Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-10 14:40:33 (6292): vboxwrapper version 26210
2026-03-10 14:40:33 (6292): BOINC client version: 8.2.8
2026-03-10 14:40:34 (6292): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-10 14:40:34 (6292): Successfully copied 'init_data.xml' to the shared directory.
2026-03-10 14:40:34 (6292): Create VM. (boinc_07fd35e763c711ae, slot#0)
2026-03-10 14:40:35 (6292): Setting Memory Size for VM. (4400MB)
2026-03-10 14:40:35 (6292): Setting CPU Count for VM. (4)
2026-03-10 14:40:36 (6292): Setting Chipset Options for VM.
2026-03-10 14:40:36 (6292): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-10 14:40:36 (6292): Setting Boot Options for VM.
2026-03-10 14:40:37 (6292): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-10 14:40:37 (6292): Enabling VM Network Access.
2026-03-10 14:40:37 (6292): Disabling USB Support for VM.
2026-03-10 14:40:37 (6292): Disabling COM Port Support for VM.
2026-03-10 14:40:38 (6292): Disabling LPT Port Support for VM.
2026-03-10 14:40:38 (6292): Disabling Audio Support for VM.
2026-03-10 14:40:38 (6292): Disabling Clipboard Support for VM.
2026-03-10 14:40:39 (6292): Disabling Drag and Drop Support for VM.
2026-03-10 14:40:39 (6292): Adding storage controller(s) to VM.
2026-03-10 14:40:39 (6292): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-10 14:40:41 (6292): Adding VirtualBox Guest Additions to VM.
2026-03-10 14:40:41 (6292): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-10 14:40:42 (6292): forwarding host port 58139 to guest port 80
2026-03-10 14:40:42 (6292): Enabling remote desktop for VM.
2026-03-10 14:40:42 (6292): Required extension pack not installed, remote desktop not enabled.
2026-03-10 14:40:42 (6292): Enabling shared directory for VM.
2026-03-10 14:40:43 (6292): Starting VM using VBoxManage interface. (boinc_07fd35e763c711ae, slot#0)
2026-03-10 14:40:49 (6292): Successfully started VM. (PID = '8456')
2026-03-10 14:40:49 (6292): Reporting VM Process ID to BOINC.
2026-03-10 14:40:49 (6292): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-10 14:40:49 (6292): Guest Log: CPUID EDX: 0x178bfbff
2026-03-10 14:40:49 (6292): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-10 14:40:49 (6292): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-10 14:40:49 (6292): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-10 14:40:49 (6292): Detected: Web Application Enabled (http://localhost:58139)
2026-03-10 14:40:49 (6292): Preference change detected
2026-03-10 14:40:49 (6292): Setting CPU throttle for VM. (50%)
2026-03-10 14:40:50 (6292): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 14:40:51 (6292): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-10 14:40:51 (6292): Guest Log: BIOS: Booting from Hard Disk...
2026-03-10 14:40:55 (6292): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-10 14:40:55 (6292): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-10 14:40:55 (6292): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-10 14:41:03 (6292): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-10 14:41:03 (6292): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-10 14:41:14 (6292): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000150 main     Log opened 2026-03-10T14:41:13.408326000Z
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000251 main     OS Product: Linux
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000286 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000315 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000344 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000345 main     Process ID: 1306
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.000345 main     Package type: LINUX_64BITS_GENERIC
2026-03-10 14:41:14 (6292): Guest Log: 00:00:00.002627 main     5.2.32 r132073 started. Verbose level = 0
2026-03-10 14:41:14 (6292): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-10 14:41:14 (6292): Guest Log: [INFO] Mounting shared directory
2026-03-10 14:41:15 (6292): Guest Log: [INFO] Checking for init_data.xml
2026-03-10 14:41:20 (6292): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-10 14:41:21 (6292): Guest Log: [INFO] Detected branch: prod
2026-03-10 14:41:21 (6292): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-10 14:41:21 (6292): Guest Log: Copying input files
2026-03-10 14:41:24 (6292): Guest Log: 00:00:10.006803 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 695 978 000ns (GuestNow=1 773 150 084 717 986 000 ns GuestLast=1 773 153 673 413 964 000 ns fSetTimeLastLoop=true )
2026-03-10 14:41:27 (6292): Guest Log: Copied input files into RunAtlas.
