Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:27:12 (1882171): wrapper (7.7.26015): starting
04:27:12 (1882171): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 04:27:12] Arguments: --nthreads 4
[2026-03-14 04:27:12] Threads: 4
[2026-03-14 04:27:12] Checking for CVMFS
[2026-03-14 04:27:13] No cvmfs_config command found, will try listing directly
[2026-03-14 04:27:13] CVMFS is ok
[2026-03-14 04:27:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:27:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:27:13] Further information can be found at the LHC@home message board.
[2026-03-14 04:27:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:27:13] Checking for apptainer binary...
[2026-03-14 04:27:13] which: no apptainer in ((null))
[2026-03-14 04:27:13] apptainer is not installed, using version from CVMFS
[2026-03-14 04:27:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:27:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-14 04:27:13] apptainer works
[2026-03-14 04:27:13] Set ATHENA_PROC_NUMBER=4
[2026-03-14 04:27:13] Set ATHENA_CORE_NUMBER=4
[2026-03-14 04:27:13] Starting ATLAS job with PandaID=7041087553
[2026-03-14 04:27:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:55:35]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:55:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 05:55:35]  replicas=None
[2026-03-14 05:55:35]  scope=mc23_13p6TeV
[2026-03-14 05:55:35]  status=None
[2026-03-14 05:55:35]  status_code=0
[2026-03-14 05:55:35]  storage_token=
[2026-03-14 05:55:35]  surl=/var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/log.48955015._009771.job.log.tgz.1
[2026-03-14 05:55:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/2e/log.48955015._009771.job.log.tgz.1
[2026-03-14 05:55:35]  workdir=None
[2026-03-14 05:55:35] ]
[2026-03-14 05:55:35] 2026-03-14 04:54:38,740 | INFO     | transferring file log.48955015._009771.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/log.48955015._009771.job.log.tgz.1 to /var/lib/
[2026-03-14 05:55:35] 2026-03-14 04:54:38,740 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/log.48955015._009771.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/12/
[2026-03-14 05:55:35] 2026-03-14 04:54:38,758 | INFO     | adding to output.list: log.48955015._009771.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/2e/log.48955015._009771.job.log.tg
[2026-03-14 05:55:35] 2026-03-14 04:54:38,759 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 05:55:35] 2026-03-14 04:54:38,759 | INFO     | summary of transferred files:
[2026-03-14 05:55:35] 2026-03-14 04:54:38,759 | INFO     |  -- lfn=log.48955015._009771.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 05:55:35] 2026-03-14 04:54:38,759 | INFO     | stage-out finished correctly
[2026-03-14 05:55:35] 2026-03-14 04:54:39,014 | INFO     | time since job start (5179s) is within the limit (349056.0s)
[2026-03-14 05:55:35] 2026-03-14 04:54:41,019 | INFO     | time since job start (5181s) is within the limit (349056.0s)
[2026-03-14 05:55:35] 2026-03-14 04:54:41,879 | WARNING  | process 1893450 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 05:55:35] 2026-03-14 04:54:41,880 | INFO     | using path: /var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:55:35] 2026-03-14 04:54:41,880 | INFO     | using path: /var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:55:35] 2026-03-14 04:54:41,880 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 05:55:35] 2026-03-14 04:54:41,880 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 05:55:35] 2026-03-14 04:54:41,884 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 05:55:35] 2026-03-14 04:54:42,441 | INFO     | number of running child processes to parent process 1893450: 1
[2026-03-14 05:55:35] 2026-03-14 04:54:42,442 | INFO     | maximum number of monitored processes: 6
[2026-03-14 05:55:35] 2026-03-14 04:54:43,030 | INFO     | time since job start (5183s) is within the limit (349056.0s)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,322 | INFO     | job 7041087553 has state=finished
[2026-03-14 05:55:35] 2026-03-14 04:54:44,325 | INFO     | preparing for final server update for job 7041087553 in state='finished'
[2026-03-14 05:55:35] 2026-03-14 04:54:44,325 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/jobReport.json
[2026-03-14 05:55:35] 2026-03-14 04:54:44,327 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/12/workernode_map.json
[2026-03-14 05:55:35] 2026-03-14 04:54:44,327 | INFO     | this job has now completed (state=finished)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,327 | INFO     | log transfer has been attempted: DONE
[2026-03-14 05:55:35] 2026-03-14 04:54:44,327 | INFO     | job 7041087553 has finished - writing final server update
[2026-03-14 05:55:35] 2026-03-14 04:54:44,328 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1411112/.job.ad'
[2026-03-14 05:55:35] 2026-03-14 04:54:44,328 | INFO     | total number of processed events: 400 (read)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,360 | INFO     | using path: /var/lib/boinc/var/slot56/slots/12/PanDA_Pilot-7041087553/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,360 | INFO     | extracted standard info from prmon json
[2026-03-14 05:55:35] 2026-03-14 04:54:44,360 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:55:35] 2026-03-14 04:54:44,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:55:35] 2026-03-14 04:54:44,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:55:35] 2026-03-14 04:54:44,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | sum of square deviations: 141539398.0
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | sum of deviations: 5612488.000000023
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | mean x: 1773461573.0
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | mean y: 2328882.5844155843
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | intersect: -67994518.09108867
[2026-03-14 05:55:35] 2026-03-14 04:54:44,362 | INFO     | chi2: 0.000735450838515475
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | current memory leak: 0.04 B/s (using 77 data points, chi2=0.00)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | could have reported an average CPU frequency of 3527 MHz (6 samples)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | ..............................
