Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:51 (3407559): wrapper (7.7.26015): starting
18:22:51 (3407559): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:22:51] Arguments: --nthreads 4
[2026-03-09 18:22:51] Threads: 4
[2026-03-09 18:22:51] Checking for CVMFS
[2026-03-09 18:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 18:22:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 18:22:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 18:22:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 18:22:52] 2.13.3.0 1437033 5058 52576 157092 1 9 3306472 4096001 2748 130560 0 3808103 99.991 177971 977 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 18:22:52] CVMFS is ok
[2026-03-09 18:22:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:22:52] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 18:22:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 18:22:52] Further information can be found at the LHC@home message board.
[2026-03-09 18:22:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:22:52] Checking for apptainer binary...
[2026-03-09 18:22:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 18:22:52] Running /usr/bin/apptainer --version
[2026-03-09 18:22:52] apptainer version 1.4.5
[2026-03-09 18:22:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:22:52] T5810-Ubuntu
[2026-03-09 18:22:52] apptainer works
[2026-03-09 18:22:52] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:22:52] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:22:52] Starting ATLAS job with PandaID=7041002740
[2026-03-09 18:22:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 21:34:00]  *** The last 200 lines of the pilot log: ***
[2026-03-09 21:34:00] 2026-03-10 01:33:27,471 | INFO     | job 7041002740 has state=finished
[2026-03-09 21:34:00] 2026-03-10 01:33:27,471 | INFO     | preparing for final server update for job 7041002740 in state='finished'
[2026-03-09 21:34:00] 2026-03-10 01:33:27,472 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/21/PanDA_Pilot-7041002740/jobReport.json
[2026-03-09 21:34:00] 2026-03-10 01:33:27,474 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/21/workernode_map.json
[2026-03-09 21:34:00] 2026-03-10 01:33:27,475 | INFO     | this job has now completed (state=finished)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,475 | INFO     | log transfer has been attempted: DONE
[2026-03-09 21:34:00] 2026-03-10 01:33:27,475 | INFO     | job 7041002740 has finished - writing final server update
[2026-03-09 21:34:00] 2026-03-10 01:33:27,475 | INFO     | total number of processed events: 400 (read)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,484 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/21/PanDA_Pilot-7041002740/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,484 | INFO     | extracted standard info from prmon json
[2026-03-09 21:34:00] 2026-03-10 01:33:27,484 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 21:34:00] 2026-03-10 01:33:27,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 21:34:00] 2026-03-10 01:33:27,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 21:34:00] 2026-03-10 01:33:27,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 21:34:00] 2026-03-10 01:33:27,489 | INFO     | fitting pss+swap vs Time
[2026-03-09 21:34:00] 2026-03-10 01:33:27,490 | INFO     | sum of square deviations: 2027639878.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,491 | INFO     | sum of deviations: -20215782958.000004
[2026-03-09 21:34:00] 2026-03-10 01:33:27,491 | INFO     | mean x: 1773100688.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,491 | INFO     | mean y: 2368975.064171123
[2026-03-09 21:34:00] 2026-03-10 01:33:27,491 | INFO     | intersect: 17680369422.87766
[2026-03-09 21:34:00] 2026-03-10 01:33:27,492 | INFO     | chi2: 1.7673745264240484
[2026-03-09 21:34:00] 2026-03-10 01:33:27,492 | INFO     | sum of square deviations: 1869302025.5
[2026-03-09 21:34:00] 2026-03-10 01:33:27,494 | INFO     | sum of deviations: -19233818377.999996
[2026-03-09 21:34:00] 2026-03-10 01:33:27,494 | INFO     | mean x: 1773100535.5
[2026-03-09 21:34:00] 2026-03-10 01:33:27,494 | INFO     | mean y: 2369921.043956044
[2026-03-09 21:34:00] 2026-03-10 01:33:27,494 | INFO     | intersect: 18246341842.392273
[2026-03-09 21:34:00] 2026-03-10 01:33:27,494 | INFO     | chi2: 1.7653187133703545
[2026-03-09 21:34:00] 2026-03-10 01:33:27,495 | INFO     | current chi2=1.7653187133703545 (change=0.11632017000117105 %)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,495 | INFO     | right removable region: 181
[2026-03-09 21:34:00] 2026-03-10 01:33:27,495 | INFO     | sum of square deviations: 1869302025.5
[2026-03-09 21:34:00] 2026-03-10 01:33:27,496 | INFO     | sum of deviations: -48056426439.499985
[2026-03-09 21:34:00] 2026-03-10 01:33:27,497 | INFO     | mean x: 1773100840.5
[2026-03-09 21:34:00] 2026-03-10 01:33:27,497 | INFO     | mean y: 2395468.335164835
[2026-03-09 21:34:00] 2026-03-10 01:33:27,497 | INFO     | intersect: 45585660745.39076
[2026-03-09 21:34:00] 2026-03-10 01:33:27,497 | INFO     | chi2: 0.20192486158086762
[2026-03-09 21:34:00] 2026-03-10 01:33:27,497 | INFO     | current chi2=0.20192486158086762 (change=88.57486862224813 %)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,498 | INFO     | sum of square deviations: 1719429448.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,499 | INFO     | sum of deviations: -43113999313.99999
