gz
[2026-03-10 10:00:16] -rwx------. 1 boinc boinc     36322 Mar  9 20:09 runpilot2-wrapper.sh
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc      5111 Mar  9 20:10 queuedata.json
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc       100 Mar 10 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 10:00:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 05:27 run_atlas
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc       105 Mar 10 05:27 job.xml
[2026-03-10 10:00:16] -rw-r--r--. 2 boinc boinc 443646081 Mar 10 05:27 EVNT.46701403._002256.pool.root.1
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc      6687 Mar 10 05:27 init_data.xml
[2026-03-10 10:00:16] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:27 start_atlas.sh
[2026-03-10 10:00:16] drwxrwx--x. 2 boinc boinc      4096 Mar 10 05:27 shared
[2026-03-10 10:00:16] -rw-r--r--. 2 boinc boinc    597963 Mar 10 05:27 input.tar.gz
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc         0 Mar 10 05:27 boinc_lockfile
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc      2572 Mar 10 05:27 pandaJob.out
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc   1006495 Mar 10 05:28 agis_schedconf.cvmfs.json
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc       440 Mar 10 05:28 workernode_map.json
[2026-03-10 10:00:16] drwx------. 5 boinc boinc      4096 Mar 10 05:28 pilot3
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc 188429371 Mar 10 09:58 HITS.48955015._010198.pool.root.1
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc       532 Mar 10 09:59 boinc_task_state.xml
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc      1028 Mar 10 09:59 memory_monitor_summary.json
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc   1511578 Mar 10 09:59 agis_ddmendpoints.agis.ALL.json
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc    443888 Mar 10 09:59 log.48955015._010198.job.log.tgz.1
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc      6358 Mar 10 09:59 heartbeat.json
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc        28 Mar 10 10:00 wrapper_checkpoint.txt
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc      8192 Mar 10 10:00 boinc_mmap_file
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc        95 Mar 10 10:00 pilot_heartbeat.json
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc      4830 Mar 10 10:00 pilotlog.txt
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc   2066633 Mar 10 10:00 log.48955015._010198.job.log.1
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc       357 Mar 10 10:00 output.list
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc       620 Mar 10 10:00 runtime_log
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc   2529280 Mar 10 10:00 result.tar.gz
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc      9205 Mar 10 10:00 runtime_log.err
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc       666 Mar 10 10:00 4QcKDmGAvJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmusaLDmE8Yljn.diag
[2026-03-10 10:00:16] -rw-r--r--. 1 boinc boinc     20908 Mar 10 10:00 stderr.txt
[2026-03-10 10:00:16] HITS file was successfully produced:
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc 188429371 Mar 10 09:58 shared/HITS.pool.root.1
[2026-03-10 10:00:16]  *** Contents of shared directory: ***
[2026-03-10 10:00:16] total 620348
[2026-03-10 10:00:16] -rw-r--r--. 2 boinc boinc 443646081 Mar 10 05:27 ATLAS.root_0
[2026-03-10 10:00:16] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:27 start_atlas.sh
[2026-03-10 10:00:16] -rw-r--r--. 2 boinc boinc    597963 Mar 10 05:27 input.tar.gz
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc 188429371 Mar 10 09:58 HITS.pool.root.1
[2026-03-10 10:00:16] -rw-------. 1 boinc boinc   2529280 Mar 10 10:00 result.tar.gz
10:00:18 (556311): run_atlas exited; CPU time 59534.138753
10:00:18 (556311): called boinc_finish(0)

</stderr_txt>
]]>

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