Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:47 (2016568): wrapper (7.7.26015): starting
06:32:47 (2016568): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 06:32:47] Arguments: --nthreads 4
[2026-03-10 06:32:47] Threads: 4
[2026-03-10 06:32:47] Checking for CVMFS
[2026-03-10 06:32:47] No cvmfs_config command found, will try listing directly
[2026-03-10 06:32:47] CVMFS is ok
[2026-03-10 06:32:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 06:32:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 06:32:47] Further information can be found at the LHC@home message board.
[2026-03-10 06:32:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 06:32:47] Checking for apptainer binary...
[2026-03-10 06:32:47] which: no apptainer in ((null))
[2026-03-10 06:32:47] apptainer is not installed, using version from CVMFS
[2026-03-10 06:32:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 06:32:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-10 06:32:48] apptainer works
[2026-03-10 06:32:48] Set ATHENA_PROC_NUMBER=4
[2026-03-10 06:32:48] Set ATHENA_CORE_NUMBER=4
[2026-03-10 06:32:48] Starting ATLAS job with PandaID=7047808132
[2026-03-10 06:32:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 09:57:30]  *** The last 200 lines of the pilot log: ***
[2026-03-10 09:57:30] 2026-03-10 08:56:38,646 | INFO     | total number of processed events: 400 (read)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,658 | INFO     | using path: /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7047808132/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,659 | INFO     | extracted standard info from prmon json
[2026-03-10 09:57:30] 2026-03-10 08:56:38,659 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 09:57:30] 2026-03-10 08:56:38,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 09:57:30] 2026-03-10 08:56:38,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 09:57:30] 2026-03-10 08:56:38,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 09:57:30] 2026-03-10 08:56:38,663 | INFO     | fitting pss+swap vs Time
[2026-03-10 09:57:30] 2026-03-10 08:56:38,663 | INFO     | sum of square deviations: 2480604650.0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,665 | INFO     | sum of deviations: 15219724357.99999
[2026-03-10 09:57:30] 2026-03-10 08:56:38,665 | INFO     | mean x: 1773126876.5
[2026-03-10 09:57:30] 2026-03-10 08:56:38,665 | INFO     | mean y: 2334741.9
[2026-03-10 09:57:30] 2026-03-10 08:56:38,665 | INFO     | intersect: -10876667001.52231
[2026-03-10 09:57:30] 2026-03-10 08:56:38,665 | INFO     | chi2: 1.341223613789442
[2026-03-10 09:57:30] 2026-03-10 08:56:38,666 | INFO     | sum of square deviations: 2299168690.0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,667 | INFO     | sum of deviations: 14629547894.000017
[2026-03-10 09:57:30] 2026-03-10 08:56:38,667 | INFO     | mean x: 1773126724.0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,667 | INFO     | mean y: 2334246.0820512823
[2026-03-10 09:57:30] 2026-03-10 08:56:38,667 | INFO     | intersect: -11280022913.578707
[2026-03-10 09:57:30] 2026-03-10 08:56:38,667 | INFO     | chi2: 1.3419299041032107
[2026-03-10 09:57:30] 2026-03-10 08:56:38,667 | INFO     | current chi2=1.3419299041032107 (change=-0.05266014604180359 %)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,668 | INFO     | right removable region: 194
[2026-03-10 09:57:30] 2026-03-10 08:56:38,668 | INFO     | sum of square deviations: 2299168690.0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,669 | INFO     | sum of deviations: -10411192446.0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,669 | INFO     | mean x: 1773127029.0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,669 | INFO     | mean y: 2356009.517948718
[2026-03-10 09:57:30] 2026-03-10 08:56:38,669 | INFO     | intersect: 8031504462.354275
[2026-03-10 09:57:30] 2026-03-10 08:56:38,670 | INFO     | chi2: 0.02303654205315973
[2026-03-10 09:57:30] 2026-03-10 08:56:38,670 | INFO     | current chi2=0.02303654205315973 (change=98.28242346642905 %)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,670 | INFO     | sum of square deviations: 2126802667.5
[2026-03-10 09:57:30] 2026-03-10 08:56:38,671 | INFO     | sum of deviations: -9479957326.499996
