Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-09 20:32:40 (4524): vboxwrapper version 26210
2026-03-09 20:32:40 (4524): BOINC client version: 8.0.2
2026-03-09 20:32:42 (4524): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-03-09 20:32:42 (4524): Successfully copied 'init_data.xml' to the shared directory.
2026-03-09 20:32:43 (4524): Create VM. (boinc_3a3368435989de2f, slot#0)
2026-03-09 20:32:43 (4524): Setting Memory Size for VM. (4100MB)
2026-03-09 20:32:44 (4524): Setting CPU Count for VM. (1)
2026-03-09 20:32:44 (4524): Setting Chipset Options for VM.
2026-03-09 20:32:45 (4524): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-09 20:32:45 (4524): Setting Boot Options for VM.
2026-03-09 20:32:46 (4524): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-09 20:32:46 (4524): Enabling VM Network Access.
2026-03-09 20:32:46 (4524): Disabling USB Support for VM.
2026-03-09 20:32:47 (4524): Disabling COM Port Support for VM.
2026-03-09 20:32:47 (4524): Disabling LPT Port Support for VM.
2026-03-09 20:32:48 (4524): Disabling Audio Support for VM.
2026-03-09 20:32:48 (4524): Disabling Clipboard Support for VM.
2026-03-09 20:32:48 (4524): Disabling Drag and Drop Support for VM.
2026-03-09 20:32:49 (4524): Adding storage controller(s) to VM.
2026-03-09 20:32:49 (4524): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-09 20:32:50 (4524): Adding VirtualBox Guest Additions to VM.
2026-03-09 20:32:50 (4524): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-09 20:32:51 (4524): forwarding host port 53488 to guest port 80
2026-03-09 20:32:51 (4524): Enabling remote desktop for VM.
2026-03-09 20:32:51 (4524): Required extension pack not installed, remote desktop not enabled.
2026-03-09 20:32:51 (4524): Enabling shared directory for VM.
2026-03-09 20:32:52 (4524): Starting VM using VBoxManage interface. (boinc_3a3368435989de2f, slot#0)
2026-03-09 20:33:02 (4524): Successfully started VM. (PID = '6784')
2026-03-09 20:33:02 (4524): Reporting VM Process ID to BOINC.
2026-03-09 20:33:02 (4524): Guest Log: BIOS: VirtualBox 6.1.12
2026-03-09 20:33:02 (4524): Guest Log: CPUID EDX: 0x178bfbff
2026-03-09 20:33:02 (4524): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-09 20:33:02 (4524): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-09 20:33:02 (4524): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-09 20:33:02 (4524): Guest Log: BIOS: Booting from Hard Disk...
2026-03-09 20:33:02 (4524): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-09 20:33:02 (4524): Detected: Web Application Enabled (http://localhost:53488)
2026-03-09 20:33:02 (4524): Preference change detected
2026-03-09 20:33:02 (4524): Setting CPU throttle for VM. (100%)
2026-03-09 20:33:02 (4524): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-09 20:33:34 (4524): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-09 20:33:34 (4524): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-09 20:33:34 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-09 20:33:35 (4524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-09 20:33:35 (4524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-09 20:33:46 (4524): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-09 20:33:46 (4524): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-09 20:34:33 (4524): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.002101 main     Log opened 2026-03-09T20:34:31.057098000Z
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.003018 main     OS Product: Linux
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.003412 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.003532 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.003637 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.003638 main     Process ID: 1247
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.003640 main     Package type: LINUX_64BITS_GENERIC
2026-03-09 20:34:33 (4524): Guest Log: 00:00:00.005465 main     5.2.32 r132073 started. Verbose level = 0
2026-03-09 20:34:34 (4524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-09 20:34:34 (4524): Guest Log: [INFO] Mounting shared directory
2026-03-09 20:34:34 (4524): Guest Log: [INFO] Checking for init_data.xml
2026-03-09 20:34:42 (4524): Guest Log: 00:00:10.074405 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 930 351 000ns (GuestNow=1 773 102 882 058 794 000 ns GuestLast=1 773 088 471 128 443 000 ns fSetTimeLastLoop=true )
2026-03-09 20:34:59 (4524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-09 20:34:59 (4524): Guest Log: [INFO] Detected branch: prod
2026-03-09 20:34:59 (4524): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-09 20:34:59 (4524): Guest Log: Copying input files
2026-03-09 20:35:04 (4524): Guest Log: Copied input files into RunAtlas.
2026-03-09 20:35:05 (4524): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-09 20:35:05 (4524): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-09 20:35:05 (4524): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-09 20:35:05 (4524): Guest Log: Further information can be found at the LHC@home message board.
