Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:26 (638358): wrapper (7.7.26015): starting
18:47:26 (638358): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 18:47:26] Arguments: --nthreads 8
[2026-03-09 18:47:26] Threads: 8
[2026-03-09 18:47:26] Checking for CVMFS
[2026-03-09 18:47:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 18:47:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 18:47:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 18:47:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 18:47:28] 2.13.3.0 16090 178941 568832 157092 2 199 32514554 32935936 30045 16776704 0 1834457529 99.583 1973314938 50802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 18:47:28] CVMFS is ok
[2026-03-09 18:47:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:47:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:47:28] Further information can be found at the LHC@home message board.
[2026-03-09 18:47:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:47:28] Checking for apptainer binary...
[2026-03-09 18:47:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 18:47:28] Running /usr/bin/apptainer --version
[2026-03-09 18:47:28] apptainer version 1.4.5-2.el9
[2026-03-09 18:47:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:47:28] c7-9-15.aglt2.org
[2026-03-09 18:47:28] apptainer works
[2026-03-09 18:47:28] Set ATHENA_PROC_NUMBER=8
[2026-03-09 18:47:28] Set ATHENA_CORE_NUMBER=8
[2026-03-09 18:47:28] Starting ATLAS job with PandaID=7035486097
[2026-03-09 18:47:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 21:46:43]  *** The last 200 lines of the pilot log: ***
[2026-03-09 21:46:43] 2026-03-10 01:45:45,512 | INFO     | extracted standard info from prmon json
[2026-03-09 21:46:43] 2026-03-10 01:45:45,512 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 21:46:43] 2026-03-10 01:45:45,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 21:46:43] 2026-03-10 01:45:45,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 21:46:43] 2026-03-10 01:45:45,513 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 21:46:43] 2026-03-10 01:45:45,514 | INFO     | fitting pss+swap vs Time
[2026-03-09 21:46:43] 2026-03-10 01:45:45,515 | INFO     | sum of square deviations: 1661798600.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,515 | INFO     | sum of deviations: 10883157314.999994
[2026-03-09 21:46:43] 2026-03-10 01:45:45,516 | INFO     | mean x: 1773101831.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,516 | INFO     | mean y: 2464818.8914285717
[2026-03-09 21:46:43] 2026-03-10 01:45:45,516 | INFO     | intersect: -11609619920.070042
[2026-03-09 21:46:43] 2026-03-10 01:45:45,517 | INFO     | chi2: 2.1439795673603625
[2026-03-09 21:46:43] 2026-03-10 01:45:45,517 | INFO     | sum of square deviations: 1523386702.5
[2026-03-09 21:46:43] 2026-03-10 01:45:45,517 | INFO     | sum of deviations: 23397469056.499996
[2026-03-09 21:46:43] 2026-03-10 01:45:45,517 | INFO     | mean x: 1773101678.5
[2026-03-09 21:46:43] 2026-03-10 01:45:45,517 | INFO     | mean y: 2478273.3
[2026-03-09 21:46:43] 2026-03-10 01:45:45,517 | INFO     | intersect: -27230325839.175148
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | chi2: 1.1457563435167977
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | current chi2=1.1457563435167977 (change=46.55936274022253 %)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | sum of square deviations: 1392881930.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | sum of deviations: 22602170851.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | mean x: 1773101526.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | mean y: 2477343.7393939393
[2026-03-09 21:46:43] 2026-03-10 01:45:45,518 | INFO     | intersect: -28769482980.866737
[2026-03-09 21:46:43] 2026-03-10 01:45:45,519 | INFO     | chi2: 1.146336437857835
[2026-03-09 21:46:43] 2026-03-10 01:45:45,519 | INFO     | current chi2=1.146336437857835 (change=-0.05062981709153634 %)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,519 | INFO     | right removable region: 164
[2026-03-09 21:46:43] 2026-03-10 01:45:45,519 | INFO     | sum of square deviations: 1523386702.5
[2026-03-09 21:46:43] 2026-03-10 01:45:45,519 | INFO     | sum of deviations: -9684512012.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,519 | INFO     | mean x: 1773101983.5
[2026-03-09 21:46:43] 2026-03-10 01:45:45,520 | INFO     | mean y: 2487130.964705882
[2026-03-09 21:46:43] 2026-03-10 01:45:45,520 | INFO     | intersect: 11274495367.302044
[2026-03-09 21:46:43] 2026-03-10 01:45:45,520 | INFO     | chi2: 1.0259215249488458
[2026-03-09 21:46:43] 2026-03-10 01:45:45,520 | INFO     | current chi2=1.0259215249488458 (change=52.14872657522823 %)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,520 | INFO     | sum of square deviations: 1392881930.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,520 | INFO     | sum of deviations: -9873240461.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | mean x: 1773102136.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | mean y: 2487342.2303030305
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | intersect: 12570863292.545578
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | chi2: 1.0262471486285238
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | current chi2=1.0262471486285238 (change=-0.03173962839840692 %)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | left removable region: 20
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | sum of square deviations: 925859220.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | sum of deviations: 3041189953.0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | mean x: 1773102105.5
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | mean y: 2501009.5416666665
[2026-03-09 21:46:43] 2026-03-10 01:45:45,521 | INFO     | intersect: -5821646109.5956745
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | chi2: 0.000707276320032562
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | current memory leak: 3.28 B/s (using 144 data points, chi2=0.00)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | ..............................
