Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:48 (3403): wrapper (7.7.26015): starting
08:29:48 (3403): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 08:29:48] Arguments: --nthreads 8
[2026-03-10 08:29:48] Threads: 8
[2026-03-10 08:29:48] Checking for CVMFS
[2026-03-10 08:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 08:29:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 08:29:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 08:29:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 08:29:51] 2.11.2.0 18312 121515 113752 157107 1 54 16689492 25165824 899 130560 161 36016810 99.829 28318134 1003 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-10 08:29:51] CVMFS is ok
[2026-03-10 08:29:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 08:29:51] Checking for apptainer binary...
[2026-03-10 08:29:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 08:29:51] Running /usr/bin/apptainer --version
[2026-03-10 08:29:51] apptainer version 1.3.2-1.el7
[2026-03-10 08:29:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 08:29:54] cg-vwn442.simple-grid.lan
[2026-03-10 08:29:54] apptainer works
[2026-03-10 08:29:54] Set ATHENA_PROC_NUMBER=8
[2026-03-10 08:29:54] Set ATHENA_CORE_NUMBER=8
[2026-03-10 08:29:54] Starting ATLAS job with PandaID=7040354057
[2026-03-10 08:29:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 12:28:34]  *** The last 200 lines of the pilot log: ***
[2026-03-10 12:28:34] 2026-03-10 11:27:42,769 | INFO     | total number of processed events: 400 (read)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,771 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7040354057/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,772 | INFO     | extracted standard info from prmon json
[2026-03-10 12:28:34] 2026-03-10 11:27:42,772 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 12:28:34] 2026-03-10 11:27:42,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 12:28:34] 2026-03-10 11:27:42,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 12:28:34] 2026-03-10 11:27:42,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 12:28:34] 2026-03-10 11:27:42,777 | INFO     | fitting pss+swap vs Time
[2026-03-10 12:28:34] 2026-03-10 11:27:42,778 | INFO     | sum of square deviations: 3392567795.5
[2026-03-10 12:28:34] 2026-03-10 11:27:42,780 | INFO     | sum of deviations: 96712659718.00002
[2026-03-10 12:28:34] 2026-03-10 11:27:42,780 | INFO     | mean x: 1773135253.5
[2026-03-10 12:28:34] 2026-03-10 11:27:42,780 | INFO     | mean y: 2434041.4594594594
[2026-03-10 12:28:34] 2026-03-10 11:27:42,781 | INFO     | intersect: -50544713942.78934
[2026-03-10 12:28:34] 2026-03-10 11:27:42,781 | INFO     | chi2: 8.162076119595765
[2026-03-10 12:28:34] 2026-03-10 11:27:42,781 | INFO     | sum of square deviations: 3168461268.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,783 | INFO     | sum of deviations: 109227028037.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,783 | INFO     | mean x: 1773135101.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,784 | INFO     | mean y: 2442373.350230415
[2026-03-10 12:28:34] 2026-03-10 11:27:42,784 | INFO     | intersect: -61123214849.08038
[2026-03-10 12:28:34] 2026-03-10 11:27:42,784 | INFO     | chi2: 7.467810582323806
[2026-03-10 12:28:34] 2026-03-10 11:27:42,784 | INFO     | current chi2=7.467810582323806 (change=8.505991944931079 %)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,785 | INFO     | right removable region: 216