2026-03-09 20:35:33 (4524): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-09 20:35:35 (4524): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-09 20:35:35 (4524): Guest Log: 2.6.3.0 1527 0 30080 157096 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-09 20:35:41 (4524): Guest Log: copied the webapp to /var/www
2026-03-09 20:35:41 (4524): Guest Log: core_number=1
2026-03-09 20:35:42 (4524): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-09 20:35:42 (4524): Guest Log:  *** Starting ATLAS job. (PandaID=7046723532 taskID=48958651) ***
2026-03-09 20:53:04 (4524): Guest Log:  *** Job finished ***
2026-03-09 20:53:04 (4524): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:52:34,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:52:55,008 | INFO     | [monitor] cgroup control has ended
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:52:55,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074721376064)>', '<ExcThread(monitor, started 140074276595456)>']
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:52:56,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:52:56,839 | INFO     | [monitor] control thread has ended
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:52:58,913 [wrapper] supervise_pilot (15 min periods counter: 2)
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:00,873 | INFO     | all workflow threads have been joined
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:00,875 | INFO     | end of generic workflow (traces error code: 0)
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:00,876 | INFO     | traces error code: 0
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:00,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,361 [wrapper] ==== pilot stdout END ====
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,397 [wrapper] ==== wrapper stdout RESUME ====
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,431 [wrapper] pilotpid: 5908
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,467 [wrapper] Pilot exit status: 0
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,671 [wrapper] pandaids: 7046723532
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,816 [wrapper] cleanup supervisor_pilot 25241 5909
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,854 [wrapper] Test setup, not cleaning
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,893 [wrapper] apfmon messages muted
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:01,955 [wrapper] ==== wrapper stdout END ====
2026-03-09 20:53:04 (4524): Guest Log: 2026-03-10 00:53:02,026 [wrapper] ==== wrapper stderr END ====
2026-03-09 20:53:04 (4524): Guest Log:  *** Error codes and diagnostics ***
2026-03-09 20:53:04 (4524): Guest Log:     "exeErrorCode": 65,
2026-03-09 20:53:04 (4524): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-09 20:53:04 (4524): Guest Log:     "pilotErrorCode": 1305,
2026-03-09 20:53:04 (4524): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-09 20:53:04 (4524): Guest Log:  *** Listing of results directory ***
2026-03-09 20:53:04 (4524): Guest Log: total 4228
2026-03-09 20:53:04 (4524): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Mar  9 02:53 pilot3.tar.gz
2026-03-09 20:53:04 (4524): Guest Log: -rwx------. 1 atlas atlas   36322 Mar  9 02:56 runpilot2-wrapper.sh
2026-03-09 20:53:04 (4524): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar  9 02:56 queuedata.json
2026-03-09 20:53:04 (4524): Guest Log: -rwxr-xr-x. 1 atlas atlas    6061 Mar 10 00:35 init_data.xml
2026-03-09 20:53:04 (4524): Guest Log: -rwxr-xr-x. 1 atlas atlas  597975 Mar 10 00:35 input.tar.gz
2026-03-09 20:53:04 (4524): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Mar 10 00:35 start_atlas.sh
2026-03-09 20:53:04 (4524): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 10 00:35 EVNT.48958649._000084.pool.root.1 -> /data/./ATLAS.root_0
2026-03-09 20:53:04 (4524): Guest Log: -rw-r--r--. 1 atlas atlas    2620 Mar 10 00:35 pandaJob.out
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas 1002346 Mar 10 00:38 agis_schedconf.cvmfs.json
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas 1511578 Mar 10 00:38 agis_ddmendpoints.agis.ALL.json
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas     432 Mar 10 00:38 workernode_map.json
2026-03-09 20:53:04 (4524): Guest Log: drwx------. 5 atlas atlas    4096 Mar 10 00:38 pilot3
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas   53111 Mar 10 00:50 log.48958651._002166.job.log.tgz.1
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas    6780 Mar 10 00:52 heartbeat.json
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas      95 Mar 10 00:52 pilot_heartbeat.json
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas    4801 Mar 10 00:53 pilotlog.txt
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas  186480 Mar 10 00:53 log.48958651._002166.job.log.1
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas     188 Mar 10 00:53 output.list
2026-03-09 20:53:04 (4524): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 10 00:53 runtime_log
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas  256000 Mar 10 00:53 result.tar.gz
2026-03-09 20:53:04 (4524): Guest Log: -rw-------. 1 atlas atlas     652 Mar 10 00:53 yj5LDm5xfJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmj9aLDmuUSq0n.diag
2026-03-09 20:53:04 (4524): Guest Log: -rw-r--r--. 1 atlas atlas    8490 Mar 10 00:53 runtime_log.err
2026-03-09 20:53:04 (4524): Guest Log: Looking for outputfile HITS.48958651._002166.pool.root.1
2026-03-09 20:53:04 (4524): Guest Log: No HITS file was produced
2026-03-09 20:53:04 (4524): Guest Log: Successfully finished the ATLAS job!
2026-03-09 20:53:04 (4524): Guest Log: Copying the results back to the shared directory!
2026-03-09 20:53:05 (4524): Guest Log:  *** Contents of shared directory: ***
2026-03-09 20:53:05 (4524): Guest Log: total 252468
2026-03-09 20:53:05 (4524): Guest Log: -rwxrwxrwx. 1 root root 257643514 Mar 10 00:32 ATLAS.root_0
2026-03-09 20:53:05 (4524): Guest Log: -rwxrwxrwx. 1 root root      6061 Mar 10 00:32 init_data.xml
2026-03-09 20:53:05 (4524): Guest Log: -rwxrwxrwx. 1 root root    597975 Mar  9 23:32 input.tar.gz
2026-03-09 20:53:05 (4524): Guest Log: -rwxrwxrwx. 1 root root    256000 Mar 10 00:53 result.tar.gz
2026-03-09 20:53:05 (4524): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  9 23:32 start_atlas.sh
2026-03-09 20:53:05 (4524): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-09 20:53:06 (4524): VM Completion File Detected.
2026-03-09 20:53:06 (4524): Powering off VM.
2026-03-09 20:53:08 (4524): Successfully stopped VM.
2026-03-09 20:53:08 (4524): Deregistering VM. (boinc_3a3368435989de2f, slot#0)
2026-03-09 20:53:09 (4524): Removing network bandwidth throttle group from VM.
2026-03-09 20:53:09 (4524): Removing VM from VirtualBox.
2026-03-09 20:53:14 (4524): called boinc_finish(0)

</stderr_txt>
]]>

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