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . Timing measurements:
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . get job = 0 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . initial setup = 16 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . payload setup = 7 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . stage-in = 0 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . payload execution = 10620 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . stage-out = 1 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | . log creation = 0 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,522 | INFO     | ..............................
[2026-03-09 21:46:43] 2026-03-10 01:45:45,605 | INFO     | 
[2026-03-09 21:46:43] 2026-03-10 01:45:45,605 | INFO     | job summary report
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | --------------------------------------------------
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | PanDA job id: 7035486097
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | task id: 48843162
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | errors: (none)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | pilot state: finished 
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | transexitcode: 0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | exeerrorcode: 0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | exeerrordiag: 
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | exitcode: 0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | exitmsg: OK
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | cpuconsumptiontime: 77402 s
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | nevents: 400
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | neventsw: 0
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | pid: 657882
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | pgrp: 657882
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | corecount: 8
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | event service: False
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | sizes: {0: 2255837, 1: 2280197, 11: 2280225, 10631: 2309378, 10632: 2318434, 10635: 2318636}
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | --------------------------------------------------
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | 
[2026-03-09 21:46:43] 2026-03-10 01:45:45,606 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2026-03-09 21:46:43] 2026-03-10 01:45:45,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,679 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,679 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,679 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,682 | INFO     | number of running child processes to parent process 657882: 1
[2026-03-09 21:46:43] 2026-03-10 01:45:45,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,687 | INFO     | maximum number of monitored processes: 6
[2026-03-09 21:46:43] 2026-03-10 01:45:45,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,695 | INFO     | aborting job monitoring since job object (job id=7035486097) has expired
[2026-03-09 21:46:43] 2026-03-10 01:45:45,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | job 7035486097 has completed (purged errors)
[2026-03-09 21:46:43] 2026-03-10 01:45:45,708 | INFO     | overall cleanup function is called
[2026-03-09 21:46:43] 2026-03-10 01:45:46,719 | INFO     | --- collectZombieJob: --- 10, [657882]
[2026-03-09 21:46:43] 2026-03-10 01:45:46,719 | INFO     | zombie collector waiting for pid 657882
[2026-03-09 21:46:43] 2026-03-10 01:45:46,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 21:46:43] 2026-03-10 01:45:46,720 | INFO     | collected zombie processes
[2026-03-09 21:46:43] 2026-03-10 01:45:46,720 | INFO     | will attempt to kill all subprocesses of pid=657882
[2026-03-09 21:46:43] 2026-03-10 01:45:47,217 | INFO     | process IDs to be killed: [657882] (in reverse order)
[2026-03-09 21:46:43] 2026-03-10 01:45:47,423 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 21:46:43] 2026-03-10 01:45:47,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 21:46:43] 2026-03-10 01:45:47,444 | INFO     | did not find any defunct processes belonging to 657882
[2026-03-09 21:46:43] 2026-03-10 01:45:47,464 | INFO     | did not find any defunct processes belonging to 657882
[2026-03-09 21:46:43] 2026-03-10 01:45:47,464 | INFO     | ready for new job
[2026-03-09 21:46:43] 2026-03-10 01:45:47,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 21:46:43] 2026-03-10 01:45:47,466 | INFO     | **************************************
[2026-03-09 21:46:43] 2026-03-10 01:45:47,467 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 21:46:43] 2026-03-10 01:45:47,467 | INFO     | **************************************
[2026-03-09 21:46:43] 2026-03-10 01:45:47,467 | INFO     | 
[2026-03-09 21:46:43] 2026-03-10 01:45:47,471 | INFO     | architecture information:
[2026-03-09 21:46:43] 2026-03-10 01:45:47,472 | INFO     | executing command: cat /etc/os-release