[2026-03-10 12:28:34] 2026-03-10 11:27:42,785 | INFO     | sum of square deviations: 3168461268.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,787 | INFO     | sum of deviations: 19368673457.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,787 | INFO     | mean x: 1773135406.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,787 | INFO     | mean y: 2486637.400921659
[2026-03-10 12:28:34] 2026-03-10 11:27:42,787 | INFO     | intersect: -10836617195.336578
[2026-03-10 12:28:34] 2026-03-10 11:27:42,788 | INFO     | chi2: 3.1003016438797735
[2026-03-10 12:28:34] 2026-03-10 11:27:42,788 | INFO     | current chi2=3.1003016438797735 (change=62.01577149670936 %)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,788 | INFO     | sum of square deviations: 2954447953.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,790 | INFO     | sum of deviations: -30108563487.999992
[2026-03-10 12:28:34] 2026-03-10 11:27:42,790 | INFO     | mean x: 1773135558.5
[2026-03-10 12:28:34] 2026-03-10 11:27:42,790 | INFO     | mean y: 2521754.7075471696
[2026-03-10 12:28:34] 2026-03-10 11:27:42,791 | INFO     | intersect: 18072416836.703453
[2026-03-10 12:28:34] 2026-03-10 11:27:42,791 | INFO     | chi2: 0.9749575094225205
[2026-03-10 12:28:34] 2026-03-10 11:27:42,791 | INFO     | current chi2=0.9749575094225205 (change=68.55281771220038 %)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,792 | INFO     | sum of square deviations: 2750295288.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,793 | INFO     | sum of deviations: -34957304831.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,793 | INFO     | mean x: 1773135711.0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,794 | INFO     | mean y: 2525315.7101449277
[2026-03-10 12:28:34] 2026-03-10 11:27:42,794 | INFO     | intersect: 22539758254.51701
[2026-03-10 12:28:34] 2026-03-10 11:27:42,794 | INFO     | chi2: 0.9140608578769944
[2026-03-10 12:28:34] 2026-03-10 11:27:42,794 | INFO     | current chi2=0.9140608578769944 (change=6.246082619702666 %)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,794 | INFO     | left removable region: 30
[2026-03-10 12:28:34] 2026-03-10 11:27:42,795 | INFO     | sum of square deviations: 1995283922.5
[2026-03-10 12:28:34] 2026-03-10 11:27:42,796 | INFO     | sum of deviations: -878106864.4999999
[2026-03-10 12:28:34] 2026-03-10 11:27:42,797 | INFO     | mean x: 1773135985.5
[2026-03-10 12:28:34] 2026-03-10 11:27:42,797 | INFO     | mean y: 2519526.2634408604
[2026-03-10 12:28:34] 2026-03-10 11:27:42,797 | INFO     | intersect: 782861042.075721
[2026-03-10 12:28:34] 2026-03-10 11:27:42,797 | INFO     | chi2: 0.03455343043525601
[2026-03-10 12:28:34] 2026-03-10 11:27:42,797 | INFO     | current memory leak: -0.44 B/s (using 186 data points, chi2=0.03)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,798 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,798 | INFO     | ..............................
[2026-03-10 12:28:34] 2026-03-10 11:27:42,798 | INFO     | . Timing measurements:
[2026-03-10 12:28:34] 2026-03-10 11:27:42,798 | INFO     | . get job = 0 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | . initial setup = 119 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | . payload setup = 150 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | . stage-in = 0 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | . payload execution = 13669 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | . stage-out = 3 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | . log creation = 1 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,799 | INFO     | ..............................
