Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:32:43 (2420299): wrapper (7.7.26015): starting
22:32:43 (2420299): wrapper: running run_atlas (--nthreads 3)
[2026-03-10 22:32:43] Arguments: --nthreads 3
[2026-03-10 22:32:43] Threads: 3
[2026-03-10 22:32:43] Checking for CVMFS
[2026-03-10 22:32:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 22:32:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 22:32:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 22:32:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 22:32:44] 2.9.2.0 2959 17552 88376 157130 0 50 25548969 36864001 0 130560 0 6838926 99.982 649128 11534 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 22:32:44] CVMFS is ok
[2026-03-10 22:32:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 22:32:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 22:32:44] Further information can be found at the LHC@home message board.
[2026-03-10 22:32:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 22:32:44] Checking for apptainer binary...
[2026-03-10 22:32:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 22:32:44] Running /usr/bin/apptainer --version
[2026-03-10 22:32:44] apptainer version 1.4.1-1.1
[2026-03-10 22:32:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 22:32:44] belleA265a
[2026-03-10 22:32:44] apptainer works
[2026-03-10 22:32:44] Set ATHENA_PROC_NUMBER=3
[2026-03-10 22:32:44] Set ATHENA_CORE_NUMBER=3
[2026-03-10 22:32:44] Starting ATLAS job with PandaID=7045813823
[2026-03-10 22:32:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 00:20:06]  *** The last 200 lines of the pilot log: ***
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | job 7045813823 has completed (purged errors)
[2026-03-11 00:20:06] 2026-03-10 23:19:28,026 | INFO     | overall cleanup function is called
[2026-03-11 00:20:06] 2026-03-10 23:19:29,032 | INFO     | --- collectZombieJob: --- 10, [2428775]
[2026-03-11 00:20:06] 2026-03-10 23:19:29,033 | INFO     | zombie collector waiting for pid 2428775
[2026-03-11 00:20:06] 2026-03-10 23:19:29,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 00:20:06] 2026-03-10 23:19:29,033 | INFO     | collected zombie processes
[2026-03-11 00:20:06] 2026-03-10 23:19:29,033 | INFO     | will attempt to kill all subprocesses of pid=2428775
[2026-03-11 00:20:06] 2026-03-10 23:19:29,074 | INFO     | process IDs to be killed: [2428775] (in reverse order)
[2026-03-11 00:20:06] 2026-03-10 23:19:29,098 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 00:20:06] 2026-03-10 23:19:29,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 00:20:06] 2026-03-10 23:19:29,099 | INFO     | did not find any defunct processes belonging to 2428775
[2026-03-11 00:20:06] 2026-03-10 23:19:29,100 | INFO     | did not find any defunct processes belonging to 2428775
[2026-03-11 00:20:06] 2026-03-10 23:19:29,100 | INFO     | ready for new job
[2026-03-11 00:20:06] 2026-03-10 23:19:29,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 00:20:06] 2026-03-10 23:19:29,101 | INFO     | **************************************
[2026-03-11 00:20:06] 2026-03-10 23:19:29,101 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 00:20:06] 2026-03-10 23:19:29,101 | INFO     | **************************************
[2026-03-11 00:20:06] 2026-03-10 23:19:29,101 | INFO     | 
[2026-03-11 00:20:06] 2026-03-10 23:19:29,102 | INFO     | architecture information:
[2026-03-11 00:20:06] 2026-03-10 23:19:29,102 | INFO     | executing command: cat /etc/os-release
[2026-03-11 00:20:06] 2026-03-10 23:19:29,110 | INFO     | cat /etc/os-release:
[2026-03-11 00:20:06] NAME="CentOS Linux"
[2026-03-11 00:20:06] VERSION="7 (Core)"
[2026-03-11 00:20:06] ID="centos"
[2026-03-11 00:20:06] ID_LIKE="rhel fedora"
[2026-03-11 00:20:06] VERSION_ID="7"
[2026-03-11 00:20:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 00:20:06] ANSI_COLOR="0;31"
[2026-03-11 00:20:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 00:20:06] HOME_URL="https://www.centos.org/"
[2026-03-11 00:20:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 00:20:06] 
[2026-03-11 00:20:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 00:20:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 00:20:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 00:20:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 00:20:06] 
