Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:29 (3242419): wrapper (7.7.26015): starting
05:13:29 (3242419): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 05:13:29] Arguments: --nthreads 4
[2026-03-10 05:13:29] Threads: 4
[2026-03-10 05:13:29] Checking for CVMFS
[2026-03-10 05:13:29] No cvmfs_config command found, will try listing directly
[2026-03-10 05:13:29] CVMFS is ok
[2026-03-10 05:13:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 05:13:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 05:13:29] Further information can be found at the LHC@home message board.
[2026-03-10 05:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 05:13:29] Checking for apptainer binary...
[2026-03-10 05:13:29] which: no apptainer in ((null))
[2026-03-10 05:13:29] apptainer is not installed, using version from CVMFS
[2026-03-10 05:13:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 05:13:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-10 05:13:30] apptainer works
[2026-03-10 05:13:30] Set ATHENA_PROC_NUMBER=4
[2026-03-10 05:13:30] Set ATHENA_CORE_NUMBER=4
[2026-03-10 05:13:30] Starting ATLAS job with PandaID=7047771292
[2026-03-10 05:13:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 06:57:58]  *** The last 200 lines of the pilot log: ***
[2026-03-10 06:57:58] 2026-03-10 05:57:13,100 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_676643/.job.ad'
[2026-03-10 06:57:58] 2026-03-10 05:57:13,100 | INFO     | total number of processed events: 400 (read)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,117 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7047771292/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,118 | INFO     | extracted standard info from prmon json
[2026-03-10 06:57:58] 2026-03-10 05:57:13,118 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 06:57:58] 2026-03-10 05:57:13,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 06:57:58] 2026-03-10 05:57:13,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 06:57:58] 2026-03-10 05:57:13,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 06:57:58] 2026-03-10 05:57:13,119 | INFO     | fitting pss+swap vs Time
[2026-03-10 06:57:58] 2026-03-10 05:57:13,119 | INFO     | sum of square deviations: 329031285.5
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | sum of deviations: 5040054240.000002
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | mean x: 1773119121.5
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | mean y: 2287909.6078431373
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | intersect: -27158097561.82525
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | chi2: 1.9836352742268817
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | sum of square deviations: 282974608.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | sum of deviations: 11122526805.000002
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | mean x: 1773118969.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | mean y: 2307178.030927835
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | intersect: -69691448740.72087
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | chi2: 1.1170453479318334
[2026-03-10 06:57:58] 2026-03-10 05:57:13,120 | INFO     | current chi2=1.1170453479318334 (change=43.68695886560094 %)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | sum of square deviations: 241429643.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | sum of deviations: 10443402458.999998
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | mean x: 1773118816.5
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | mean y: 2304682.9782608696
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | intersect: -76696617529.88052
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | chi2: 1.118946626941912
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | current chi2=1.118946626941912 (change=-0.17020607208101912 %)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | right removable region: 91
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | sum of square deviations: 282974608.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | sum of deviations: -4710382424.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | mean x: 1773119274.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | mean y: 2319182.1958762887
[2026-03-10 06:57:58] 2026-03-10 05:57:13,121 | INFO     | intersect: 29517581780.970253
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | chi2: 0.9028388978969559
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | current chi2=0.9028388978969559 (change=54.485640095867126 %)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | sum of square deviations: 241429643.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | sum of deviations: -4777006441.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | mean x: 1773119426.5
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | mean y: 2319415.6739130435
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | intersect: 35085844436.88569
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | chi2: 0.9042577045601927
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | current chi2=0.9042577045601927 (change=-0.1571494833177565 %)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | left removable region: 20
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | sum of square deviations: 110960220.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | sum of deviations: 607968150.9999999
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | mean x: 1773119396.0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | mean y: 2344215.6338028167
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | intersect: -9712850299.016191
[2026-03-10 06:57:58] 2026-03-10 05:57:13,122 | INFO     | chi2: 3.647032127256514e-05
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | current memory leak: 5.48 B/s (using 71 data points, chi2=0.00)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | could have reported an average CPU frequency of 3667 MHz (7 samples)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | ..............................
