Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:45:21 (3322807): wrapper (7.7.26015): starting
17:45:21 (3322807): wrapper: running run_atlas (--nthreads 11)
[2026-03-09 17:45:21] Arguments: --nthreads 11
[2026-03-09 17:45:21] Threads: 11
[2026-03-09 17:45:21] Checking for CVMFS
[2026-03-09 17:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 17:45:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 17:45:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 17:45:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 17:45:23] 2.13.3.0 17216 178791 876412 157090 0 791 32890623 32935936 69371 16776704 0 2393423259 99.657 2197166081 48451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 17:45:23] CVMFS is ok
[2026-03-09 17:45:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 17:45:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 17:45:23] Further information can be found at the LHC@home message board.
[2026-03-09 17:45:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 17:45:23] Checking for apptainer binary...
[2026-03-09 17:45:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 17:45:23] Running /usr/bin/apptainer --version
[2026-03-09 17:45:23] apptainer version 1.4.5-2.el9
[2026-03-09 17:45:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 17:45:23] c7-9-14.aglt2.org
[2026-03-09 17:45:23] apptainer works
[2026-03-09 17:45:23] Set ATHENA_PROC_NUMBER=11
[2026-03-09 17:45:23] Set ATHENA_CORE_NUMBER=11
[2026-03-09 17:45:23] Starting ATLAS job with PandaID=7040898175
[2026-03-09 17:45:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:12:12]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:12:13]  mtime=0
[2026-03-09 19:12:13]  protocol_id=None
[2026-03-09 19:12:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-09 19:12:13]  replicas=None
[2026-03-09 19:12:13]  scope=mc23_13p6TeV
[2026-03-09 19:12:13]  status=None
[2026-03-09 19:12:13]  status_code=0
[2026-03-09 19:12:13]  storage_token=
[2026-03-09 19:12:13]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-7040898175/log.48955010._018843.job.log.tgz.1
[2026-03-09 19:12:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/8d/log.48955010._018843.job.log.tgz.1
[2026-03-09 19:12:13]  workdir=None
[2026-03-09 19:12:13] ]
[2026-03-09 19:12:13] 2026-03-09 23:11:24,161 | INFO     | transferring file log.48955010._018843.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-7040898175/log.48955010._018843.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-09 19:12:13] 2026-03-09 23:11:24,162 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-7040898175/log.48955010._018843.job.log.tgz.1 /tmp/boinchome/slots/5/log.48955010._018843.job
[2026-03-09 19:12:13] 2026-03-09 23:11:24,460 | INFO     | adding to output.list: log.48955010._018843.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/8d/log.48955010._018843.job.log.tg
[2026-03-09 19:12:13] 2026-03-09 23:11:24,461 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-09 19:12:13] 2026-03-09 23:11:24,461 | INFO     | summary of transferred files:
[2026-03-09 19:12:13] 2026-03-09 23:11:24,461 | INFO     |  -- lfn=log.48955010._018843.job.log.tgz.1, status_code=0, status=transferred
[2026-03-09 19:12:13] 2026-03-09 23:11:24,461 | INFO     | stage-out finished correctly
[2026-03-09 19:12:13] 2026-03-09 23:11:26,060 | INFO     | time since job start (5070s) is within the limit (349056.0s)
[2026-03-09 19:12:13] 2026-03-09 23:11:26,061 | INFO     | 5102s have passed since pilot start - server update state is 'RUNNING'
[2026-03-09 19:12:13] 2026-03-09 23:11:26,116 | INFO     | monitor loop #323: job 0:7040898175 is in state 'finished'
[2026-03-09 19:12:13] 2026-03-09 23:11:26,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 19:12:13] 2026-03-09 23:11:27,567 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-09 19:12:13] 2026-03-09 23:11:28,068 | INFO     | time since job start (5072s) is within the limit (349056.0s)
[2026-03-09 19:12:13] 2026-03-09 23:11:28,649 | INFO     | monitor loop #324: job 0:7040898175 is in state 'finished'
[2026-03-09 19:12:13] 2026-03-09 23:11:28,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,071 | INFO     | job 7040898175 has state=finished
[2026-03-09 19:12:13] 2026-03-09 23:11:30,071 | INFO     | preparing for final server update for job 7040898175 in state='finished'
[2026-03-09 19:12:13] 2026-03-09 23:11:30,101 | INFO     | time since job start (5074s) is within the limit (349056.0s)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,173 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,188 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7040898175/jobReport.json
[2026-03-09 19:12:13] 2026-03-09 23:11:30,189 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-03-09 19:12:13] 2026-03-09 23:11:30,189 | INFO     | this job has now completed (state=finished)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,189 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,189 | INFO     | log transfer has been attempted: DONE
[2026-03-09 19:12:13] 2026-03-09 23:11:30,189 | INFO     | job 7040898175 has finished - writing final server update
[2026-03-09 19:12:13] 2026-03-09 23:11:30,190 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,257 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7040898175/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,258 | INFO     | extracted standard info from prmon json
