Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:33:17 (3323872): wrapper (7.7.26015): starting
10:33:17 (3323872): wrapper: running run_atlas (--nthreads 3)
[2026-03-10 10:33:17] Arguments: --nthreads 3
[2026-03-10 10:33:17] Threads: 3
[2026-03-10 10:33:17] Checking for CVMFS
[2026-03-10 10:33:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 10:33:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 10:33:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 10:33:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 10:33:18] 2.9.2.0 964071 18383 74840 157109 0 49 27348571 36864000 0 130560 0 6546937 99.980 687662 9783 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 10:33:18] CVMFS is ok
[2026-03-10 10:33:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 10:33:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 10:33:18] Further information can be found at the LHC@home message board.
[2026-03-10 10:33:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 10:33:18] Checking for apptainer binary...
[2026-03-10 10:33:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 10:33:18] Running /usr/bin/apptainer --version
[2026-03-10 10:33:18] apptainer version 1.3.6-6.1
[2026-03-10 10:33:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 10:33:18] atlasA226
[2026-03-10 10:33:18] apptainer works
[2026-03-10 10:33:18] Set ATHENA_PROC_NUMBER=3
[2026-03-10 10:33:18] Set ATHENA_CORE_NUMBER=3
[2026-03-10 10:33:18] Starting ATLAS job with PandaID=7047420012
[2026-03-10 10:33:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 12:21:46]  *** The last 200 lines of the pilot log: ***
[2026-03-10 12:21:46] 2026-03-10 11:20:58,377 | INFO     | extracted standard info from prmon json
[2026-03-10 12:21:46] 2026-03-10 11:20:58,377 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 12:21:46] 2026-03-10 11:20:58,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 12:21:46] 2026-03-10 11:20:58,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 12:21:46] 2026-03-10 11:20:58,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 12:21:46] 2026-03-10 11:20:58,378 | INFO     | fitting pss+swap vs Time
[2026-03-10 12:21:46] 2026-03-10 11:20:58,378 | INFO     | sum of square deviations: 369281342.5
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | sum of deviations: -12239794539.5
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | mean x: 1773138434.5
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | mean y: 2373068.3113207547
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | intersect: 58772875746.41691
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | chi2: 2.472254920816561
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | sum of square deviations: 319447850.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | sum of deviations: -4428641541.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | mean x: 1773138282.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | mean y: 2396174.702970297
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | intersect: 24584167044.66679
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | chi2: 1.6267139524911578
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | current chi2=1.6267139524911578 (change=34.20120478700998 %)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | sum of square deviations: 274312120.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,379 | INFO     | sum of deviations: -3551068304.5
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | mean x: 1773138129.5
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | mean y: 2399142.8854166665
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | intersect: 22956305121.111485
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | chi2: 1.6286152108122018
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | current chi2=1.6286152108122018 (change=-0.11687723696796508 %)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | right removable region: 95
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | sum of square deviations: 319447850.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | sum of deviations: -26022545222.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | mean x: 1773138587.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | mean y: 2414121.8118811883
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | intersect: 144444078277.8883
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | chi2: 0.9992042278126645
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | current chi2=0.9992042278126645 (change=59.583284903215514 %)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | sum of square deviations: 274312120.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | sum of deviations: -21561446008.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | mean x: 1773138739.5
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | mean y: 2399024.1666666665
[2026-03-10 12:21:46] 2026-03-10 11:20:58,380 | INFO     | intersect: 139374422383.62457
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | chi2: 0.9921832279673364
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | current chi2=0.9921832279673364 (change=0.7026591411345032 %)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | left removable region: 20
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | sum of square deviations: 130793150.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | sum of deviations: -7331796729.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | mean x: 1773138709.0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | mean y: 2405577.1466666665
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | intersect: 99398227045.69821
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | chi2: 0.06875239934351814
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | current memory leak: -56.06 B/s (using 75 data points, chi2=0.07)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | could have reported an average CPU frequency of 4371 MHz (7 samples)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | ..............................
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . Timing measurements:
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . get job = 0 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . initial setup = 5 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . payload setup = 6 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . stage-in = 0 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . payload execution = 6423 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . stage-out = 0 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | . log creation = 0 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,381 | INFO     | ..............................