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . Timing measurements:
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . get job = 0 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . initial setup = 4 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . payload setup = 4 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . stage-in = 0 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . payload execution = 6186 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . stage-out = 0 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | . log creation = 0 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,123 | INFO     | ..............................
[2026-03-10 06:57:58] 2026-03-10 05:57:13,171 | INFO     | 
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | job summary report
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | --------------------------------------------------
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | PanDA job id: 7047771292
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | task id: 48998022
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | errors: (none)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | pilot state: finished 
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | transexitcode: 0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | exeerrorcode: 0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | exeerrordiag: 
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | exitcode: 0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | exitmsg: OK
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | cpuconsumptiontime: 23974 s
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | nevents: 400
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | neventsw: 0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | pid: 3252665
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | pgrp: 3252665
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | corecount: 4
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | event service: False
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | sizes: {0: 2280037, 1: 2280299, 11: 2280327, 6194: 2307194, 6196: 2316216, 6198: 2316272, 6201: 2316594}
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | --------------------------------------------------
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | 
[2026-03-10 06:57:58] 2026-03-10 05:57:13,172 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | job 7047771292 has completed (purged errors)
[2026-03-10 06:57:58] 2026-03-10 05:57:13,192 | INFO     | overall cleanup function is called
[2026-03-10 06:57:58] 2026-03-10 05:57:13,671 | INFO     | PID=3246930 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 06:57:58] 2026-03-10 05:57:13,671 | INFO     | .. there are 54 such processes running
[2026-03-10 06:57:58] 2026-03-10 05:57:14,199 | INFO     | --- collectZombieJob: --- 10, [3252665]
[2026-03-10 06:57:58] 2026-03-10 05:57:14,199 | INFO     | zombie collector waiting for pid 3252665
[2026-03-10 06:57:58] 2026-03-10 05:57:14,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 06:57:58] 2026-03-10 05:57:14,199 | INFO     | collected zombie processes
[2026-03-10 06:57:58] 2026-03-10 05:57:14,199 | INFO     | will attempt to kill all subprocesses of pid=3252665
[2026-03-10 06:57:58] 2026-03-10 05:57:14,602 | INFO     | process IDs to be killed: [3252665] (in reverse order)
[2026-03-10 06:57:58] 2026-03-10 05:57:14,779 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 06:57:58] 2026-03-10 05:57:14,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 06:57:58] 2026-03-10 05:57:14,805 | INFO     | did not find any defunct processes belonging to 3252665
[2026-03-10 06:57:58] 2026-03-10 05:57:14,829 | INFO     | did not find any defunct processes belonging to 3252665
[2026-03-10 06:57:58] 2026-03-10 05:57:14,829 | INFO     | ready for new job
[2026-03-10 06:57:58] 2026-03-10 05:57:14,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 06:57:58] 2026-03-10 05:57:14,831 | INFO     | **************************************
[2026-03-10 06:57:58] 2026-03-10 05:57:14,831 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 06:57:58] 2026-03-10 05:57:14,831 | INFO     | **************************************
[2026-03-10 06:57:58] 2026-03-10 05:57:14,831 | INFO     | 
[2026-03-10 06:57:58] 2026-03-10 05:57:14,837 | INFO     | architecture information:
[2026-03-10 06:57:58] 2026-03-10 05:57:14,837 | INFO     | executing command: cat /etc/os-release
[2026-03-10 06:57:58] 2026-03-10 05:57:14,851 | INFO     | cat /etc/os-release:
[2026-03-10 06:57:58] NAME="CentOS Linux"
[2026-03-10 06:57:58] VERSION="7 (Core)"
[2026-03-10 06:57:58] ID="centos"
[2026-03-10 06:57:58] ID_LIKE="rhel fedora"
[2026-03-10 06:57:58] VERSION_ID="7"