[2026-03-09 19:12:13] 2026-03-09 23:11:30,258 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:12:13] 2026-03-09 23:11:30,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:12:13] 2026-03-09 23:11:30,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:12:13] 2026-03-09 23:11:30,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:12:13] 2026-03-09 23:11:30,259 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:12:13] 2026-03-09 23:11:30,259 | INFO     | sum of square deviations: 130787181.52000009
[2026-03-09 19:12:13] 2026-03-09 23:11:30,260 | INFO     | sum of deviations: 1123836658.7199998
[2026-03-09 19:12:13] 2026-03-09 23:11:30,260 | INFO     | mean x: 1773095466.08
[2026-03-09 19:12:13] 2026-03-09 23:11:30,260 | INFO     | mean y: 2643331.546666667
[2026-03-09 19:12:13] 2026-03-09 23:11:30,260 | INFO     | intersect: -15233327510.79622
[2026-03-09 19:12:13] 2026-03-09 23:11:30,260 | INFO     | chi2: 0.08866032950516425
[2026-03-09 19:12:13] 2026-03-09 23:11:30,260 | INFO     | current memory leak: 8.59 B/s (using 75 data points, chi2=0.09)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,266 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,266 | INFO     | ..............................
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . Timing measurements:
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . get job = 0 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . initial setup = 32 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . payload setup = 46 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . stage-in = 0 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . payload execution = 5012 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . stage-out = 2 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | . log creation = 0 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,267 | INFO     | ..............................
[2026-03-09 19:12:13] 2026-03-09 23:11:30,613 | INFO     | 
[2026-03-09 19:12:13] 2026-03-09 23:11:30,613 | INFO     | job summary report
[2026-03-09 19:12:13] 2026-03-09 23:11:30,613 | INFO     | --------------------------------------------------
[2026-03-09 19:12:13] 2026-03-09 23:11:30,613 | INFO     | PanDA job id: 7040898175
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | task id: 48955010
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | errors: (none)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | pilot state: finished 
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | transexitcode: 0
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | exeerrorcode: 0
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | exeerrordiag: 
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | exitcode: 0
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | exitmsg: OK
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | cpuconsumptiontime: 19335 s
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | nevents: 400
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | neventsw: 0
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | pid: 3366809
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | pgrp: 3366809
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | corecount: 11
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | event service: False
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | sizes: {0: 2279746, 1: 2280207, 5063: 2306468, 5067: 2315466, 5070: 2315522, 5072: 2315716}
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | --------------------------------------------------
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | 
[2026-03-09 19:12:13] 2026-03-09 23:11:30,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-09 19:12:13] 2026-03-09 23:11:30,681 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,683 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:12:13] 2026-03-09 23:11:30,683 | INFO     | job 7040898175 has completed (purged errors)
[2026-03-09 19:12:13] 2026-03-09 23:11:30,683 | INFO     | overall cleanup function is called
[2026-03-09 19:12:13] 2026-03-09 23:11:31,696 | INFO     | --- collectZombieJob: --- 10, [3366809]
[2026-03-09 19:12:13] 2026-03-09 23:11:31,696 | INFO     | zombie collector waiting for pid 3366809
[2026-03-09 19:12:13] 2026-03-09 23:11:31,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:12:13] 2026-03-09 23:11:31,697 | INFO     | collected zombie processes
[2026-03-09 19:12:13] 2026-03-09 23:11:31,697 | INFO     | will attempt to kill all subprocesses of pid=3366809
[2026-03-09 19:12:13] 2026-03-09 23:11:33,743 | INFO     | process IDs to be killed: [3366809] (in reverse order)
[2026-03-09 19:12:13] 2026-03-09 23:11:34,468 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:12:13] 2026-03-09 23:11:34,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:12:13] 2026-03-09 23:11:34,725 | INFO     | did not find any defunct processes belonging to 3366809
[2026-03-09 19:12:13] 2026-03-09 23:11:34,815 | INFO     | did not find any defunct processes belonging to 3366809
[2026-03-09 19:12:13] 2026-03-09 23:11:34,815 | INFO     | ready for new job
