Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:13:38 (3958963): wrapper (7.7.26015): starting
02:13:38 (3958963): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:13:38] Arguments: --nthreads 4
[2026-03-10 02:13:38] Threads: 4
[2026-03-10 02:13:38] Checking for CVMFS
[2026-03-10 02:13:38] No cvmfs_config command found, will try listing directly
[2026-03-10 02:13:38] CVMFS is ok
[2026-03-10 02:13:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:13:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:13:38] Further information can be found at the LHC@home message board.
[2026-03-10 02:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:13:38] Checking for apptainer binary...
[2026-03-10 02:13:38] which: no apptainer in ((null))
[2026-03-10 02:13:38] apptainer is not installed, using version from CVMFS
[2026-03-10 02:13:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:13:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-10 02:13:38] apptainer works
[2026-03-10 02:13:38] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:13:38] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:13:38] Starting ATLAS job with PandaID=7041088178
[2026-03-10 02:13:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 03:39:08]  *** The last 200 lines of the pilot log: ***
[2026-03-10 03:39:08]  is_tar=False
[2026-03-10 03:39:08]  lfn=log.48955015._009847.job.log.tgz.1
[2026-03-10 03:39:08]  mtime=0
[2026-03-10 03:39:08]  protocol_id=None
[2026-03-10 03:39:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 03:39:08]  replicas=None
[2026-03-10 03:39:08]  scope=mc23_13p6TeV
[2026-03-10 03:39:08]  status=None
[2026-03-10 03:39:08]  status_code=0
[2026-03-10 03:39:08]  storage_token=
[2026-03-10 03:39:08]  surl=/var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7041088178/log.48955015._009847.job.log.tgz.1
[2026-03-10 03:39:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/19/log.48955015._009847.job.log.tgz.1
[2026-03-10 03:39:08]  workdir=None
[2026-03-10 03:39:08] ]
[2026-03-10 03:39:08] 2026-03-10 02:38:07,290 | INFO     | transferring file log.48955015._009847.job.log.tgz.1 from /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7041088178/log.48955015._009847.job.log.tgz.1 to /var/lib/b
[2026-03-10 03:39:08] 2026-03-10 02:38:07,291 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7041088178/log.48955015._009847.job.log.tgz.1 /var/lib/boinc/var/slot24/slots/5/lo
[2026-03-10 03:39:08] 2026-03-10 02:38:07,307 | INFO     | adding to output.list: log.48955015._009847.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/19/log.48955015._009847.job.log.tg
[2026-03-10 03:39:08] 2026-03-10 02:38:07,308 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 03:39:08] 2026-03-10 02:38:07,308 | INFO     | summary of transferred files:
[2026-03-10 03:39:08] 2026-03-10 02:38:07,308 | INFO     |  -- lfn=log.48955015._009847.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 03:39:08] 2026-03-10 02:38:07,308 | INFO     | stage-out finished correctly
[2026-03-10 03:39:08] 2026-03-10 02:38:08,143 | INFO     | PID=3969195 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 03:39:08] 2026-03-10 02:38:08,143 | INFO     | .. there are 63 such processes running
[2026-03-10 03:39:08] 2026-03-10 02:38:09,143 | INFO     | time since job start (5057s) is within the limit (349056.0s)
[2026-03-10 03:39:08] 2026-03-10 02:38:09,756 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 03:39:08] 2026-03-10 02:38:10,642 | WARNING  | process 3997284 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 03:39:08] 2026-03-10 02:38:10,643 | INFO     | using path: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7041088178/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:39:08] 2026-03-10 02:38:11,148 | INFO     | time since job start (5059s) is within the limit (349056.0s)
[2026-03-10 03:39:08] 2026-03-10 02:38:11,182 | INFO     | number of running child processes to parent process 3997284: 1
[2026-03-10 03:39:08] 2026-03-10 02:38:11,182 | INFO     | maximum number of monitored processes: 6
[2026-03-10 03:39:08] 2026-03-10 02:38:12,497 | INFO     | job 7041088178 has state=finished
[2026-03-10 03:39:08] 2026-03-10 02:38:12,498 | INFO     | preparing for final server update for job 7041088178 in state='finished'
[2026-03-10 03:39:08] 2026-03-10 02:38:12,498 | INFO     | reading metadata from: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7041088178/jobReport.json
[2026-03-10 03:39:08] 2026-03-10 02:38:12,499 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot24/slots/5/workernode_map.json
[2026-03-10 03:39:08] 2026-03-10 02:38:12,500 | INFO     | this job has now completed (state=finished)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,500 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,500 | INFO     | log transfer has been attempted: DONE
[2026-03-10 03:39:08] 2026-03-10 02:38:12,500 | INFO     | job 7041088178 has finished - writing final server update
[2026-03-10 03:39:08] 2026-03-10 02:38:12,500 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_670770/.job.ad'
[2026-03-10 03:39:08] 2026-03-10 02:38:12,500 | INFO     | total number of processed events: 400 (read)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,519 | INFO     | using path: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7041088178/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,519 | INFO     | extracted standard info from prmon json
[2026-03-10 03:39:08] 2026-03-10 02:38:12,519 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 03:39:08] 2026-03-10 02:38:12,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 03:39:08] 2026-03-10 02:38:12,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 03:39:08] 2026-03-10 02:38:12,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | fitting pss+swap vs Time
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | sum of square deviations: 136095575.0
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | sum of deviations: 784280660.0000002
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | mean x: 1773107848.5
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | mean y: 2333273.5789473685
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | intersect: -10215590370.689137
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | chi2: 0.0002104168686269123
[2026-03-10 03:39:08] 2026-03-10 02:38:12,521 | INFO     | current memory leak: 5.76 B/s (using 76 data points, chi2=0.00)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | could have reported an average CPU frequency of 3542 MHz (6 samples)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | ..............................