[2026-03-10 12:28:34] 2026-03-10 11:27:42,918 | INFO     | 
[2026-03-10 12:28:34] 2026-03-10 11:27:42,918 | INFO     | job summary report
[2026-03-10 12:28:34] 2026-03-10 11:27:42,918 | INFO     | --------------------------------------------------
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | PanDA job id: 7040354057
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | task id: 48973281
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | errors: (none)
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | pilot state: finished 
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | transexitcode: 0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | exeerrorcode: 0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | exeerrordiag: 
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | exitcode: 0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,919 | INFO     | exitmsg: OK
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | cpuconsumptiontime: 62436 s
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | nevents: 400
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | neventsw: 0
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | pid: 11819
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | pgrp: 11819
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | corecount: 8
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | event service: False
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | sizes: {0: 2279836, 1: 2280297, 12: 2280297, 13823: 2310651, 13827: 2319649, 13830: 2320027}
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | --------------------------------------------------
[2026-03-10 12:28:34] 2026-03-10 11:27:42,920 | INFO     | 
[2026-03-10 12:28:34] 2026-03-10 11:27:42,921 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-10 12:28:34] 2026-03-10 11:27:43,170 | INFO     | PID=7392 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-10 12:28:34] 2026-03-10 11:27:43,170 | INFO     | .. there are 2 such processes running
[2026-03-10 12:28:34] 2026-03-10 11:27:43,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 12:28:34] 2026-03-10 11:27:43,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 12:28:34] 2026-03-10 11:27:43,545 | INFO     | job 7040354057 has completed (purged errors)
[2026-03-10 12:28:34] 2026-03-10 11:27:43,545 | INFO     | overall cleanup function is called
[2026-03-10 12:28:34] 2026-03-10 11:27:44,562 | INFO     | --- collectZombieJob: --- 10, [11819]
[2026-03-10 12:28:34] 2026-03-10 11:27:44,562 | INFO     | zombie collector waiting for pid 11819
[2026-03-10 12:28:34] 2026-03-10 11:27:44,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 12:28:34] 2026-03-10 11:27:44,563 | INFO     | collected zombie processes
[2026-03-10 12:28:34] 2026-03-10 11:27:44,563 | INFO     | will attempt to kill all subprocesses of pid=11819
[2026-03-10 12:28:34] 2026-03-10 11:27:44,644 | INFO     | process IDs to be killed: [11819] (in reverse order)
[2026-03-10 12:28:34] 2026-03-10 11:27:45,568 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 12:28:34] 2026-03-10 11:27:45,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 12:28:34] 2026-03-10 11:27:45,570 | INFO     | did not find any defunct processes belonging to 11819
[2026-03-10 12:28:34] 2026-03-10 11:27:45,572 | INFO     | did not find any defunct processes belonging to 11819
[2026-03-10 12:28:34] 2026-03-10 11:27:45,572 | INFO     | ready for new job
[2026-03-10 12:28:34] 2026-03-10 11:27:45,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 12:28:34] 2026-03-10 11:27:45,574 | INFO     | **************************************
[2026-03-10 12:28:34] 2026-03-10 11:27:45,575 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 12:28:34] 2026-03-10 11:27:45,575 | INFO     | **************************************
[2026-03-10 12:28:34] 2026-03-10 11:27:45,575 | INFO     | 
[2026-03-10 12:28:34] 2026-03-10 11:27:45,575 | INFO     | pilot is running in a VM
[2026-03-10 12:28:34] 2026-03-10 11:27:45,575 | INFO     | architecture information:
[2026-03-10 12:28:34] 2026-03-10 11:27:45,583 | INFO     | executing command: cat /etc/os-release
[2026-03-10 12:28:34] 2026-03-10 11:27:45,891 | INFO     | cat /etc/os-release:
[2026-03-10 12:28:34] NAME="CentOS Linux"
[2026-03-10 12:28:34] VERSION="7 (Core)"
[2026-03-10 12:28:34] ID="centos"
[2026-03-10 12:28:34] ID_LIKE="rhel fedora"
[2026-03-10 12:28:34] VERSION_ID="7"
[2026-03-10 12:28:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 12:28:34] ANSI_COLOR="0;31"
[2026-03-10 12:28:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 12:28:34] HOME_URL="https://www.centos.org/"
[2026-03-10 12:28:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 12:28:34] 