[2026-03-09 21:46:43] 2026-03-10 01:45:47,520 | INFO     | cat /etc/os-release:
[2026-03-09 21:46:43] NAME="CentOS Linux"
[2026-03-09 21:46:43] VERSION="7 (Core)"
[2026-03-09 21:46:43] ID="centos"
[2026-03-09 21:46:43] ID_LIKE="rhel fedora"
[2026-03-09 21:46:43] VERSION_ID="7"
[2026-03-09 21:46:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 21:46:43] ANSI_COLOR="0;31"
[2026-03-09 21:46:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 21:46:43] HOME_URL="https://www.centos.org/"
[2026-03-09 21:46:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 21:46:43] 
[2026-03-09 21:46:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 21:46:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 21:46:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 21:46:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 21:46:43] 
[2026-03-09 21:46:43] 2026-03-10 01:45:47,520 | INFO     | **************************************
[2026-03-09 21:46:43] 2026-03-10 01:45:48,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2026-03-09 21:46:43] 2026-03-10 01:45:48,073 | INFO     | sufficient remaining disk space (68495081472 B)
[2026-03-09 21:46:43] 2026-03-10 01:45:48,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 21:46:43] 2026-03-10 01:45:48,073 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 21:46:43] 2026-03-10 01:45:48,073 | INFO     | update_server=False
[2026-03-09 21:46:43] 2026-03-10 01:45:48,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 21:46:43] 2026-03-10 01:45:48,214 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 21:46:43] 2026-03-10 01:45:48,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 21:46:43] 2026-03-10 01:45:48,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:46:43] 2026-03-10 01:45:48,215 | INFO     | will abort loop
[2026-03-09 21:46:43] 2026-03-10 01:45:48,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 21:46:43] 2026-03-10 01:45:48,869 | INFO     | all data control threads have been joined
[2026-03-09 21:46:43] 2026-03-10 01:45:48,894 | INFO     | all payload control threads have been joined
[2026-03-09 21:46:43] 2026-03-10 01:45:49,079 | INFO     | [job] retrieve thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,220 | INFO     | [job] job monitor thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,272 | INFO     | [data] copytool_in thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,359 | INFO     | all job control threads have been joined
[2026-03-09 21:46:43] 2026-03-10 01:45:49,430 | INFO     | [payload] validate_post thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 21:46:43] 2026-03-10 01:45:49,497 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,773 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,876 | INFO     | [data] control thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:49,900 | INFO     | [payload] control thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:50,249 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:50,312 | INFO     | [payload] failed_post thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:50,363 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:50,365 | INFO     | [job] control thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:50,450 | INFO     | [job] validate thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:50,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:46:43] 2026-03-10 01:45:50,839 | INFO     | [data] copytool_out thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:51,625 | INFO     | [job] queue monitor thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:45:53,457 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 21:46:43] 2026-03-10 01:46:18,639 | INFO     | PID=645939 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 21:46:43] 2026-03-10 01:46:18,639 | INFO     | .. there are 39 such processes running
[2026-03-09 21:46:43] 2026-03-10 01:46:18,639 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 21:46:43] 2026-03-10 01:46:18,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 21:46:43] 2026-03-10 01:46:18,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 21:46:43] 2026-03-10 01:46:37,100 | INFO     | [monitor] cgroup control has ended
[2026-03-09 21:46:43] 2026-03-10 01:46:37,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421255120704)>', '<ExcThread(monitor, started 140420768052992)>']
[2026-03-09 21:46:43] 2026-03-10 01:46:37,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 21:46:43] 2026-03-10 01:46:37,753 | INFO     | [monitor] control thread has ended
[2026-03-09 21:46:43] 2026-03-10 01:46:42,614 | INFO     | all workflow threads have been joined
[2026-03-09 21:46:43] 2026-03-10 01:46:42,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 21:46:43] 2026-03-10 01:46:42,615 | INFO     | traces error code: 0
[2026-03-09 21:46:43] 2026-03-10 01:46:42,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 21:46:43] 2026-03-10 01:46:42,914 [wrapper] ==== pilot stdout END ====
[2026-03-09 21:46:43] 2026-03-10 01:46:42,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 21:46:43] 2026-03-10 01:46:42,948 [wrapper] pilotpid: 645939