[2026-03-09 21:34:00] 2026-03-10 01:33:27,499 | INFO     | mean x: 1773100993.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,499 | INFO     | mean y: 2390421.8870056495
[2026-03-09 21:34:00] 2026-03-10 01:33:27,500 | INFO     | intersect: 44462182060.778786
[2026-03-09 21:34:00] 2026-03-10 01:33:27,500 | INFO     | chi2: 0.19828887032404346
[2026-03-09 21:34:00] 2026-03-10 01:33:27,500 | INFO     | current chi2=0.19828887032404346 (change=1.800665469500889 %)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,500 | INFO     | left removable region: 20
[2026-03-09 21:34:00] 2026-03-10 01:33:27,501 | INFO     | sum of square deviations: 1294014960.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,502 | INFO     | sum of deviations: -24948759782.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,502 | INFO     | mean x: 1773101115.0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,502 | INFO     | mean y: 2372887.9689440993
[2026-03-09 21:34:00] 2026-03-10 01:33:27,502 | INFO     | intersect: 34187969774.21465
[2026-03-09 21:34:00] 2026-03-10 01:33:27,502 | INFO     | chi2: 0.12339366524085549
[2026-03-09 21:34:00] 2026-03-10 01:33:27,503 | INFO     | current memory leak: -19.28 B/s (using 161 data points, chi2=0.12)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,503 | INFO     | could have reported an average CPU frequency of 2539 MHz (10 samples)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,503 | INFO     | ..............................
[2026-03-09 21:34:00] 2026-03-10 01:33:27,503 | INFO     | . Timing measurements:
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . get job = 0 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . initial setup = 7 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . payload setup = 6 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . stage-in = 0 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . payload execution = 11389 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . stage-out = 2 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | . log creation = 0 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,504 | INFO     | ..............................
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | 
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | job summary report
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | --------------------------------------------------
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | PanDA job id: 7041002740
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | task id: 48955010
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | errors: (none)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | pilot state: finished 
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | transexitcode: 0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | exeerrorcode: 0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | exeerrordiag: 
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | exitcode: 0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,927 | INFO     | exitmsg: OK
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | cpuconsumptiontime: 43854 s
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | nevents: 400
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | neventsw: 0
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | pid: 3416504
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | pgrp: 3416504
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | corecount: 4
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | event service: False
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | sizes: {0: 2279986, 1: 2280192, 11: 2280220, 11400: 2309489, 11403: 2318711}
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | --------------------------------------------------
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | 
[2026-03-09 21:34:00] 2026-03-10 01:33:27,928 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/21
[2026-03-09 21:34:00] 2026-03-10 01:33:27,948 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,950 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 21:34:00] 2026-03-10 01:33:27,951 | INFO     | job 7041002740 has completed (purged errors)
[2026-03-09 21:34:00] 2026-03-10 01:33:27,951 | INFO     | overall cleanup function is called
[2026-03-09 21:34:00] 2026-03-10 01:33:28,253 | INFO     | PID=3411832 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 21:34:00] 2026-03-10 01:33:28,253 | INFO     | .. there are 4 such processes running
[2026-03-09 21:34:00] 2026-03-10 01:33:28,959 | INFO     | --- collectZombieJob: --- 10, [3416504]
[2026-03-09 21:34:00] 2026-03-10 01:33:28,959 | INFO     | zombie collector waiting for pid 3416504
[2026-03-09 21:34:00] 2026-03-10 01:33:28,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 21:34:00] 2026-03-10 01:33:28,959 | INFO     | collected zombie processes
[2026-03-09 21:34:00] 2026-03-10 01:33:28,959 | INFO     | will attempt to kill all subprocesses of pid=3416504
[2026-03-09 21:34:00] 2026-03-10 01:33:29,203 | INFO     | process IDs to be killed: [3416504] (in reverse order)
[2026-03-09 21:34:00] 2026-03-10 01:33:29,275 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 21:34:00] 2026-03-10 01:33:29,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 21:34:00] 2026-03-10 01:33:29,282 | INFO     | did not find any defunct processes belonging to 3416504