[2026-03-10 12:21:46] 2026-03-10 11:20:58,774 | INFO     | 
[2026-03-10 12:21:46] 2026-03-10 11:20:58,775 | INFO     | job summary report
[2026-03-10 12:21:46] 2026-03-10 11:20:58,775 | INFO     | --------------------------------------------------
[2026-03-10 12:21:46] 2026-03-10 11:20:58,776 | INFO     | PanDA job id: 7047420012
[2026-03-10 12:21:46] 2026-03-10 11:20:58,776 | INFO     | task id: 48966988
[2026-03-10 12:21:46] 2026-03-10 11:20:58,776 | INFO     | errors: (none)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,776 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 12:21:46] 2026-03-10 11:20:58,776 | INFO     | pilot state: finished 
[2026-03-10 12:21:46] 2026-03-10 11:20:58,776 | INFO     | transexitcode: 0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | exeerrorcode: 0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | exeerrordiag: 
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | exitcode: 0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | exitmsg: OK
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | cpuconsumptiontime: 18511 s
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | nevents: 400
[2026-03-10 12:21:46] 2026-03-10 11:20:58,777 | INFO     | neventsw: 0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | pid: 3332400
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | pgrp: 3332400
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | corecount: 3
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | event service: False
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | sizes: {0: 2280274, 11: 2280274, 6432: 2316424, 6434: 2316424, 6435: 2316618}
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | --------------------------------------------------
[2026-03-10 12:21:46] 2026-03-10 11:20:58,778 | INFO     | 
[2026-03-10 12:21:46] 2026-03-10 11:20:58,779 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-10 12:21:46] 2026-03-10 11:20:58,830 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,830 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,833 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 12:21:46] 2026-03-10 11:20:58,834 | INFO     | job 7047420012 has completed (purged errors)
[2026-03-10 12:21:46] 2026-03-10 11:20:58,834 | INFO     | overall cleanup function is called
[2026-03-10 12:21:46] 2026-03-10 11:20:59,843 | INFO     | --- collectZombieJob: --- 10, [3332400]
[2026-03-10 12:21:46] 2026-03-10 11:20:59,843 | INFO     | zombie collector waiting for pid 3332400
[2026-03-10 12:21:46] 2026-03-10 11:20:59,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 12:21:46] 2026-03-10 11:20:59,844 | INFO     | collected zombie processes
[2026-03-10 12:21:46] 2026-03-10 11:20:59,844 | INFO     | will attempt to kill all subprocesses of pid=3332400
[2026-03-10 12:21:46] 2026-03-10 11:20:59,887 | INFO     | process IDs to be killed: [3332400] (in reverse order)
[2026-03-10 12:21:46] 2026-03-10 11:20:59,914 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 12:21:46] 2026-03-10 11:20:59,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 12:21:46] 2026-03-10 11:20:59,916 | INFO     | did not find any defunct processes belonging to 3332400
[2026-03-10 12:21:46] 2026-03-10 11:20:59,917 | INFO     | did not find any defunct processes belonging to 3332400
[2026-03-10 12:21:46] 2026-03-10 11:20:59,917 | INFO     | ready for new job
[2026-03-10 12:21:46] 2026-03-10 11:20:59,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 12:21:46] 2026-03-10 11:20:59,918 | INFO     | **************************************
[2026-03-10 12:21:46] 2026-03-10 11:20:59,918 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 12:21:46] 2026-03-10 11:20:59,918 | INFO     | **************************************
[2026-03-10 12:21:46] 2026-03-10 11:20:59,918 | INFO     | 
[2026-03-10 12:21:46] 2026-03-10 11:20:59,918 | INFO     | architecture information:
[2026-03-10 12:21:46] 2026-03-10 11:20:59,918 | INFO     | executing command: cat /etc/os-release
[2026-03-10 12:21:46] 2026-03-10 11:20:59,929 | INFO     | cat /etc/os-release:
[2026-03-10 12:21:46] NAME="CentOS Linux"
[2026-03-10 12:21:46] VERSION="7 (Core)"
[2026-03-10 12:21:46] ID="centos"
[2026-03-10 12:21:46] ID_LIKE="rhel fedora"
[2026-03-10 12:21:46] VERSION_ID="7"
[2026-03-10 12:21:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 12:21:46] ANSI_COLOR="0;31"
[2026-03-10 12:21:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 12:21:46] HOME_URL="https://www.centos.org/"
[2026-03-10 12:21:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 12:21:46] 
[2026-03-10 12:21:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 12:21:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 12:21:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 12:21:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 12:21:46] 