[2026-03-11 00:20:06] 2026-03-10 23:19:29,110 | INFO     | **************************************
[2026-03-11 00:20:06] 2026-03-10 23:19:29,613 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-11 00:20:06] 2026-03-10 23:19:29,625 | INFO     | sufficient remaining disk space (329912418304 B)
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | INFO     | update_server=False
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:20:06] 2026-03-10 23:19:29,626 | INFO     | aborting loop
[2026-03-11 00:20:06] 2026-03-10 23:19:29,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 00:20:06] 2026-03-10 23:19:29,907 | INFO     | all job control threads have been joined
[2026-03-11 00:20:06] 2026-03-10 23:19:30,568 | INFO     | all data control threads have been joined
[2026-03-11 00:20:06] 2026-03-10 23:19:30,615 | INFO     | all payload control threads have been joined
[2026-03-11 00:20:06] 2026-03-10 23:19:30,627 | INFO     | [job] job monitor thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:30,630 | INFO     | [job] retrieve thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:30,631 | INFO     | [job] queue monitor thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:30,913 | INFO     | [job] control thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:30,991 | INFO     | [payload] validate_post thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,193 | INFO     | [job] validate thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,234 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 00:20:06] 2026-03-10 23:19:31,350 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,478 | INFO     | [data] copytool_in thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,574 | INFO     | [data] control thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,621 | INFO     | [payload] control thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,828 | INFO     | [data] copytool_out thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:31,864 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:32,065 | INFO     | [payload] failed_post thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:35,262 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:19:40,545 | INFO     | job.realtimelogging is not enabled
[2026-03-11 00:20:06] 2026-03-10 23:19:41,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 00:20:06] 2026-03-10 23:20:00,307 | INFO     | PID=2424345 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 00:20:06] 2026-03-10 23:20:00,307 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 00:20:06] 2026-03-10 23:20:00,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 00:20:06] 2026-03-10 23:20:00,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 00:20:06] 2026-03-10 23:20:00,865 | INFO     | [monitor] cgroup control has ended
[2026-03-11 00:20:06] 2026-03-10 23:20:01,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981262980928)>', '<ExcThread(monitor, started 139980466796288)>']
[2026-03-11 00:20:06] 2026-03-10 23:20:02,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 00:20:06] 2026-03-10 23:20:02,318 | INFO     | [monitor] control thread has ended
[2026-03-11 00:20:06] 2026-03-10 23:20:06,595 | INFO     | all workflow threads have been joined
[2026-03-11 00:20:06] 2026-03-10 23:20:06,595 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 00:20:06] 2026-03-10 23:20:06,596 | INFO     | traces error code: 0
[2026-03-11 00:20:06] 2026-03-10 23:20:06,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 00:20:06] 2026-03-10 23:20:06,646 [wrapper] ==== pilot stdout END ====
[2026-03-11 00:20:06] 2026-03-10 23:20:06,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 00:20:06] 2026-03-10 23:20:06,650 [wrapper] pilotpid: 2424345
[2026-03-11 00:20:06] 2026-03-10 23:20:06,653 [wrapper] Pilot exit status: 0
[2026-03-11 00:20:06] 2026-03-10 23:20:06,660 [wrapper] pandaids: 7045813823
[2026-03-11 00:20:06] 2026-03-10 23:20:06,675 [wrapper] cleanup supervisor_pilot 2434472 2424346
[2026-03-11 00:20:06] 2026-03-10 23:20:06,678 [wrapper] Test setup, not cleaning
[2026-03-11 00:20:06] 2026-03-10 23:20:06,680 [wrapper] apfmon messages muted
[2026-03-11 00:20:06] 2026-03-10 23:20:06,682 [wrapper] ==== wrapper stdout END ====
[2026-03-11 00:20:06] 2026-03-10 23:20:06,685 [wrapper] ==== wrapper stderr END ====
[2026-03-11 00:20:06]  *** Error codes and diagnostics ***