[2026-03-10 09:57:30] 2026-03-10 08:56:38,671 | INFO     | mean x: 1773127181.5
[2026-03-10 09:57:30] 2026-03-10 08:56:38,671 | INFO     | mean y: 2355167.352631579
[2026-03-10 09:57:30] 2026-03-10 08:56:38,671 | INFO     | intersect: 7905848176.807968
[2026-03-10 09:57:30] 2026-03-10 08:56:38,672 | INFO     | chi2: 0.0197908228458967
[2026-03-10 09:57:30] 2026-03-10 08:56:38,672 | INFO     | current chi2=0.0197908228458967 (change=14.089437554356568 %)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,672 | INFO     | left removable region: 20
[2026-03-10 09:57:30] 2026-03-10 08:56:38,672 | INFO     | sum of square deviations: 1633472487.5
[2026-03-10 09:57:30] 2026-03-10 08:56:38,673 | INFO     | sum of deviations: -4756474878.000001
[2026-03-10 09:57:30] 2026-03-10 08:56:38,673 | INFO     | mean x: 1773127303.5
[2026-03-10 09:57:30] 2026-03-10 08:56:38,673 | INFO     | mean y: 2350410.9195402297
[2026-03-10 09:57:30] 2026-03-10 08:56:38,674 | INFO     | intersect: 5165483269.986831
[2026-03-10 09:57:30] 2026-03-10 08:56:38,674 | INFO     | chi2: 0.011636464888413668
[2026-03-10 09:57:30] 2026-03-10 08:56:38,674 | INFO     | current memory leak: -2.91 B/s (using 174 data points, chi2=0.01)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,674 | INFO     | could have reported an average CPU frequency of 2533 MHz (10 samples)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | ..............................
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . Timing measurements:
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . get job = 0 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . initial setup = 5 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . payload setup = 6 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . stage-in = 0 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . payload execution = 12190 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . stage-out = 1 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | . log creation = 0 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,675 | INFO     | ..............................
[2026-03-10 09:57:30] 2026-03-10 08:56:38,766 | INFO     | 
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | job summary report
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | --------------------------------------------------
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | PanDA job id: 7047808132
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | task id: 48958593
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | errors: (none)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | pilot state: finished 
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | transexitcode: 0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | exeerrorcode: 0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,767 | INFO     | exeerrordiag: 
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | exitcode: 0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | exitmsg: OK
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | cpuconsumptiontime: 46197 s
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | nevents: 400
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | neventsw: 0
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | pid: 2025480
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | pgrp: 2025480
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | corecount: 4
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | event service: False
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | sizes: {0: 2279853, 1: 2280314, 11: 2280314, 12201: 2309748, 12202: 2318824, 12204: 2318962}
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | --------------------------------------------------
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | 
[2026-03-10 09:57:30] 2026-03-10 08:56:38,768 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/4
[2026-03-10 09:57:30] 2026-03-10 08:56:38,791 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 09:57:30] 2026-03-10 08:56:38,793 | INFO     | job 7047808132 has completed (purged errors)
[2026-03-10 09:57:30] 2026-03-10 08:56:38,794 | INFO     | overall cleanup function is called