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . Timing measurements:
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . get job = 0 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . initial setup = 5 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . payload setup = 7 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . stage-in = 0 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . payload execution = 5032 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . stage-out = 0 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | . log creation = 0 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,522 | INFO     | ..............................
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | 
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | job summary report
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | --------------------------------------------------
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | PanDA job id: 7041088178
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | task id: 48955015
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | errors: (none)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | pilot state: finished 
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | transexitcode: 0
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | exeerrorcode: 0
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | exeerrordiag: 
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | exitcode: 0
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | exitmsg: OK
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | cpuconsumptiontime: 18828 s
[2026-03-10 03:39:08] 2026-03-10 02:38:12,572 | INFO     | nevents: 400
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | neventsw: 0
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | pid: 3997284
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | pgrp: 3997284
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | corecount: 4
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | event service: False
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | sizes: {0: 2279760, 1: 2280277, 11: 2280277, 5043: 2306938, 5044: 2315958, 5047: 2316014, 5049: 2316336}
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | --------------------------------------------------
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | 
[2026-03-10 03:39:08] 2026-03-10 02:38:12,573 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/5
[2026-03-10 03:39:08] 2026-03-10 02:38:12,589 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,590 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 03:39:08] 2026-03-10 02:38:12,591 | INFO     | job 7041088178 has completed (purged errors)
[2026-03-10 03:39:08] 2026-03-10 02:38:12,591 | INFO     | overall cleanup function is called
[2026-03-10 03:39:08] 2026-03-10 02:38:13,598 | INFO     | --- collectZombieJob: --- 10, [3997284]
[2026-03-10 03:39:08] 2026-03-10 02:38:13,598 | INFO     | zombie collector waiting for pid 3997284
[2026-03-10 03:39:08] 2026-03-10 02:38:13,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 03:39:08] 2026-03-10 02:38:13,598 | INFO     | collected zombie processes
[2026-03-10 03:39:08] 2026-03-10 02:38:13,598 | INFO     | will attempt to kill all subprocesses of pid=3997284
[2026-03-10 03:39:08] 2026-03-10 02:38:14,100 | INFO     | process IDs to be killed: [3997284] (in reverse order)
[2026-03-10 03:39:08] 2026-03-10 02:38:14,361 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 03:39:08] 2026-03-10 02:38:14,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 03:39:08] 2026-03-10 02:38:14,393 | INFO     | did not find any defunct processes belonging to 3997284
[2026-03-10 03:39:08] 2026-03-10 02:38:14,424 | INFO     | did not find any defunct processes belonging to 3997284
[2026-03-10 03:39:08] 2026-03-10 02:38:14,424 | INFO     | ready for new job
[2026-03-10 03:39:08] 2026-03-10 02:38:14,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 03:39:08] 2026-03-10 02:38:14,425 | INFO     | **************************************
[2026-03-10 03:39:08] 2026-03-10 02:38:14,426 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 03:39:08] 2026-03-10 02:38:14,426 | INFO     | **************************************
[2026-03-10 03:39:08] 2026-03-10 02:38:14,426 | INFO     | 
[2026-03-10 03:39:08] 2026-03-10 02:38:14,432 | INFO     | architecture information:
[2026-03-10 03:39:08] 2026-03-10 02:38:14,432 | INFO     | executing command: cat /etc/os-release
[2026-03-10 03:39:08] 2026-03-10 02:38:14,443 | INFO     | cat /etc/os-release:
[2026-03-10 03:39:08] NAME="CentOS Linux"
[2026-03-10 03:39:08] VERSION="7 (Core)"
[2026-03-10 03:39:08] ID="centos"
[2026-03-10 03:39:08] ID_LIKE="rhel fedora"
[2026-03-10 03:39:08] VERSION_ID="7"