[2026-03-10 06:57:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 06:57:58] ANSI_COLOR="0;31"
[2026-03-10 06:57:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 06:57:58] HOME_URL="https://www.centos.org/"
[2026-03-10 06:57:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 06:57:58] 
[2026-03-10 06:57:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 06:57:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 06:57:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 06:57:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 06:57:58] 
[2026-03-10 06:57:58] 2026-03-10 05:57:14,851 | INFO     | **************************************
[2026-03-10 06:57:58] 2026-03-10 05:57:15,353 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-10 06:57:58] 2026-03-10 05:57:15,369 | INFO     | sufficient remaining disk space (20469252096 B)
[2026-03-10 06:57:58] 2026-03-10 05:57:15,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 06:57:58] 2026-03-10 05:57:15,370 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 06:57:58] 2026-03-10 05:57:15,370 | INFO     | update_server=False
[2026-03-10 06:57:58] 2026-03-10 05:57:15,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 06:57:58] 2026-03-10 05:57:15,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:57:58] 2026-03-10 05:57:15,370 | INFO     | aborting loop
[2026-03-10 06:57:58] 2026-03-10 05:57:15,512 | INFO     | all data control threads have been joined
[2026-03-10 06:57:58] 2026-03-10 05:57:16,128 | INFO     | all job control threads have been joined
[2026-03-10 06:57:58] 2026-03-10 05:57:16,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 06:57:58] 2026-03-10 05:57:16,219 | INFO     | all payload control threads have been joined
[2026-03-10 06:57:58] 2026-03-10 05:57:16,375 | INFO     | [job] retrieve thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,375 | INFO     | [job] job monitor thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,416 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 06:57:58] 2026-03-10 05:57:16,517 | INFO     | [data] control thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,548 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,583 | INFO     | [job] validate thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,896 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:16,945 | INFO     | [data] copytool_in thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:17,065 | INFO     | [payload] validate_post thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:17,065 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:17,086 | INFO     | [payload] failed_post thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:17,133 | INFO     | [job] control thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:17,224 | INFO     | [payload] control thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:18,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 06:57:58] 2026-03-10 05:57:18,485 | INFO     | [data] copytool_out thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:19,187 | INFO     | [job] queue monitor thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:20,162 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 06:57:58] 2026-03-10 05:57:46,153 | INFO     | PID=3246930 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 06:57:58] 2026-03-10 05:57:46,153 | INFO     | .. there are 54 such processes running
[2026-03-10 06:57:58] 2026-03-10 05:57:46,154 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 06:57:58] 2026-03-10 05:57:46,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 06:57:58] 2026-03-10 05:57:46,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 06:57:58] 2026-03-10 05:57:51,102 | INFO     | [monitor] cgroup control has ended
[2026-03-10 06:57:58] 2026-03-10 05:57:53,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22651875247936)>', '<ExcThread(monitor, started 22651635771136)>']
[2026-03-10 06:57:58] 2026-03-10 05:57:54,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 06:57:58] 2026-03-10 05:57:54,194 | INFO     | [monitor] control thread has ended
[2026-03-10 06:57:58] 2026-03-10 05:57:58,230 | INFO     | all workflow threads have been joined
[2026-03-10 06:57:58] 2026-03-10 05:57:58,231 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 06:57:58] 2026-03-10 05:57:58,231 | INFO     | traces error code: 0
[2026-03-10 06:57:58] 2026-03-10 05:57:58,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 06:57:58] 2026-03-10 05:57:58,406 [wrapper] ==== pilot stdout END ====
[2026-03-10 06:57:58] 2026-03-10 05:57:58,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 06:57:58] 2026-03-10 05:57:58,410 [wrapper] pilotpid: 3246930
[2026-03-10 06:57:58] 2026-03-10 05:57:58,412 [wrapper] Pilot exit status: 0
[2026-03-10 06:57:58] 2026-03-10 05:57:58,422 [wrapper] pandaids: 7047771292