[2026-03-09 19:12:13] 2026-03-09 23:11:34,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:12:13] 2026-03-09 23:11:34,828 | INFO     | **************************************
[2026-03-09 19:12:13] 2026-03-09 23:11:34,828 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:12:13] 2026-03-09 23:11:34,828 | INFO     | **************************************
[2026-03-09 19:12:13] 2026-03-09 23:11:34,828 | INFO     | 
[2026-03-09 19:12:13] 2026-03-09 23:11:34,842 | INFO     | architecture information:
[2026-03-09 19:12:13] 2026-03-09 23:11:34,845 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:12:13] 2026-03-09 23:11:35,081 | INFO     | cat /etc/os-release:
[2026-03-09 19:12:13] NAME="CentOS Linux"
[2026-03-09 19:12:13] VERSION="7 (Core)"
[2026-03-09 19:12:13] ID="centos"
[2026-03-09 19:12:13] ID_LIKE="rhel fedora"
[2026-03-09 19:12:13] VERSION_ID="7"
[2026-03-09 19:12:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:12:13] ANSI_COLOR="0;31"
[2026-03-09 19:12:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:12:13] HOME_URL="https://www.centos.org/"
[2026-03-09 19:12:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:12:13] 
[2026-03-09 19:12:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:12:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:12:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:12:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:12:13] 
[2026-03-09 19:12:13] 2026-03-09 23:11:35,081 | INFO     | **************************************
[2026-03-09 19:12:13] 2026-03-09 23:11:35,584 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-09 19:12:13] 2026-03-09 23:11:35,841 | INFO     | sufficient remaining disk space (69562531840 B)
[2026-03-09 19:12:13] 2026-03-09 23:11:35,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:12:13] 2026-03-09 23:11:35,842 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:12:13] 2026-03-09 23:11:35,842 | INFO     | update_server=False
[2026-03-09 19:12:13] 2026-03-09 23:11:35,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:12:13] 2026-03-09 23:11:35,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:12:13] 2026-03-09 23:11:35,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:12:13] 2026-03-09 23:11:36,163 | INFO     | all job control threads have been joined
[2026-03-09 19:12:13] 2026-03-09 23:11:36,272 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 19:12:13] 2026-03-09 23:11:36,272 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 19:12:13] 2026-03-09 23:11:36,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:12:13] 2026-03-09 23:11:36,273 | INFO     | will abort loop
[2026-03-09 19:12:13] 2026-03-09 23:11:36,634 | INFO     | all data control threads have been joined
[2026-03-09 19:12:13] 2026-03-09 23:11:36,847 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:36,872 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,025 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,132 | INFO     | all payload control threads have been joined
[2026-03-09 19:12:13] 2026-03-09 23:11:37,169 | INFO     | [job] control thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,251 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,280 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,497 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,524 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,640 | INFO     | [data] control thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,873 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,874 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:37,892 | INFO     | [job] validate thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:38,142 | INFO     | [payload] control thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:38,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:12:13] 2026-03-09 23:11:38,221 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:38,226 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:11:42,225 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:12:13] 2026-03-09 23:12:04,886 | INFO     | PID=3337159 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 19:12:13] 2026-03-09 23:12:04,887 | INFO     | .. there are 69 such processes running
[2026-03-09 19:12:13] 2026-03-09 23:12:04,887 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:12:13] 2026-03-09 23:12:04,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:12:13] 2026-03-09 23:12:04,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:12:13] 2026-03-09 23:12:05,224 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:12:13] 2026-03-09 23:12:05,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646172976960)>', '<ExcThread(monitor, started 139645518063360)>']
[2026-03-09 19:12:13] 2026-03-09 23:12:05,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:12:13] 2026-03-09 23:12:05,893 | INFO     | [monitor] control thread has ended
[2026-03-09 19:12:13] 2026-03-09 23:12:10,358 | INFO     | all workflow threads have been joined
[2026-03-09 19:12:13] 2026-03-09 23:12:10,358 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:12:13] 2026-03-09 23:12:10,359 | INFO     | traces error code: 0