[2026-03-10 12:28:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 12:28:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 12:28:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 12:28:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 12:28:34] 
[2026-03-10 12:28:34] 2026-03-10 11:27:45,892 | INFO     | **************************************
[2026-03-10 12:28:34] 2026-03-10 11:27:46,395 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-10 12:28:34] 2026-03-10 11:27:46,674 | INFO     | sufficient remaining disk space (496786997248 B)
[2026-03-10 12:28:34] 2026-03-10 11:27:46,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 12:28:34] 2026-03-10 11:27:46,674 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 12:28:34] 2026-03-10 11:27:46,674 | INFO     | update_server=False
[2026-03-10 12:28:34] 2026-03-10 11:27:46,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 12:28:34] 2026-03-10 11:27:46,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:28:34] 2026-03-10 11:27:46,676 | INFO     | aborting loop
[2026-03-10 12:28:34] 2026-03-10 11:27:46,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 12:28:34] 2026-03-10 11:27:46,791 | INFO     | all job control threads have been joined
[2026-03-10 12:28:34] 2026-03-10 11:27:47,200 | INFO     | all payload control threads have been joined
[2026-03-10 12:28:34] 2026-03-10 11:27:47,680 | INFO     | [job] retrieve thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:47,682 | INFO     | [job] job monitor thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:47,779 | INFO     | all data control threads have been joined
[2026-03-10 12:28:34] 2026-03-10 11:27:47,797 | INFO     | [job] control thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:47,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:28:34] 2026-03-10 11:27:47,966 | INFO     | [job] validate thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:47,967 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:47,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,029 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,206 | INFO     | [payload] control thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,332 | INFO     | [data] copytool_in thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,563 | INFO     | [payload] failed_post thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 12:28:34] 2026-03-10 11:27:48,683 | INFO     | [data] copytool_out thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,785 | INFO     | [data] control thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,788 | INFO     | [payload] validate_post thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,900 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:48,940 | INFO     | [job] queue monitor thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:27:52,655 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 12:28:34] 2026-03-10 11:28:15,328 | INFO     | PID=7392 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-10 12:28:34] 2026-03-10 11:28:15,328 | INFO     | .. there are 2 such processes running
[2026-03-10 12:28:34] 2026-03-10 11:28:15,328 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 12:28:34] 2026-03-10 11:28:15,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 12:28:34] 2026-03-10 11:28:15,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 12:28:34] 2026-03-10 11:28:23,255 | INFO     | [monitor] cgroup control has ended
[2026-03-10 12:28:34] 2026-03-10 11:28:24,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458772629312)>', '<ExcThread(monitor, started 140457963149056)>']
[2026-03-10 12:28:34] 2026-03-10 11:28:24,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 12:28:34] 2026-03-10 11:28:24,383 | INFO     | [monitor] control thread has ended
[2026-03-10 12:28:34] 2026-03-10 11:28:29,104 | INFO     | all workflow threads have been joined
[2026-03-10 12:28:34] 2026-03-10 11:28:29,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 12:28:34] 2026-03-10 11:28:29,105 | INFO     | traces error code: 0
[2026-03-10 12:28:34] 2026-03-10 11:28:29,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 12:28:34] 2026-03-10 11:28:29,543 [wrapper] ==== pilot stdout END ====
[2026-03-10 12:28:34] 2026-03-10 11:28:29,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 12:28:34] 2026-03-10 11:28:29,755 [wrapper] pilotpid: 7392
[2026-03-10 12:28:34] 2026-03-10 11:28:29,850 [wrapper] Pilot exit status: 0
[2026-03-10 12:28:34] 2026-03-10 11:28:30,367 [wrapper] pandaids: 7040354057
[2026-03-10 12:28:34] 2026-03-10 11:28:31,356 [wrapper] cleanup supervisor_pilot  1001 7393
[2026-03-10 12:28:34] 2026-03-10 11:28:31,461 [wrapper] Test setup, not cleaning