[2026-03-11 00:20:06]     "exeErrorCode": 0,
[2026-03-11 00:20:06]     "exeErrorDiag": "",
[2026-03-11 00:20:06]     "pilotErrorCode": 0,
[2026-03-11 00:20:06]     "pilotErrorDiag": "",
[2026-03-11 00:20:06]  *** Listing of results directory ***
[2026-03-11 00:20:06] total 557856
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc    584627 Mar  8 04:14 pilot3.tar.gz
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc      5111 Mar  8 04:15 queuedata.json
[2026-03-11 00:20:06] -rwx------ 1 boinc boinc     36322 Mar  8 04:15 runpilot2-wrapper.sh
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc       100 Mar 10 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 00:20:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 22:32 run_atlas
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc       105 Mar 10 22:32 job.xml
[2026-03-11 00:20:06] -rw-r--r-- 2 boinc boinc 322161462 Mar 10 22:32 EVNT.48997945._000041.pool.root.1
[2026-03-11 00:20:06] -rw-r--r-- 2 boinc boinc    597942 Mar 10 22:32 input.tar.gz
[2026-03-11 00:20:06] -rw-r--r-- 2 boinc boinc     15845 Mar 10 22:32 start_atlas.sh
[2026-03-11 00:20:06] drwxrwx--x 2 boinc boinc      4096 Mar 10 22:32 shared
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc         0 Mar 10 22:32 boinc_setup_complete
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc      6441 Mar 10 22:32 init_data.xml
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc         0 Mar 10 22:32 boinc_lockfile
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc      2571 Mar 10 22:32 pandaJob.out
[2026-03-11 00:20:06] -rw------- 1 boinc boinc   1006644 Mar 10 22:32 agis_schedconf.cvmfs.json
[2026-03-11 00:20:06] -rw------- 1 boinc boinc   1511578 Mar 10 22:32 agis_ddmendpoints.agis.ALL.json
[2026-03-11 00:20:06] -rw------- 1 boinc boinc       431 Mar 10 22:32 workernode_map.json
[2026-03-11 00:20:06] drwx------ 5 boinc boinc      4096 Mar 10 22:32 pilot3
[2026-03-11 00:20:06] -rw------- 1 boinc boinc 242784262 Mar 11 00:19 HITS.48997948._001008.pool.root.1
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc       529 Mar 11 00:19 boinc_task_state.xml
[2026-03-11 00:20:06] -rw------- 1 boinc boinc      1018 Mar 11 00:19 memory_monitor_summary.json
[2026-03-11 00:20:06] -rw------- 1 boinc boinc    269162 Mar 11 00:19 log.48997948._001008.job.log.tgz.1
[2026-03-11 00:20:06] -rw------- 1 boinc boinc        95 Mar 11 00:19 pilot_heartbeat.json
[2026-03-11 00:20:06] -rw------- 1 boinc boinc      6333 Mar 11 00:19 heartbeat.json
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc      8192 Mar 11 00:19 boinc_mmap_file
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc        27 Mar 11 00:19 wrapper_checkpoint.txt
[2026-03-11 00:20:06] -rw------- 1 boinc boinc      4820 Mar 11 00:20 pilotlog.txt
[2026-03-11 00:20:06] -rw------- 1 boinc boinc    925110 Mar 11 00:20 log.48997948._001008.job.log.1
[2026-03-11 00:20:06] -rw------- 1 boinc boinc       357 Mar 11 00:20 output.list
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc       620 Mar 11 00:20 runtime_log
[2026-03-11 00:20:06] -rw------- 1 boinc boinc   1208320 Mar 11 00:20 result.tar.gz
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc      8916 Mar 11 00:20 runtime_log.err
[2026-03-11 00:20:06] -rw------- 1 boinc boinc       661 Mar 11 00:20 jXlLDmcnJJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTzXLDmg6xLkm.diag
[2026-03-11 00:20:06] -rw-r--r-- 1 boinc boinc     11409 Mar 11 00:20 stderr.txt
[2026-03-11 00:20:06] HITS file was successfully produced:
[2026-03-11 00:20:06] -rw------- 1 boinc boinc 242784262 Mar 11 00:19 shared/HITS.pool.root.1
[2026-03-11 00:20:06]  *** Contents of shared directory: ***
[2026-03-11 00:20:06] total 553488
[2026-03-11 00:20:06] -rw-r--r-- 2 boinc boinc 322161462 Mar 10 22:32 ATLAS.root_0
[2026-03-11 00:20:06] -rw-r--r-- 2 boinc boinc    597942 Mar 10 22:32 input.tar.gz
[2026-03-11 00:20:06] -rw-r--r-- 2 boinc boinc     15845 Mar 10 22:32 start_atlas.sh
[2026-03-11 00:20:06] -rw------- 1 boinc boinc 242784262 Mar 11 00:19 HITS.pool.root.1
[2026-03-11 00:20:06] -rw------- 1 boinc boinc   1208320 Mar 11 00:20 result.tar.gz
00:20:08 (2420299): run_atlas exited; CPU time 18382.496479
00:20:08 (2420299): called boinc_finish(0)

</stderr_txt>
]]>

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