[2026-03-09 19:12:13] 2026-03-09 23:12:10,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:12:13] 2026-03-09 23:12:11,358 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:12:13] 2026-03-09 23:12:11,428 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:12:13] 2026-03-09 23:12:11,516 [wrapper] pilotpid: 3337159
[2026-03-09 19:12:13] 2026-03-09 23:12:11,564 [wrapper] Pilot exit status: 0
[2026-03-09 19:12:13] 2026-03-09 23:12:11,790 [wrapper] pandaids: 7040898175
[2026-03-09 19:12:13] 2026-03-09 23:12:12,166 [wrapper] cleanup supervisor_pilot  404547 3337160
[2026-03-09 19:12:13] 2026-03-09 23:12:12,240 [wrapper] Test setup, not cleaning
[2026-03-09 19:12:13] 2026-03-09 23:12:12,292 [wrapper] apfmon messages muted
[2026-03-09 19:12:13] 2026-03-09 23:12:12,346 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:12:13] 2026-03-09 23:12:12,369 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:12:13]  *** Error codes and diagnostics ***
[2026-03-09 19:12:13]     "exeErrorCode": 0,
[2026-03-09 19:12:13]     "exeErrorDiag": "",
[2026-03-09 19:12:13]     "pilotErrorCode": 0,
[2026-03-09 19:12:13]     "pilotErrorDiag": "",
[2026-03-09 19:12:13]  *** Listing of results directory ***
[2026-03-09 19:12:13] total 612420
[2026-03-09 19:12:13] -rwx------. 1 boincer umatlas     36322 Mar  9 11:44 runpilot2-wrapper.sh
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 11:46 queuedata.json
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 11:46 pilot3.tar.gz
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas       100 Mar  9 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:12:13] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 17:45 run_atlas
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas       105 Mar  9 17:45 job.xml
[2026-03-09 19:12:13] -rw-r--r--. 2 boincer umatlas 442759135 Mar  9 17:45 EVNT.46701403._001376.pool.root.1
[2026-03-09 19:12:13] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 17:45 start_atlas.sh
[2026-03-09 19:12:13] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 17:45 shared
[2026-03-09 19:12:13] -rw-r--r--. 2 boincer umatlas    597963 Mar  9 17:45 input.tar.gz
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas         0 Mar  9 17:45 boinc_lockfile
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas      2563 Mar  9 17:45 pandaJob.out
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas        57 Mar  9 17:45 setup.sh.local
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas   1002738 Mar  9 17:46 agis_schedconf.cvmfs.json
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas   1511578 Mar  9 17:46 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas       431 Mar  9 17:46 workernode_map.json
[2026-03-09 19:12:13] drwx------. 5 boincer umatlas      4096 Mar  9 17:46 pilot3
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas      7171 Mar  9 19:10 init_data.xml
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas 178248426 Mar  9 19:10 HITS.48955010._018843.pool.root.1
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas       530 Mar  9 19:10 boinc_task_state.xml
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas        95 Mar  9 19:11 pilot_heartbeat.json
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas      1032 Mar  9 19:11 memory_monitor_summary.json
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas    409187 Mar  9 19:11 log.48955010._018843.job.log.tgz.1
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas      6337 Mar  9 19:11 heartbeat.json
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas      5006 Mar  9 19:12 pilotlog.txt
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas    678323 Mar  9 19:12 log.48955010._018843.job.log.1
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas        27 Mar  9 19:12 wrapper_checkpoint.txt
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas       357 Mar  9 19:12 output.list
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas       620 Mar  9 19:12 runtime_log
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas   1105920 Mar  9 19:12 result.tar.gz
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 19:12 boinc_mmap_file
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas      9338 Mar  9 19:12 runtime_log.err
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas       651 Mar  9 19:12 e6PODmRxrJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKJaLDmS6YbLo.diag
[2026-03-09 19:12:13] -rw-r--r--. 1 boincer umatlas     21738 Mar  9 19:12 stderr.txt
[2026-03-09 19:12:13] HITS file was successfully produced:
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas 178248426 Mar  9 19:10 shared/HITS.pool.root.1
[2026-03-09 19:12:13]  *** Contents of shared directory: ***
[2026-03-09 19:12:13] total 608144
[2026-03-09 19:12:13] -rw-r--r--. 2 boincer umatlas 442759135 Mar  9 17:45 ATLAS.root_0
[2026-03-09 19:12:13] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 17:45 start_atlas.sh
[2026-03-09 19:12:13] -rw-r--r--. 2 boincer umatlas    597963 Mar  9 17:45 input.tar.gz
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas 178248426 Mar  9 19:10 HITS.pool.root.1
[2026-03-09 19:12:13] -rw-------. 1 boincer umatlas   1105920 Mar  9 19:12 result.tar.gz
19:12:14 (3322807): run_atlas exited; CPU time 19521.520448
19:12:14 (3322807): called boinc_finish(0)

</stderr_txt>
]]>

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