[2026-03-10 12:28:34] 2026-03-10 11:28:31,545 [wrapper] apfmon messages muted
[2026-03-10 12:28:34] 2026-03-10 11:28:31,666 [wrapper] ==== wrapper stdout END ====
[2026-03-10 12:28:34] 2026-03-10 11:28:31,736 [wrapper] ==== wrapper stderr END ====
[2026-03-10 12:28:34]  *** Error codes and diagnostics ***
[2026-03-10 12:28:34]     "exeErrorCode": 0,
[2026-03-10 12:28:34]     "exeErrorDiag": "",
[2026-03-10 12:28:34]     "pilotErrorCode": 0,
[2026-03-10 12:28:34]     "pilotErrorDiag": "",
[2026-03-10 12:28:34]  *** Listing of results directory ***
[2026-03-10 12:28:34] total 503196
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc    584627 Mar  4 17:22 pilot3.tar.gz
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc      5111 Mar  4 17:49 queuedata.json
[2026-03-10 12:28:34] -rwx------. 1 boinc boinc     36322 Mar  4 17:53 runpilot2-wrapper.sh
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc       100 Mar 10 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 12:28:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 08:29 run_atlas
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc       105 Mar 10 08:29 job.xml
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc      6392 Mar 10 08:29 init_data.xml
[2026-03-10 12:28:34] -rw-r--r--. 2 boinc boinc 295203987 Mar 10 08:29 EVNT.48716896._000030.pool.root.1
[2026-03-10 12:28:34] -rw-r--r--. 2 boinc boinc     15845 Mar 10 08:29 start_atlas.sh
[2026-03-10 12:28:34] drwxrwx--x. 2 boinc boinc        68 Mar 10 08:29 shared
[2026-03-10 12:28:34] -rw-r--r--. 2 boinc boinc    597962 Mar 10 08:29 input.tar.gz
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc         0 Mar 10 08:29 boinc_lockfile
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc      2595 Mar 10 08:29 pandaJob.out
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc       415 Mar 10 08:36 workernode_map.json
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc   1005057 Mar 10 08:37 agis_schedconf.cvmfs.json
[2026-03-10 12:28:34] drwx------. 5 boinc boinc      4096 Mar 10 08:37 pilot3
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc 211309527 Mar 10 12:26 HITS.48973281._000749.pool.root.1
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc       530 Mar 10 12:26 boinc_task_state.xml
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc        95 Mar 10 12:27 pilot_heartbeat.json
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc      1020 Mar 10 12:27 memory_monitor_summary.json
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc   1511578 Mar 10 12:27 agis_ddmendpoints.agis.ALL.json
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc    468407 Mar 10 12:27 log.48973281._000749.job.log.tgz.1
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc      6321 Mar 10 12:27 heartbeat.json
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc      8192 Mar 10 12:28 boinc_mmap_file
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc        28 Mar 10 12:28 wrapper_checkpoint.txt
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc      4879 Mar 10 12:28 pilotlog.txt
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc   1949009 Mar 10 12:28 log.48973281._000749.job.log.1
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc       357 Mar 10 12:28 output.list
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc       620 Mar 10 12:28 runtime_log
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc   2437120 Mar 10 12:28 result.tar.gz
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc      8816 Mar 10 12:28 runtime_log.err
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc       655 Mar 10 12:28 7W5MDmBe4H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmk5KLDmADU2bm.diag
[2026-03-10 12:28:34] -rw-r--r--. 1 boinc boinc     20779 Mar 10 12:28 stderr.txt
[2026-03-10 12:28:34] HITS file was successfully produced:
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc 211309527 Mar 10 12:26 shared/HITS.pool.root.1
[2026-03-10 12:28:34]  *** Contents of shared directory: ***
[2026-03-10 12:28:34] total 497628
[2026-03-10 12:28:34] -rw-r--r--. 2 boinc boinc 295203987 Mar 10 08:29 ATLAS.root_0
[2026-03-10 12:28:34] -rw-r--r--. 2 boinc boinc     15845 Mar 10 08:29 start_atlas.sh
[2026-03-10 12:28:34] -rw-r--r--. 2 boinc boinc    597962 Mar 10 08:29 input.tar.gz
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc 211309527 Mar 10 12:26 HITS.pool.root.1
[2026-03-10 12:28:34] -rw-------. 1 boinc boinc   2437120 Mar 10 12:28 result.tar.gz
12:28:35 (3403): run_atlas exited; CPU time 62578.255593
12:28:35 (3403): called boinc_finish(0)

</stderr_txt>
]]>

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