[2026-03-10 03:39:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 03:39:08] ANSI_COLOR="0;31"
[2026-03-10 03:39:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 03:39:08] HOME_URL="https://www.centos.org/"
[2026-03-10 03:39:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 03:39:08] 
[2026-03-10 03:39:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 03:39:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 03:39:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 03:39:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 03:39:08] 
[2026-03-10 03:39:08] 2026-03-10 02:38:14,444 | INFO     | **************************************
[2026-03-10 03:39:08] 2026-03-10 02:38:14,946 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/5
[2026-03-10 03:39:08] 2026-03-10 02:38:14,965 | INFO     | sufficient remaining disk space (21602762752 B)
[2026-03-10 03:39:08] 2026-03-10 02:38:14,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 03:39:08] 2026-03-10 02:38:14,965 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 03:39:08] 2026-03-10 02:38:14,965 | INFO     | update_server=False
[2026-03-10 03:39:08] 2026-03-10 02:38:14,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 03:39:08] 2026-03-10 02:38:14,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:39:08] 2026-03-10 02:38:14,966 | INFO     | aborting loop
[2026-03-10 03:39:08] 2026-03-10 02:38:15,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 03:39:08] 2026-03-10 02:38:15,378 | INFO     | all data control threads have been joined
[2026-03-10 03:39:08] 2026-03-10 02:38:15,505 | INFO     | all payload control threads have been joined
[2026-03-10 03:39:08] 2026-03-10 02:38:15,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 03:39:08] 2026-03-10 02:38:15,970 | INFO     | [job] retrieve thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:15,971 | INFO     | [job] job monitor thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,155 | INFO     | [job] validate thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,379 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,383 | INFO     | [data] control thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,475 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,510 | INFO     | [payload] control thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,624 | INFO     | all job control threads have been joined
[2026-03-10 03:39:08] 2026-03-10 02:38:16,651 | INFO     | [data] copytool_in thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,676 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:16,769 | INFO     | [payload] failed_post thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:17,235 | INFO     | [payload] validate_post thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:17,380 | INFO     | [data] copytool_out thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:17,464 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:17,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:39:08] 2026-03-10 02:38:17,629 | INFO     | [job] control thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:18,587 | INFO     | [job] queue monitor thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:19,823 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 03:39:08] 2026-03-10 02:38:44,889 | INFO     | PID=3969195 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:39:08] 2026-03-10 02:38:44,890 | INFO     | .. there are 64 such processes running
[2026-03-10 03:39:08] 2026-03-10 02:38:44,890 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 03:39:08] 2026-03-10 02:38:44,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 03:39:08] 2026-03-10 02:38:44,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 03:39:08] 2026-03-10 02:39:00,659 | INFO     | [monitor] cgroup control has ended
[2026-03-10 03:39:08] 2026-03-10 02:39:02,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23085221644096)>', '<ExcThread(monitor, started 23084899735296)>']
[2026-03-10 03:39:08] 2026-03-10 02:39:02,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 03:39:08] 2026-03-10 02:39:02,983 | INFO     | [monitor] control thread has ended
[2026-03-10 03:39:08] 2026-03-10 02:39:07,734 | INFO     | all workflow threads have been joined
[2026-03-10 03:39:08] 2026-03-10 02:39:07,735 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 03:39:08] 2026-03-10 02:39:07,735 | INFO     | traces error code: 0
[2026-03-10 03:39:08] 2026-03-10 02:39:07,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 03:39:08] 2026-03-10 02:39:07,880 [wrapper] ==== pilot stdout END ====
[2026-03-10 03:39:08] 2026-03-10 02:39:07,883 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 03:39:08] 2026-03-10 02:39:07,885 [wrapper] pilotpid: 3969195
[2026-03-10 03:39:08] 2026-03-10 02:39:07,887 [wrapper] Pilot exit status: 0
[2026-03-10 03:39:08] 2026-03-10 02:39:07,898 [wrapper] pandaids: 7041088178
[2026-03-10 03:39:08] 2026-03-10 02:39:08,032 [wrapper] cleanup supervisor_pilot  570588 3969196
[2026-03-10 03:39:08] 2026-03-10 02:39:08,034 [wrapper] Test setup, not cleaning
[2026-03-10 03:39:08] 2026-03-10 02:39:08,041 [wrapper] apfmon messages muted
[2026-03-10 03:39:08] 2026-03-10 02:39:08,050 [wrapper] ==== wrapper stdout END ====
[2026-03-10 03:39:08] 2026-03-10 02:39:08,053 [wrapper] ==== wrapper stderr END ====
[2026-03-10 03:39:08]  *** Error codes and diagnostics ***
[2026-03-10 03:39:08]     "exeErrorCode": 0,
[2026-03-10 03:39:08]     "exeErrorDiag": "",
[2026-03-10 03:39:08]     "pilotErrorCode": 0,
[2026-03-10 03:39:08]     "pilotErrorDiag": "",
[2026-03-10 03:39:08]  *** Listing of results directory ***
[2026-03-10 03:39:08] total 617985
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc    584627 Mar  9 20:08 pilot3.tar.gz
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc      5111 Mar  9 20:11 queuedata.json
[2026-03-10 03:39:08] -rwx------. 1 boinc boinc     36322 Mar  9 20:11 runpilot2-wrapper.sh
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 03:39:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:13 run_atlas
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:13 job.xml
[2026-03-10 03:39:08] -rw-r--r--. 2 boinc boinc 440875176 Mar 10 02:13 EVNT.46701403._002249.pool.root.1
[2026-03-10 03:39:08] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:13 start_atlas.sh
[2026-03-10 03:39:08] drwxrwx--x. 2 boinc boinc         5 Mar 10 02:13 shared
[2026-03-10 03:39:08] -rw-r--r--. 2 boinc boinc    597959 Mar 10 02:13 input.tar.gz
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc      6702 Mar 10 02:13 init_data.xml
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:13 boinc_lockfile
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc      2572 Mar 10 02:13 pandaJob.out
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc   1002346 Mar 10 02:13 agis_schedconf.cvmfs.json
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc   1511578 Mar 10 02:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc       444 Mar 10 02:13 workernode_map.json
[2026-03-10 03:39:08] drwx------. 5 boinc boinc        22 Mar 10 02:13 pilot3
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc 189369969 Mar 10 03:37 HITS.48955015._009847.pool.root.1
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc       530 Mar 10 03:37 boinc_task_state.xml
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc      1056 Mar 10 03:38 memory_monitor_summary.json
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc    298728 Mar 10 03:38 log.48955015._009847.job.log.tgz.1
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc      6386 Mar 10 03:38 heartbeat.json
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc        95 Mar 10 03:38 pilot_heartbeat.json
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc        27 Mar 10 03:39 wrapper_checkpoint.txt
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc      8192 Mar 10 03:39 boinc_mmap_file
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc      4829 Mar 10 03:39 pilotlog.txt
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc    734204 Mar 10 03:39 log.48955015._009847.job.log.1
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc       357 Mar 10 03:39 output.list
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc       620 Mar 10 03:39 runtime_log
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc   1054720 Mar 10 03:39 result.tar.gz
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc      9204 Mar 10 03:39 runtime_log.err
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc       669 Mar 10 03:39 f8vKDm1BvJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWYdLDm24y9Hm.diag
[2026-03-10 03:39:08] -rw-r--r--. 1 boinc boinc     21562 Mar 10 03:39 stderr.txt
[2026-03-10 03:39:08] HITS file was successfully produced:
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc 189369969 Mar 10 03:37 shared/HITS.pool.root.1
[2026-03-10 03:39:08]  *** Contents of shared directory: ***
[2026-03-10 03:39:08] total 616519
[2026-03-10 03:39:08] -rw-r--r--. 2 boinc boinc 440875176 Mar 10 02:13 ATLAS.root_0
[2026-03-10 03:39:08] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:13 start_atlas.sh
[2026-03-10 03:39:08] -rw-r--r--. 2 boinc boinc    597959 Mar 10 02:13 input.tar.gz
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc 189369969 Mar 10 03:37 HITS.pool.root.1
[2026-03-10 03:39:08] -rw-------. 1 boinc boinc   1054720 Mar 10 03:39 result.tar.gz
03:39:09 (3958963): run_atlas exited; CPU time 19085.305166
03:39:09 (3958963): called boinc_finish(0)

</stderr_txt>
]]>

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