[2026-03-09 21:34:00] 2026-03-10 01:33:29,287 | INFO     | did not find any defunct processes belonging to 3416504
[2026-03-09 21:34:00] 2026-03-10 01:33:29,288 | INFO     | ready for new job
[2026-03-09 21:34:00] 2026-03-10 01:33:29,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 21:34:00] 2026-03-10 01:33:29,290 | INFO     | **************************************
[2026-03-09 21:34:00] 2026-03-10 01:33:29,290 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 21:34:00] 2026-03-10 01:33:29,290 | INFO     | **************************************
[2026-03-09 21:34:00] 2026-03-10 01:33:29,290 | INFO     | 
[2026-03-09 21:34:00] 2026-03-10 01:33:29,292 | INFO     | architecture information:
[2026-03-09 21:34:00] 2026-03-10 01:33:29,293 | INFO     | executing command: cat /etc/os-release
[2026-03-09 21:34:00] 2026-03-10 01:33:29,310 | INFO     | cat /etc/os-release:
[2026-03-09 21:34:00] NAME="CentOS Linux"
[2026-03-09 21:34:00] VERSION="7 (Core)"
[2026-03-09 21:34:00] ID="centos"
[2026-03-09 21:34:00] ID_LIKE="rhel fedora"
[2026-03-09 21:34:00] VERSION_ID="7"
[2026-03-09 21:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 21:34:00] ANSI_COLOR="0;31"
[2026-03-09 21:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 21:34:00] HOME_URL="https://www.centos.org/"
[2026-03-09 21:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 21:34:00] 
[2026-03-09 21:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 21:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 21:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 21:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 21:34:00] 
[2026-03-09 21:34:00] 2026-03-10 01:33:29,310 | INFO     | **************************************
[2026-03-09 21:34:00] 2026-03-10 01:33:29,813 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/21
[2026-03-09 21:34:00] 2026-03-10 01:33:29,828 | INFO     | sufficient remaining disk space (405362704384 B)
[2026-03-09 21:34:00] 2026-03-10 01:33:29,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 21:34:00] 2026-03-10 01:33:29,828 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 21:34:00] 2026-03-10 01:33:29,828 | INFO     | update_server=False
[2026-03-09 21:34:00] 2026-03-10 01:33:29,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 21:34:00] 2026-03-10 01:33:29,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:34:00] 2026-03-10 01:33:29,829 | INFO     | aborting loop
[2026-03-09 21:34:00] 2026-03-10 01:33:30,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 21:34:00] 2026-03-10 01:33:30,059 | INFO     | all data control threads have been joined
[2026-03-09 21:34:00] 2026-03-10 01:33:30,177 | INFO     | all job control threads have been joined
[2026-03-09 21:34:00] 2026-03-10 01:33:30,288 | INFO     | all payload control threads have been joined
[2026-03-09 21:34:00] 2026-03-10 01:33:30,782 | INFO     | [monitor] cgroup control has ended
[2026-03-09 21:34:00] 2026-03-10 01:33:30,833 | INFO     | [job] retrieve thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:30,834 | INFO     | [job] job monitor thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:30,857 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:30,945 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,006 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,064 | INFO     | [data] control thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,182 | INFO     | [job] control thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,254 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,294 | INFO     | [payload] control thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,379 | INFO     | [payload] validate_post thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,484 | INFO     | [data] copytool_in thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:31,980 | INFO     | [payload] failed_post thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:32,005 | INFO     | [data] copytool_out thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:32,279 | INFO     | [job] validate thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:32,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:34:00] 2026-03-10 01:33:33,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 21:34:00] 2026-03-10 01:33:33,634 | INFO     | [job] queue monitor thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:37,116 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 21:34:00] 2026-03-10 01:33:38,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129007131973440)>', '<ExcThread(monitor, started 129006506596096)>']
[2026-03-09 21:34:00] 2026-03-10 01:33:43,742 | INFO     | all workflow threads have been joined
[2026-03-09 21:34:00] 2026-03-10 01:33:43,742 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 21:34:00] 2026-03-10 01:33:43,742 | INFO     | traces error code: 0
[2026-03-09 21:34:00] 2026-03-10 01:33:43,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 21:34:00] 2026-03-10 01:34:00,632 | INFO     | PID=3411832 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 21:34:00] 2026-03-10 01:34:00,633 | INFO     | .. there are 4 such processes running
[2026-03-09 21:34:00] 2026-03-10 01:34:00,634 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 21:34:00] 2026-03-10 01:34:00,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 21:34:00] 2026-03-10 01:34:00,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 21:34:00] 2026-03-10 01:34:00,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 21:34:00] 2026-03-10 01:34:00,634 | INFO     | [monitor] control thread has ended