2026-03-10 14:41:27 (6292): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-10 14:41:27 (6292): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-10 14:41:27 (6292): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-10 14:41:27 (6292): Guest Log: Further information can be found at the LHC@home message board.
2026-03-10 14:41:39 (6292): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-10 14:41:40 (6292): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-10 14:41:40 (6292): Guest Log: 2.6.3.0 1582 0 30112 157116 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-10 14:41:41 (6292): Guest Log: copied the webapp to /var/www
2026-03-10 14:41:42 (6292): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-10 14:41:42 (6292): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-10 14:41:42 (6292): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-10 14:41:42 (6292): Guest Log:  *** Starting ATLAS job. (PandaID=7040987063 taskID=48955015) ***
2026-03-10 16:20:55 (6292): Status Report: Elapsed Time: '6000.000000'
2026-03-10 16:20:55 (6292): Status Report: CPU Time: '11995.546875'
2026-03-10 18:01:01 (6292): Status Report: Elapsed Time: '12000.000000'
2026-03-10 18:01:01 (6292): Status Report: CPU Time: '26436.625000'
2026-03-10 19:41:13 (6292): Status Report: Elapsed Time: '18000.000000'
2026-03-10 19:41:13 (6292): Status Report: CPU Time: '40889.093750'
2026-03-10 20:10:40 (6292): Guest Log:  *** Job finished ***
2026-03-10 20:10:40 (6292): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:26,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:26,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:31,772 | INFO     | [monitor] cgroup control has ended
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:32,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967437387584)>', '<ExcThread(monitor, started 139966826911488)>']
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:33,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:33,467 | INFO     | [monitor] control thread has ended
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:37,795 | INFO     | all workflow threads have been joined
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:37,795 | INFO     | end of generic workflow (traces error code: 0)
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:37,796 | INFO     | traces error code: 0
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:37,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,049 [wrapper] ==== pilot stdout END ====
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,054 [wrapper] ==== wrapper stdout RESUME ====
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,059 [wrapper] pilotpid: 5986
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,064 [wrapper] Pilot exit status: 0
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,256 [wrapper] pandaids: 7040987063
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,354 [wrapper] cleanup supervisor_pilot 29683 5987
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,361 [wrapper] Test setup, not cleaning
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,367 [wrapper] apfmon messages muted
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,374 [wrapper] ==== wrapper stdout END ====
2026-03-10 20:10:40 (6292): Guest Log: 2026-03-10 19:10:38,379 [wrapper] ==== wrapper stderr END ====
2026-03-10 20:10:40 (6292): Guest Log:  *** Error codes and diagnostics ***
2026-03-10 20:10:40 (6292): Guest Log:     "exeErrorCode": 0,
2026-03-10 20:10:40 (6292): Guest Log:     "exeErrorDiag": "",
2026-03-10 20:10:40 (6292): Guest Log:     "pilotErrorCode": 0,
2026-03-10 20:10:40 (6292): Guest Log:     "pilotErrorDiag": "",
2026-03-10 20:10:40 (6292): Guest Log:  *** Listing of results directory ***
2026-03-10 20:10:40 (6292): Guest Log: total 187184
2026-03-10 20:10:40 (6292): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  9 17:06 pilot3.tar.gz
2026-03-10 20:10:40 (6292): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  9 17:09 runpilot2-wrapper.sh