[2026-03-10 06:57:58] 2026-03-10 05:57:58,530 [wrapper] cleanup supervisor_pilot  118647 3246931
[2026-03-10 06:57:58] 2026-03-10 05:57:58,533 [wrapper] Test setup, not cleaning
[2026-03-10 06:57:58] 2026-03-10 05:57:58,535 [wrapper] apfmon messages muted
[2026-03-10 06:57:58] 2026-03-10 05:57:58,537 [wrapper] ==== wrapper stdout END ====
[2026-03-10 06:57:58] 2026-03-10 05:57:58,538 [wrapper] ==== wrapper stderr END ====
[2026-03-10 06:57:58]  *** Error codes and diagnostics ***
[2026-03-10 06:57:58]     "exeErrorCode": 0,
[2026-03-10 06:57:58]     "exeErrorDiag": "",
[2026-03-10 06:57:58]     "pilotErrorCode": 0,
[2026-03-10 06:57:58]     "pilotErrorDiag": "",
[2026-03-10 06:57:58]  *** Listing of results directory ***
[2026-03-10 06:57:58] total 557052
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc    584627 Mar  9 22:23 pilot3.tar.gz
[2026-03-10 06:57:58] -rwx------. 1 boinc boinc     36322 Mar  9 22:27 runpilot2-wrapper.sh
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc      5111 Mar  9 22:28 queuedata.json
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc       100 Mar 10 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 06:57:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 05:13 run_atlas
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc       105 Mar 10 05:13 job.xml
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc      6708 Mar 10 05:13 init_data.xml
[2026-03-10 06:57:58] -rw-r--r--. 2 boinc boinc 326517653 Mar 10 05:13 EVNT.48998020._000086.pool.root.1
[2026-03-10 06:57:58] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:13 start_atlas.sh
[2026-03-10 06:57:58] drwxrwx--x. 2 boinc boinc      4096 Mar 10 05:13 shared
[2026-03-10 06:57:58] -rw-r--r--. 2 boinc boinc    597969 Mar 10 05:13 input.tar.gz
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc         0 Mar 10 05:13 boinc_lockfile
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc      2611 Mar 10 05:13 pandaJob.out
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc   1006495 Mar 10 05:13 agis_schedconf.cvmfs.json
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc   1511578 Mar 10 05:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc       440 Mar 10 05:13 workernode_map.json
[2026-03-10 06:57:58] drwx------. 5 boinc boinc      4096 Mar 10 05:13 pilot3
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc 237585226 Mar 10 06:56 HITS.48998022._002168.pool.root.1
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc       529 Mar 10 06:56 boinc_task_state.xml
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc        95 Mar 10 06:56 pilot_heartbeat.json
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc      1032 Mar 10 06:57 memory_monitor_summary.json
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc    284907 Mar 10 06:57 log.48998022._002168.job.log.tgz.1
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc      6345 Mar 10 06:57 heartbeat.json
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc      8192 Mar 10 06:57 boinc_mmap_file
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc        27 Mar 10 06:57 wrapper_checkpoint.txt
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc      4830 Mar 10 06:57 pilotlog.txt
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc    903141 Mar 10 06:57 log.48998022._002168.job.log.1
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc       357 Mar 10 06:57 output.list
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc       620 Mar 10 06:57 runtime_log
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc   1208320 Mar 10 06:57 result.tar.gz
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc      9221 Mar 10 06:57 runtime_log.err
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc       662 Mar 10 06:57 FkBODmoJxJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGIbLDmb31Jkm.diag
[2026-03-10 06:57:58] -rw-r--r--. 1 boinc boinc     20998 Mar 10 06:57 stderr.txt
[2026-03-10 06:57:58] HITS file was successfully produced:
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc 237585226 Mar 10 06:56 shared/HITS.pool.root.1
[2026-03-10 06:57:58]  *** Contents of shared directory: ***
[2026-03-10 06:57:58] total 552676
[2026-03-10 06:57:58] -rw-r--r--. 2 boinc boinc 326517653 Mar 10 05:13 ATLAS.root_0
[2026-03-10 06:57:58] -rw-r--r--. 2 boinc boinc     15845 Mar 10 05:13 start_atlas.sh
[2026-03-10 06:57:58] -rw-r--r--. 2 boinc boinc    597969 Mar 10 05:13 input.tar.gz
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc 237585226 Mar 10 06:56 HITS.pool.root.1
[2026-03-10 06:57:58] -rw-------. 1 boinc boinc   1208320 Mar 10 06:57 result.tar.gz
06:58:00 (3242419): run_atlas exited; CPU time 24223.807416
06:58:00 (3242419): called boinc_finish(0)

</stderr_txt>
]]>

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