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . Timing measurements:
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . get job = 0 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . initial setup = 23 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . payload setup = 28 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . stage-in = 0 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . payload execution = 5143 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . stage-out = 0 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | . log creation = 0 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,363 | INFO     | ..............................
[2026-03-14 05:55:35] 2026-03-14 04:54:44,484 | INFO     | 
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | job summary report
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | --------------------------------------------------
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | PanDA job id: 7041087553
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | task id: 48955015
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | errors: (none)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | pilot state: finished 
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | transexitcode: 0
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | exeerrorcode: 0
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | exeerrordiag: 
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | exitcode: 0
[2026-03-14 05:55:35] 2026-03-14 04:54:44,485 | INFO     | exitmsg: OK
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | cpuconsumptiontime: 18457 s
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | nevents: 400
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | neventsw: 0
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | pid: 1893450
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | pgrp: 1893450
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | corecount: 4
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | event service: False
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | sizes: {0: 2279146, 1: 2280276, 5176: 2306737, 5177: 2315759, 5181: 2315815, 5183: 2316009}
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | --------------------------------------------------
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | 
[2026-03-14 05:55:35] 2026-03-14 04:54:44,486 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/12
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | job 7041087553 has completed (purged errors)
[2026-03-14 05:55:35] 2026-03-14 04:54:44,561 | INFO     | overall cleanup function is called
[2026-03-14 05:55:35] 2026-03-14 04:54:45,569 | INFO     | --- collectZombieJob: --- 10, [1893450]
[2026-03-14 05:55:35] 2026-03-14 04:54:45,569 | INFO     | zombie collector waiting for pid 1893450
[2026-03-14 05:55:35] 2026-03-14 04:54:45,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:55:35] 2026-03-14 04:54:45,569 | INFO     | collected zombie processes
[2026-03-14 05:55:35] 2026-03-14 04:54:45,569 | INFO     | will attempt to kill all subprocesses of pid=1893450
[2026-03-14 05:55:35] 2026-03-14 04:54:46,278 | INFO     | process IDs to be killed: [1893450] (in reverse order)
[2026-03-14 05:55:35] 2026-03-14 04:54:46,722 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:55:35] 2026-03-14 04:54:46,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:55:35] 2026-03-14 04:54:46,755 | INFO     | did not find any defunct processes belonging to 1893450
[2026-03-14 05:55:35] 2026-03-14 04:54:46,785 | INFO     | did not find any defunct processes belonging to 1893450
[2026-03-14 05:55:35] 2026-03-14 04:54:46,785 | INFO     | ready for new job
[2026-03-14 05:55:35] 2026-03-14 04:54:46,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:55:35] 2026-03-14 04:54:46,787 | INFO     | **************************************
[2026-03-14 05:55:35] 2026-03-14 04:54:46,787 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 05:55:35] 2026-03-14 04:54:46,787 | INFO     | **************************************
[2026-03-14 05:55:35] 2026-03-14 04:54:46,787 | INFO     | 
[2026-03-14 05:55:35] 2026-03-14 04:54:46,793 | INFO     | architecture information:
[2026-03-14 05:55:35] 2026-03-14 04:54:46,793 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:55:35] 2026-03-14 04:54:46,808 | INFO     | cat /etc/os-release:
[2026-03-14 05:55:35] NAME="CentOS Linux"
[2026-03-14 05:55:35] VERSION="7 (Core)"
[2026-03-14 05:55:35] ID="centos"
[2026-03-14 05:55:35] ID_LIKE="rhel fedora"
[2026-03-14 05:55:35] VERSION_ID="7"
[2026-03-14 05:55:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:55:35] ANSI_COLOR="0;31"