[2026-03-10 12:21:46] 2026-03-10 11:20:59,929 | INFO     | **************************************
[2026-03-10 12:21:46] 2026-03-10 11:21:00,433 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-10 12:21:46] 2026-03-10 11:21:00,446 | INFO     | sufficient remaining disk space (327239598080 B)
[2026-03-10 12:21:46] 2026-03-10 11:21:00,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 12:21:46] 2026-03-10 11:21:00,447 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 12:21:46] 2026-03-10 11:21:00,447 | INFO     | update_server=False
[2026-03-10 12:21:46] 2026-03-10 11:21:00,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 12:21:46] 2026-03-10 11:21:00,781 | INFO     | all job control threads have been joined
[2026-03-10 12:21:46] 2026-03-10 11:21:00,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 12:21:46] 2026-03-10 11:21:01,110 | INFO     | all payload control threads have been joined
[2026-03-10 12:21:46] 2026-03-10 11:21:01,433 | INFO     | all data control threads have been joined
[2026-03-10 12:21:46] 2026-03-10 11:21:01,453 | INFO     | [job] retrieve thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:01,511 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:01,565 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:01,787 | INFO     | [job] control thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:01,850 | INFO     | [data] copytool_in thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:01,913 | WARNING  | process 3332400 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 12:21:46] 2026-03-10 11:21:01,945 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 12:21:46] 2026-03-10 11:21:01,984 | INFO     | number of running child processes to parent process 3332400: 1
[2026-03-10 12:21:46] 2026-03-10 11:21:01,984 | INFO     | maximum number of monitored processes: 6
[2026-03-10 12:21:46] 2026-03-10 11:21:01,984 | INFO     | aborting job monitoring since job object (job id=7047420012) has expired
[2026-03-10 12:21:46] 2026-03-10 11:21:01,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:21:46] 2026-03-10 11:21:01,984 | INFO     | will abort loop
[2026-03-10 12:21:46] 2026-03-10 11:21:02,106 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:02,116 | INFO     | [payload] control thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:02,439 | INFO     | [data] control thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:02,533 | INFO     | [payload] validate_post thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:02,708 | INFO     | [job] validate thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:02,964 | INFO     | [data] copytool_out thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:02,990 | INFO     | [job] job monitor thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:03,033 | INFO     | [payload] failed_post thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:03,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 12:21:46] 2026-03-10 11:21:03,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:21:46] 2026-03-10 11:21:04,427 | INFO     | [job] queue monitor thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:07,199 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:11,242 | INFO     | job.realtimelogging is not enabled
[2026-03-10 12:21:46] 2026-03-10 11:21:12,248 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 12:21:46] 2026-03-10 11:21:30,663 | INFO     | PID=3327959 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 12:21:46] 2026-03-10 11:21:30,663 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 12:21:46] 2026-03-10 11:21:30,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 12:21:46] 2026-03-10 11:21:30,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 12:21:46] 2026-03-10 11:21:40,925 | INFO     | [monitor] cgroup control has ended
[2026-03-10 12:21:46] 2026-03-10 11:21:41,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438222378816)>', '<ExcThread(monitor, started 140437352335104)>']
[2026-03-10 12:21:46] 2026-03-10 11:21:41,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 12:21:46] 2026-03-10 11:21:41,723 | INFO     | [monitor] control thread has ended
[2026-03-10 12:21:46] 2026-03-10 11:21:46,347 | INFO     | all workflow threads have been joined
[2026-03-10 12:21:46] 2026-03-10 11:21:46,347 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 12:21:46] 2026-03-10 11:21:46,347 | INFO     | traces error code: 0
[2026-03-10 12:21:46] 2026-03-10 11:21:46,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 12:21:46] 2026-03-10 11:21:46,401 [wrapper] ==== pilot stdout END ====
[2026-03-10 12:21:46] 2026-03-10 11:21:46,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 12:21:46] 2026-03-10 11:21:46,410 [wrapper] pilotpid: 3327959
[2026-03-10 12:21:46] 2026-03-10 11:21:46,412 [wrapper] Pilot exit status: 0
[2026-03-10 12:21:46] 2026-03-10 11:21:46,419 [wrapper] pandaids: 7047420012
[2026-03-10 12:21:46] 2026-03-10 11:21:46,435 [wrapper] cleanup supervisor_pilot 3337933 3327960
[2026-03-10 12:21:46] 2026-03-10 11:21:46,437 [wrapper] Test setup, not cleaning
[2026-03-10 12:21:46] 2026-03-10 11:21:46,440 [wrapper] apfmon messages muted
[2026-03-10 12:21:46] 2026-03-10 11:21:46,442 [wrapper] ==== wrapper stdout END ====
[2026-03-10 12:21:46] 2026-03-10 11:21:46,444 [wrapper] ==== wrapper stderr END ====
[2026-03-10 12:21:46]  *** Error codes and diagnostics ***
[2026-03-10 12:21:46]     "exeErrorCode": 0,
[2026-03-10 12:21:46]     "exeErrorDiag": "",
[2026-03-10 12:21:46]     "pilotErrorCode": 0,
[2026-03-10 12:21:46]     "pilotErrorDiag": "",
[2026-03-10 12:21:46]  *** Listing of results directory ***
[2026-03-10 12:21:46] total 406180
[2026-03-10 12:21:46] -rwx------ 1 boinc boinc     36322 Mar  9 16:44 runpilot2-wrapper.sh
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc      5111 Mar  9 16:46 queuedata.json
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc    584627 Mar  9 16:46 pilot3.tar.gz
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc       100 Mar 10 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 12:21:46] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 10:33 run_atlas
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc       105 Mar 10 10:33 job.xml
[2026-03-10 12:21:46] -rw-r--r-- 2 boinc boinc 214221302 Mar 10 10:33 EVNT.48966985._000963.pool.root.1
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc      6680 Mar 10 10:33 init_data.xml
[2026-03-10 12:21:46] -rw-r--r-- 2 boinc boinc    597976 Mar 10 10:33 input.tar.gz
[2026-03-10 12:21:46] drwxrwx--x 2 boinc boinc      4096 Mar 10 10:33 shared
[2026-03-10 12:21:46] -rw-r--r-- 2 boinc boinc     15845 Mar 10 10:33 start_atlas.sh
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc         0 Mar 10 10:33 boinc_lockfile
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc      2592 Mar 10 10:33 pandaJob.out
[2026-03-10 12:21:46] -rw------- 1 boinc boinc   1005081 Mar 10 10:33 agis_schedconf.cvmfs.json
[2026-03-10 12:21:46] -rw------- 1 boinc boinc   1511578 Mar 10 10:33 agis_ddmendpoints.agis.ALL.json
[2026-03-10 12:21:46] -rw------- 1 boinc boinc       429 Mar 10 10:33 workernode_map.json
[2026-03-10 12:21:46] drwx------ 5 boinc boinc      4096 Mar 10 10:33 pilot3
[2026-03-10 12:21:46] -rw------- 1 boinc boinc 195350240 Mar 10 12:20 HITS.48966988._024726.pool.root.1
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc       529 Mar 10 12:20 boinc_task_state.xml
[2026-03-10 12:21:46] -rw------- 1 boinc boinc      1015 Mar 10 12:20 memory_monitor_summary.json
[2026-03-10 12:21:46] -rw------- 1 boinc boinc    278126 Mar 10 12:20 log.48966988._024726.job.log.tgz.1
[2026-03-10 12:21:46] -rw------- 1 boinc boinc      6317 Mar 10 12:20 heartbeat.json
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc        27 Mar 10 12:21 wrapper_checkpoint.txt
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc      8192 Mar 10 12:21 boinc_mmap_file
[2026-03-10 12:21:46] -rw------- 1 boinc boinc        95 Mar 10 12:21 pilot_heartbeat.json
[2026-03-10 12:21:46] -rw------- 1 boinc boinc      5344 Mar 10 12:21 pilotlog.txt
[2026-03-10 12:21:46] -rw------- 1 boinc boinc    932218 Mar 10 12:21 log.48966988._024726.job.log.1
[2026-03-10 12:21:46] -rw------- 1 boinc boinc       357 Mar 10 12:21 output.list
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc       620 Mar 10 12:21 runtime_log
[2026-03-10 12:21:46] -rw------- 1 boinc boinc   1228800 Mar 10 12:21 result.tar.gz
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc      8911 Mar 10 12:21 runtime_log.err
[2026-03-10 12:21:46] -rw------- 1 boinc boinc       660 Mar 10 12:21 kzrNDmIxrJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgHaLDmZ1mA7n.diag
[2026-03-10 12:21:46] -rw-r--r-- 1 boinc boinc     21010 Mar 10 12:21 stderr.txt
[2026-03-10 12:21:46] HITS file was successfully produced:
[2026-03-10 12:21:46] -rw------- 1 boinc boinc 195350240 Mar 10 12:20 shared/HITS.pool.root.1
[2026-03-10 12:21:46]  *** Contents of shared directory: ***
[2026-03-10 12:21:46] total 401784
[2026-03-10 12:21:46] -rw-r--r-- 2 boinc boinc 214221302 Mar 10 10:33 ATLAS.root_0
[2026-03-10 12:21:46] -rw-r--r-- 2 boinc boinc    597976 Mar 10 10:33 input.tar.gz
[2026-03-10 12:21:46] -rw-r--r-- 2 boinc boinc     15845 Mar 10 10:33 start_atlas.sh
[2026-03-10 12:21:46] -rw------- 1 boinc boinc 195350240 Mar 10 12:20 HITS.pool.root.1
[2026-03-10 12:21:46] -rw------- 1 boinc boinc   1228800 Mar 10 12:21 result.tar.gz
12:21:48 (3323872): run_atlas exited; CPU time 18550.716969
12:21:48 (3323872): called boinc_finish(0)

</stderr_txt>
]]>

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