2026-03-10 20:10:40 (6292): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  9 17:11 queuedata.json
2026-03-10 20:10:40 (6292): Guest Log: -rwxr-xr-x. 1 atlas atlas      8690 Mar 10 13:41 init_data.xml
2026-03-10 20:10:40 (6292): Guest Log: -rwxr-xr-x. 1 atlas atlas    597959 Mar 10 13:41 input.tar.gz
2026-03-10 20:10:40 (6292): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 10 13:41 start_atlas.sh
2026-03-10 20:10:40 (6292): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 10 13:41 EVNT.46701403._002240.pool.root.1 -> /data/./ATLAS.root_0
2026-03-10 20:10:40 (6292): Guest Log: -rw-r--r--. 1 atlas atlas      2571 Mar 10 13:41 pandaJob.out
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas   1006729 Mar 10 13:42 agis_schedconf.cvmfs.json
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas       426 Mar 10 13:42 workernode_map.json
2026-03-10 20:10:40 (6292): Guest Log: drwx------. 5 atlas atlas      4096 Mar 10 13:43 pilot3
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas 181602750 Mar 10 19:08 HITS.48955015._009415.pool.root.1
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 10 19:09 memory_monitor_summary.json
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 10 19:09 agis_ddmendpoints.agis.ALL.json
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas    466440 Mar 10 19:09 log.48955015._009415.job.log.tgz.1
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas      6367 Mar 10 19:09 heartbeat.json
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas        95 Mar 10 19:10 pilot_heartbeat.json
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas      4987 Mar 10 19:10 pilotlog.txt
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas   2634430 Mar 10 19:10 log.48955015._009415.job.log.1
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas       357 Mar 10 19:10 output.list
2026-03-10 20:10:40 (6292): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 10 19:10 runtime_log
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas   3123200 Mar 10 19:10 result.tar.gz
2026-03-10 20:10:40 (6292): Guest Log: -rw-r--r--. 1 atlas atlas      9031 Mar 10 19:10 runtime_log.err
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas       749 Mar 10 19:10 eRLNDmGItJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmAdaLDmlFFk1m.diag
2026-03-10 20:10:40 (6292): Guest Log: Looking for outputfile HITS.48955015._009415.pool.root.1
2026-03-10 20:10:40 (6292): Guest Log: HITS file was successfully produced
2026-03-10 20:10:40 (6292): Guest Log: -rw-------. 1 atlas atlas 181602750 Mar 10 19:08 /home/atlas/RunAtlas/HITS.48955015._009415.pool.root.1
2026-03-10 20:10:42 (6292): Guest Log: Successfully finished the ATLAS job!
2026-03-10 20:10:42 (6292): Guest Log: Copying the results back to the shared directory!
2026-03-10 20:10:42 (6292): Guest Log:  *** Contents of shared directory: ***
2026-03-10 20:10:42 (6292): Guest Log: total 612776
2026-03-10 20:10:42 (6292): Guest Log: -rwxrwxrwx. 1 root root 442125096 Mar 10 13:40 ATLAS.root_0
2026-03-10 20:10:42 (6292): Guest Log: -rwxrwxrwx. 1 root root 181602750 Mar 10 19:10 HITS.pool.root.1
2026-03-10 20:10:42 (6292): Guest Log: -rwxrwxrwx. 1 root root      8690 Mar 10 13:40 init_data.xml
2026-03-10 20:10:42 (6292): Guest Log: -rwxrwxrwx. 1 root root    597959 Mar  9 21:23 input.tar.gz
2026-03-10 20:10:42 (6292): Guest Log: -rwxrwxrwx. 1 root root   3123200 Mar 10 19:10 result.tar.gz
2026-03-10 20:10:42 (6292): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  9 21:23 start_atlas.sh
2026-03-10 20:10:42 (6292): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-10 20:10:43 (6292): VM Completion File Detected.
2026-03-10 20:10:43 (6292): Powering off VM.
2026-03-10 20:10:44 (6292): Successfully stopped VM.
2026-03-10 20:10:44 (6292): Deregistering VM. (boinc_07fd35e763c711ae, slot#0)
2026-03-10 20:10:44 (6292): Removing network bandwidth throttle group from VM.
2026-03-10 20:10:44 (6292): Removing VM from VirtualBox.
2026-03-10 20:10:49 (6292): called boinc_finish(0)

</stderr_txt>
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