[2026-03-09 21:34:00] 2026-03-10 01:34:00,747 [wrapper] ==== pilot stdout END ====
[2026-03-09 21:34:00] 2026-03-10 01:34:00,750 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 21:34:00] 2026-03-10 01:34:00,755 [wrapper] pilotpid: 3411832
[2026-03-09 21:34:00] 2026-03-10 01:34:00,758 [wrapper] Pilot exit status: 0
[2026-03-09 21:34:00] 2026-03-10 01:34:00,775 [wrapper] pandaids: 7041002740
[2026-03-09 21:34:00] 2026-03-10 01:34:00,819 [wrapper] cleanup supervisor_pilot 3504813 3411833
[2026-03-09 21:34:00] 2026-03-10 01:34:00,825 [wrapper] Test setup, not cleaning
[2026-03-09 21:34:00] 2026-03-10 01:34:00,831 [wrapper] apfmon messages muted
[2026-03-09 21:34:00] 2026-03-10 01:34:00,838 [wrapper] ==== wrapper stdout END ====
[2026-03-09 21:34:00] 2026-03-10 01:34:00,843 [wrapper] ==== wrapper stderr END ====
[2026-03-09 21:34:00]  *** Error codes and diagnostics ***
[2026-03-09 21:34:00]     "exeErrorCode": 0,
[2026-03-09 21:34:00]     "exeErrorDiag": "",
[2026-03-09 21:34:00]     "pilotErrorCode": 0,
[2026-03-09 21:34:00]     "pilotErrorDiag": "",
[2026-03-09 21:34:00]  *** Listing of results directory ***
[2026-03-09 21:34:00] total 617216
[2026-03-09 21:34:00] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  9 13:06 pilot3.tar.gz
[2026-03-09 21:34:00] -rwx------ 1 whitlerd whitlerd     36322 Mar  9 13:49 runpilot2-wrapper.sh
[2026-03-09 21:34:00] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  9 13:51 queuedata.json
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 21:34:00] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 18:22 run_atlas
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 18:22 job.xml
[2026-03-09 21:34:00] -rw-r--r-- 2 whitlerd whitlerd 438321928 Mar  9 18:22 EVNT.46701403._001394.pool.root.1
[2026-03-09 21:34:00] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 18:22 start_atlas.sh
[2026-03-09 21:34:00] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 18:22 shared
[2026-03-09 21:34:00] -rw-r--r-- 2 whitlerd whitlerd    597965 Mar  9 18:22 input.tar.gz
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd      9087 Mar  9 18:22 init_data.xml
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 18:22 boinc_setup_complete
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 18:22 boinc_lockfile
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd      2562 Mar  9 18:22 pandaJob.out
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd   1002738 Mar  9 18:23 agis_schedconf.cvmfs.json
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd       433 Mar  9 18:23 workernode_map.json
[2026-03-09 21:34:00] drwx------ 5 whitlerd whitlerd      4096 Mar  9 18:23 pilot3
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd 185741961 Mar  9 21:32 HITS.48955010._019720.pool.root.1
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar  9 21:32 boinc_task_state.xml
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd      1031 Mar  9 21:33 memory_monitor_summary.json
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 21:33 agis_ddmendpoints.agis.ALL.json
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd    367174 Mar  9 21:33 log.48955010._019720.job.log.tgz.1
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd      6346 Mar  9 21:33 heartbeat.json
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 21:33 boinc_mmap_file
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  9 21:33 wrapper_checkpoint.txt
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd        95 Mar  9 21:34 pilot_heartbeat.json
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd       822 Mar  9 21:34 pilotlog.txt
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd   1647790 Mar  9 21:34 log.48955010._019720.job.log.1
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd       357 Mar  9 21:34 output.list
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 21:34 runtime_log
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd   2037760 Mar  9 21:34 result.tar.gz
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd       649 Mar  9 21:34 ys9NDmTutJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYLdLDm19TsOm.diag
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  9 21:34 runtime_log.err
[2026-03-09 21:34:00] -rw-rw-r-- 1 whitlerd whitlerd     14140 Mar  9 21:34 stderr.txt
[2026-03-09 21:34:00] HITS file was successfully produced:
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd 185741961 Mar  9 21:32 shared/HITS.pool.root.1
[2026-03-09 21:34:00]  *** Contents of shared directory: ***
[2026-03-09 21:34:00] total 612044
[2026-03-09 21:34:00] -rw-r--r-- 2 whitlerd whitlerd 438321928 Mar  9 18:22 ATLAS.root_0
[2026-03-09 21:34:00] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 18:22 start_atlas.sh
[2026-03-09 21:34:00] -rw-r--r-- 2 whitlerd whitlerd    597965 Mar  9 18:22 input.tar.gz
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd 185741961 Mar  9 21:32 HITS.pool.root.1
[2026-03-09 21:34:00] -rw------- 1 whitlerd whitlerd   2037760 Mar  9 21:34 result.tar.gz
21:34:02 (3407559): run_atlas exited; CPU time 44208.046529
21:34:02 (3407559): called boinc_finish(0)

</stderr_txt>
]]>

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