[2026-03-14 05:55:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:55:35] HOME_URL="https://www.centos.org/"
[2026-03-14 05:55:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:55:35] 
[2026-03-14 05:55:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:55:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:55:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:55:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:55:35] 
[2026-03-14 05:55:35] 2026-03-14 04:54:46,809 | INFO     | **************************************
[2026-03-14 05:55:35] 2026-03-14 04:54:47,314 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/12
[2026-03-14 05:55:35] 2026-03-14 04:54:47,410 | INFO     | sufficient remaining disk space (19685965824 B)
[2026-03-14 05:55:35] 2026-03-14 04:54:47,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:55:35] 2026-03-14 04:54:47,411 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:55:35] 2026-03-14 04:54:47,411 | INFO     | update_server=False
[2026-03-14 05:55:35] 2026-03-14 04:54:47,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:55:35] 2026-03-14 04:54:47,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:55:35] 2026-03-14 04:54:47,465 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 05:55:35] 2026-03-14 04:54:47,465 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 05:55:35] 2026-03-14 04:54:47,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:55:35] 2026-03-14 04:54:47,465 | INFO     | will abort loop
[2026-03-14 05:55:35] 2026-03-14 04:54:47,533 | INFO     | all data control threads have been joined
[2026-03-14 05:55:35] 2026-03-14 04:54:47,739 | INFO     | all payload control threads have been joined
[2026-03-14 05:55:35] 2026-03-14 04:54:47,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:55:35] 2026-03-14 04:54:48,417 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,471 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,539 | INFO     | [data] control thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,583 | INFO     | all job control threads have been joined
[2026-03-14 05:55:35] 2026-03-14 04:54:48,662 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,745 | INFO     | [payload] control thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,761 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,799 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:48,834 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:49,413 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:49,415 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:49,417 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:49,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:55:35] 2026-03-14 04:54:49,431 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:49,581 | INFO     | [job] validate thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:49,589 | INFO     | [job] control thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:50,437 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:54:51,969 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:55:35] 2026-03-14 04:55:16,772 | INFO     | PID=1887136 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 05:55:35] 2026-03-14 04:55:16,772 | INFO     | .. there are 50 such processes running
[2026-03-14 05:55:35] 2026-03-14 04:55:16,773 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:55:35] 2026-03-14 04:55:16,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:55:35] 2026-03-14 04:55:16,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:55:35] 2026-03-14 04:55:28,539 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:55:35] 2026-03-14 04:55:29,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22871998318400)>', '<ExcThread(monitor, started 22871763339008)>']
[2026-03-14 05:55:35] 2026-03-14 04:55:29,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:55:35] 2026-03-14 04:55:29,853 | INFO     | [monitor] control thread has ended
[2026-03-14 05:55:35] 2026-03-14 04:55:34,753 | INFO     | all workflow threads have been joined
[2026-03-14 05:55:35] 2026-03-14 04:55:34,753 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:55:35] 2026-03-14 04:55:34,753 | INFO     | traces error code: 0
[2026-03-14 05:55:35] 2026-03-14 04:55:34,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:55:35] 2026-03-14 04:55:34,889 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:55:35] 2026-03-14 04:55:34,893 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:55:35] 2026-03-14 04:55:34,897 [wrapper] pilotpid: 1887136
[2026-03-14 05:55:35] 2026-03-14 04:55:34,899 [wrapper] Pilot exit status: 0
[2026-03-14 05:55:35] 2026-03-14 04:55:34,927 [wrapper] pandaids: 7041087553