[2026-03-10 09:57:30] 2026-03-10 08:56:39,150 | WARNING  | process 2025480 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 09:57:30] 2026-03-10 08:56:39,417 | INFO     | using path: /var/lib/boinc/var/slot16/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:57:30] 2026-03-10 08:56:39,419 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7047808132/payload.stdout) since it has not been created yet
[2026-03-10 09:57:30] 2026-03-10 08:56:39,419 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/4
[2026-03-10 09:57:30] 2026-03-10 08:56:39,435 | INFO     | sufficient remaining disk space (20237516800 B)
[2026-03-10 09:57:30] 2026-03-10 08:56:39,436 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-10 09:57:30] 2026-03-10 08:56:39,436 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot16/slots/4/PanDA_Pilot-7047808132/HITS.48958593._000789.pool.root.1 since it does not exist
[2026-03-10 09:57:30] 2026-03-10 08:56:39,805 | INFO     | --- collectZombieJob: --- 10, [2025480]
[2026-03-10 09:57:30] 2026-03-10 08:56:39,806 | INFO     | zombie collector waiting for pid 2025480
[2026-03-10 09:57:30] 2026-03-10 08:56:39,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 09:57:30] 2026-03-10 08:56:39,806 | INFO     | collected zombie processes
[2026-03-10 09:57:30] 2026-03-10 08:56:39,806 | INFO     | will attempt to kill all subprocesses of pid=2025480
[2026-03-10 09:57:30] 2026-03-10 08:56:39,810 | INFO     | number of running child processes to parent process 2025480: 1
[2026-03-10 09:57:30] 2026-03-10 08:56:39,811 | INFO     | maximum number of monitored processes: 6
[2026-03-10 09:57:30] 2026-03-10 08:56:39,811 | INFO     | aborting job monitoring since job object (job id=7047808132) has expired
[2026-03-10 09:57:30] 2026-03-10 08:56:40,162 | INFO     | process IDs to be killed: [2025480] (in reverse order)
[2026-03-10 09:57:30] 2026-03-10 08:56:40,281 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 09:57:30] 2026-03-10 08:56:40,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 09:57:30] 2026-03-10 08:56:40,292 | INFO     | did not find any defunct processes belonging to 2025480
[2026-03-10 09:57:30] 2026-03-10 08:56:40,302 | INFO     | did not find any defunct processes belonging to 2025480
[2026-03-10 09:57:30] 2026-03-10 08:56:40,302 | INFO     | ready for new job
[2026-03-10 09:57:30] 2026-03-10 08:56:40,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 09:57:30] 2026-03-10 08:56:40,304 | INFO     | **************************************
[2026-03-10 09:57:30] 2026-03-10 08:56:40,304 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 09:57:30] 2026-03-10 08:56:40,304 | INFO     | **************************************
[2026-03-10 09:57:30] 2026-03-10 08:56:40,305 | INFO     | 
[2026-03-10 09:57:30] 2026-03-10 08:56:40,308 | INFO     | architecture information:
[2026-03-10 09:57:30] 2026-03-10 08:56:40,309 | INFO     | executing command: cat /etc/os-release
[2026-03-10 09:57:30] 2026-03-10 08:56:40,325 | INFO     | cat /etc/os-release:
[2026-03-10 09:57:30] NAME="CentOS Linux"
[2026-03-10 09:57:30] VERSION="7 (Core)"
[2026-03-10 09:57:30] ID="centos"
[2026-03-10 09:57:30] ID_LIKE="rhel fedora"
[2026-03-10 09:57:30] VERSION_ID="7"
[2026-03-10 09:57:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 09:57:30] ANSI_COLOR="0;31"
[2026-03-10 09:57:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 09:57:30] HOME_URL="https://www.centos.org/"
[2026-03-10 09:57:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 09:57:30] 
[2026-03-10 09:57:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 09:57:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 09:57:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 09:57:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 09:57:30] 
[2026-03-10 09:57:30] 2026-03-10 08:56:40,325 | INFO     | **************************************
[2026-03-10 09:57:30] 2026-03-10 08:56:40,827 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/4
[2026-03-10 09:57:30] 2026-03-10 08:56:40,842 | INFO     | sufficient remaining disk space (20239613952 B)
[2026-03-10 09:57:30] 2026-03-10 08:56:40,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 09:57:30] 2026-03-10 08:56:40,842 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 09:57:30] 2026-03-10 08:56:40,842 | INFO     | update_server=False
[2026-03-10 09:57:30] 2026-03-10 08:56:40,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 09:57:30] 2026-03-10 08:56:40,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:57:30] 2026-03-10 08:56:40,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 09:57:30] 2026-03-10 08:56:40,843 | INFO     | aborting loop
[2026-03-10 09:57:30] 2026-03-10 08:56:41,153 | INFO     | all data control threads have been joined
[2026-03-10 09:57:30] 2026-03-10 08:56:41,264 | INFO     | all payload control threads have been joined
[2026-03-10 09:57:30] 2026-03-10 08:56:41,844 | INFO     | [job] retrieve thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:41,849 | INFO     | [job] job monitor thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:41,950 | INFO     | [payload] validate_post thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:41,983 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,151 | INFO     | [job] validate thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,154 | INFO     | all job control threads have been joined
[2026-03-10 09:57:30] 2026-03-10 08:56:42,158 | INFO     | [data] control thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,212 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,269 | INFO     | [payload] control thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,710 | INFO     | [data] copytool_in thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,829 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:42,846 | INFO     | [data] copytool_out thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:43,012 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:43,160 | INFO     | [job] control thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:43,314 | INFO     | [payload] failed_post thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:43,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 09:57:30] 2026-03-10 08:56:43,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:57:30] 2026-03-10 08:56:44,776 | INFO     | [job] queue monitor thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:56:47,321 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 09:57:30] 2026-03-10 08:57:11,214 | INFO     | PID=2020666 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 09:57:30] 2026-03-10 08:57:11,214 | INFO     | .. there are 14 such processes running
[2026-03-10 09:57:30] 2026-03-10 08:57:11,214 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 09:57:30] 2026-03-10 08:57:11,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 09:57:30] 2026-03-10 08:57:11,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 09:57:30] 2026-03-10 08:57:23,913 | INFO     | [monitor] cgroup control has ended
[2026-03-10 09:57:30] 2026-03-10 08:57:25,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22528041617216)>', '<ExcThread(monitor, started 22527801042688)>']
[2026-03-10 09:57:30] 2026-03-10 08:57:26,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 09:57:30] 2026-03-10 08:57:26,287 | INFO     | [monitor] control thread has ended
[2026-03-10 09:57:30] 2026-03-10 08:57:30,392 | INFO     | all workflow threads have been joined
[2026-03-10 09:57:30] 2026-03-10 08:57:30,393 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 09:57:30] 2026-03-10 08:57:30,393 | INFO     | traces error code: 0
[2026-03-10 09:57:30] 2026-03-10 08:57:30,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 09:57:30] 2026-03-10 08:57:30,534 [wrapper] ==== pilot stdout END ====
[2026-03-10 09:57:30] 2026-03-10 08:57:30,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 09:57:30] 2026-03-10 08:57:30,540 [wrapper] pilotpid: 2020666
[2026-03-10 09:57:30] 2026-03-10 08:57:30,543 [wrapper] Pilot exit status: 0
[2026-03-10 09:57:30] 2026-03-10 08:57:30,553 [wrapper] pandaids: 7047808132
[2026-03-10 09:57:30] 2026-03-10 08:57:30,624 [wrapper] cleanup supervisor_pilot 2263593 2020667
[2026-03-10 09:57:30] 2026-03-10 08:57:30,627 [wrapper] Test setup, not cleaning
[2026-03-10 09:57:30] 2026-03-10 08:57:30,630 [wrapper] apfmon messages muted
[2026-03-10 09:57:30] 2026-03-10 08:57:30,633 [wrapper] ==== wrapper stdout END ====
[2026-03-10 09:57:30] 2026-03-10 08:57:30,636 [wrapper] ==== wrapper stderr END ====
[2026-03-10 09:57:30]  *** Error codes and diagnostics ***
[2026-03-10 09:57:30]     "exeErrorCode": 0,
[2026-03-10 09:57:30]     "exeErrorDiag": "",
[2026-03-10 09:57:30]     "pilotErrorCode": 0,
[2026-03-10 09:57:30]     "pilotErrorDiag": "",
[2026-03-10 09:57:30]  *** Listing of results directory ***
[2026-03-10 09:57:30] total 438212
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc    584627 Mar  9 23:47 pilot3.tar.gz
[2026-03-10 09:57:30] -rwx------. 1 boinc boinc     36322 Mar  9 23:47 runpilot2-wrapper.sh
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc      5111 Mar  9 23:49 queuedata.json
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc       100 Mar 10 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 09:57:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 06:32 run_atlas
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc       105 Mar 10 06:32 job.xml
[2026-03-10 09:57:30] -rw-r--r--. 2 boinc boinc 262857026 Mar 10 06:32 EVNT.48958591._000030.pool.root.1
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc      6561 Mar 10 06:32 init_data.xml
[2026-03-10 09:57:30] -rw-r--r--. 2 boinc boinc     15845 Mar 10 06:32 start_atlas.sh
[2026-03-10 09:57:30] drwxrwx--x. 2 boinc boinc      4096 Mar 10 06:32 shared
[2026-03-10 09:57:30] -rw-r--r--. 2 boinc boinc    597980 Mar 10 06:32 input.tar.gz
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc         0 Mar 10 06:32 boinc_lockfile
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc      2617 Mar 10 06:32 pandaJob.out
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc   1005073 Mar 10 06:32 agis_schedconf.cvmfs.json
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc       451 Mar 10 06:33 workernode_map.json
[2026-03-10 09:57:30] drwx------. 5 boinc boinc      4096 Mar 10 06:33 pilot3
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc 177733365 Mar 10 09:56 HITS.48958593._000789.pool.root.1
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc       531 Mar 10 09:56 boinc_task_state.xml
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc      1035 Mar 10 09:56 memory_monitor_summary.json
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc   1511578 Mar 10 09:56 agis_ddmendpoints.agis.ALL.json
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc        95 Mar 10 09:56 pilot_heartbeat.json
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc    382828 Mar 10 09:56 log.48958593._000789.job.log.tgz.1
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc      6399 Mar 10 09:56 heartbeat.json
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc      8192 Mar 10 09:57 boinc_mmap_file
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc        28 Mar 10 09:57 wrapper_checkpoint.txt
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc      4829 Mar 10 09:57 pilotlog.txt
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc   1715780 Mar 10 09:57 log.48958593._000789.job.log.1
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc       357 Mar 10 09:57 output.list
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc       620 Mar 10 09:57 runtime_log
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc   2119680 Mar 10 09:57 result.tar.gz
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc      9205 Mar 10 09:57 runtime_log.err
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc       665 Mar 10 09:57 DyDNDmRZyJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVydLDm9PZ0pn.diag
[2026-03-10 09:57:30] -rw-r--r--. 1 boinc boinc     21259 Mar 10 09:57 stderr.txt
[2026-03-10 09:57:30] HITS file was successfully produced:
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc 177733365 Mar 10 09:56 shared/HITS.pool.root.1
[2026-03-10 09:57:30]  *** Contents of shared directory: ***
[2026-03-10 09:57:30] total 432948
[2026-03-10 09:57:30] -rw-r--r--. 2 boinc boinc 262857026 Mar 10 06:32 ATLAS.root_0
[2026-03-10 09:57:30] -rw-r--r--. 2 boinc boinc     15845 Mar 10 06:32 start_atlas.sh
[2026-03-10 09:57:30] -rw-r--r--. 2 boinc boinc    597980 Mar 10 06:32 input.tar.gz
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc 177733365 Mar 10 09:56 HITS.pool.root.1
[2026-03-10 09:57:30] -rw-------. 1 boinc boinc   2119680 Mar 10 09:57 result.tar.gz
09:57:32 (2016568): run_atlas exited; CPU time 46672.745415
09:57:32 (2016568): called boinc_finish(0)

</stderr_txt>
]]>

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