[2026-03-09 21:46:43] 2026-03-10 01:46:42,967 [wrapper] Pilot exit status: 0
[2026-03-09 21:46:43] 2026-03-10 01:46:43,071 [wrapper] pandaids: 7035486097
[2026-03-09 21:46:43] 2026-03-10 01:46:43,377 [wrapper] cleanup supervisor_pilot 1427562 645940
[2026-03-09 21:46:43] 2026-03-10 01:46:43,393 [wrapper] Test setup, not cleaning
[2026-03-09 21:46:43] 2026-03-10 01:46:43,412 [wrapper] apfmon messages muted
[2026-03-09 21:46:43] 2026-03-10 01:46:43,434 [wrapper] ==== wrapper stdout END ====
[2026-03-09 21:46:43] 2026-03-10 01:46:43,457 [wrapper] ==== wrapper stderr END ====
[2026-03-09 21:46:43]  *** Error codes and diagnostics ***
[2026-03-09 21:46:43]     "exeErrorCode": 0,
[2026-03-09 21:46:43]     "exeErrorDiag": "",
[2026-03-09 21:46:43]     "pilotErrorCode": 0,
[2026-03-09 21:46:43]     "pilotErrorDiag": "",
[2026-03-09 21:46:43]  *** Listing of results directory ***
[2026-03-09 21:46:43] total 407704
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 14:52 queuedata.json
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 14:52 pilot3.tar.gz
[2026-03-09 21:46:43] -rwx------. 1 boincer umatlas     36322 Mar  1 14:52 runpilot2-wrapper.sh
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas       100 Mar  9 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 21:46:43] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 18:47 run_atlas
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas       105 Mar  9 18:47 job.xml
[2026-03-09 21:46:43] -rw-r--r--. 2 boincer umatlas 233690976 Mar  9 18:47 EVNT.48447530._000002.pool.root.1
[2026-03-09 21:46:43] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 18:47 start_atlas.sh
[2026-03-09 21:46:43] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 18:47 shared
[2026-03-09 21:46:43] -rw-r--r--. 2 boincer umatlas    597973 Mar  9 18:47 input.tar.gz
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas         0 Mar  9 18:47 boinc_lockfile
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas      2613 Mar  9 18:47 pandaJob.out
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas        57 Mar  9 18:47 setup.sh.local
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas   1002738 Mar  9 18:48 agis_schedconf.cvmfs.json
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas   1511578 Mar  9 18:48 agis_ddmendpoints.agis.ALL.json
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas       427 Mar  9 18:48 workernode_map.json
[2026-03-09 21:46:43] drwx------. 5 boincer umatlas      4096 Mar  9 18:48 pilot3
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas      7174 Mar  9 21:40 init_data.xml
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas 176060314 Mar  9 21:45 HITS.48843162._000077.pool.root.1
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas       529 Mar  9 21:45 boinc_task_state.xml
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas      1030 Mar  9 21:45 memory_monitor_summary.json
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas    409609 Mar  9 21:45 log.48843162._000077.job.log.tgz.1
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas        95 Mar  9 21:45 pilot_heartbeat.json
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas      6312 Mar  9 21:45 heartbeat.json
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 21:46 boinc_mmap_file
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas        27 Mar  9 21:46 wrapper_checkpoint.txt
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas      5006 Mar  9 21:46 pilotlog.txt
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas   1488736 Mar  9 21:46 log.48843162._000077.job.log.1
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas       357 Mar  9 21:46 output.list
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas       620 Mar  9 21:46 runtime_log
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas   1914880 Mar  9 21:46 result.tar.gz
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas      9355 Mar  9 21:46 runtime_log.err
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas       654 Mar  9 21:46 4HMLDmx01G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0SBLDmnSPdKo.diag
[2026-03-09 21:46:43] -rw-r--r--. 1 boincer umatlas     21007 Mar  9 21:46 stderr.txt
[2026-03-09 21:46:43] HITS file was successfully produced:
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas 176060314 Mar  9 21:45 shared/HITS.pool.root.1
[2026-03-09 21:46:43]  *** Contents of shared directory: ***
[2026-03-09 21:46:43] total 402632
[2026-03-09 21:46:43] -rw-r--r--. 2 boincer umatlas 233690976 Mar  9 18:47 ATLAS.root_0
[2026-03-09 21:46:43] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 18:47 start_atlas.sh
[2026-03-09 21:46:43] -rw-r--r--. 2 boincer umatlas    597973 Mar  9 18:47 input.tar.gz
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas 176060314 Mar  9 21:45 HITS.pool.root.1
[2026-03-09 21:46:43] -rw-------. 1 boincer umatlas   1914880 Mar  9 21:46 result.tar.gz
21:46:45 (638358): run_atlas exited; CPU time 77789.412009
21:46:45 (638358): called boinc_finish(0)

</stderr_txt>
]]>

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