[2026-03-14 05:55:35] 2026-03-14 04:55:35,158 [wrapper] cleanup supervisor_pilot 2453438 1887137
[2026-03-14 05:55:35] 2026-03-14 04:55:35,163 [wrapper] Test setup, not cleaning
[2026-03-14 05:55:35] 2026-03-14 04:55:35,169 [wrapper] apfmon messages muted
[2026-03-14 05:55:35] 2026-03-14 04:55:35,173 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:55:35] 2026-03-14 04:55:35,176 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:55:35]  *** Error codes and diagnostics ***
[2026-03-14 05:55:35]     "exeErrorCode": 0,
[2026-03-14 05:55:35]     "exeErrorDiag": "",
[2026-03-14 05:55:35]     "pilotErrorCode": 0,
[2026-03-14 05:55:35]     "pilotErrorDiag": "",
[2026-03-14 05:55:35]  *** Listing of results directory ***
[2026-03-14 05:55:35] total 618904
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc    584627 Mar  9 20:08 pilot3.tar.gz
[2026-03-14 05:55:35] -rwx------. 1 boinc boinc     36322 Mar  9 20:08 runpilot2-wrapper.sh
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc      5111 Mar  9 20:08 queuedata.json
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc       100 Mar 14 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:55:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 03:57 run_atlas
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc       105 Mar 14 03:57 job.xml
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc      6707 Mar 14 04:27 init_data.xml
[2026-03-14 05:55:35] -rw-r--r--. 2 boinc boinc 443248110 Mar 14 04:27 EVNT.46701403._002248.pool.root.1
[2026-03-14 05:55:35] -rw-r--r--. 2 boinc boinc     15845 Mar 14 04:27 start_atlas.sh
[2026-03-14 05:55:35] drwxrwx--x. 2 boinc boinc      4096 Mar 14 04:27 shared
[2026-03-14 05:55:35] -rw-r--r--. 2 boinc boinc    597956 Mar 14 04:27 input.tar.gz
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc         0 Mar 14 04:27 boinc_lockfile
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc      2571 Mar 14 04:27 pandaJob.out
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc   1004579 Mar 14 04:27 agis_schedconf.cvmfs.json
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc   1511579 Mar 14 04:27 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc       443 Mar 14 04:28 workernode_map.json
[2026-03-14 05:55:35] drwx------. 5 boinc boinc      4096 Mar 14 04:28 pilot3
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc 184558967 Mar 14 05:54 HITS.48955015._009771.pool.root.1
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc       530 Mar 14 05:54 boinc_task_state.xml
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc      1041 Mar 14 05:54 memory_monitor_summary.json
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc        95 Mar 14 05:54 pilot_heartbeat.json
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc    268885 Mar 14 05:54 log.48955015._009771.job.log.tgz.1
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc      6355 Mar 14 05:54 heartbeat.json
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc      8192 Mar 14 05:55 boinc_mmap_file
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc        27 Mar 14 05:55 wrapper_checkpoint.txt
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc      5016 Mar 14 05:55 pilotlog.txt
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc    739252 Mar 14 05:55 log.48955015._009771.job.log.1
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc       357 Mar 14 05:55 output.list
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc       620 Mar 14 05:55 runtime_log
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc   1024000 Mar 14 05:55 result.tar.gz
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc      9221 Mar 14 05:55 runtime_log.err
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc       661 Mar 14 05:55 ibVKDmu8uJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm6paLDmdBAeAn.diag
[2026-03-14 05:55:35] -rw-r--r--. 1 boinc boinc     20522 Mar 14 05:55 stderr.txt
[2026-03-14 05:55:35] HITS file was successfully produced:
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc 184558967 Mar 14 05:54 shared/HITS.pool.root.1
[2026-03-14 05:55:35]  *** Contents of shared directory: ***
[2026-03-14 05:55:35] total 614704
[2026-03-14 05:55:35] -rw-r--r--. 2 boinc boinc 443248110 Mar 14 04:27 ATLAS.root_0
[2026-03-14 05:55:35] -rw-r--r--. 2 boinc boinc     15845 Mar 14 04:27 start_atlas.sh
[2026-03-14 05:55:35] -rw-r--r--. 2 boinc boinc    597956 Mar 14 04:27 input.tar.gz
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc 184558967 Mar 14 05:54 HITS.pool.root.1
[2026-03-14 05:55:35] -rw-------. 1 boinc boinc   1024000 Mar 14 05:55 result.tar.gz
05:55:36 (1882171): run_atlas exited; CPU time 18689.606001
05:55:36 (1882171): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN