Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:44:45 (1925780): wrapper (7.7.26015): starting
20:44:45 (1925780): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 20:44:45] Arguments: --nthreads 4
[2026-03-14 20:44:45] Threads: 4
[2026-03-14 20:44:45] Checking for CVMFS
[2026-03-14 20:44:45] No cvmfs_config command found, will try listing directly
[2026-03-14 20:44:45] CVMFS is ok
[2026-03-14 20:44:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 20:44:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 20:44:45] Further information can be found at the LHC@home message board.
[2026-03-14 20:44:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 20:44:45] Checking for apptainer binary...
[2026-03-14 20:44:45] which: no apptainer in ((null))
[2026-03-14 20:44:45] apptainer is not installed, using version from CVMFS
[2026-03-14 20:44:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 20:44:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-14 20:44:45] apptainer works
[2026-03-14 20:44:45] Set ATHENA_PROC_NUMBER=4
[2026-03-14 20:44:45] Set ATHENA_CORE_NUMBER=4
[2026-03-14 20:44:45] Starting ATLAS job with PandaID=7047694036
[2026-03-14 20:44:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 23:50:35]  *** The last 200 lines of the pilot log: ***
[2026-03-14 23:50:35] 2026-03-14 22:49:46,791 | INFO     | total number of processed events: 400 (read)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,803 | INFO     | using path: /var/lib/boinc/var/slot16/slots/8/PanDA_Pilot-7047694036/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,804 | INFO     | extracted standard info from prmon json
[2026-03-14 23:50:35] 2026-03-14 22:49:46,804 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 23:50:35] 2026-03-14 22:49:46,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 23:50:35] 2026-03-14 22:49:46,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 23:50:35] 2026-03-14 22:49:46,804 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 23:50:35] 2026-03-14 22:49:46,808 | INFO     | fitting pss+swap vs Time
[2026-03-14 23:50:35] 2026-03-14 22:49:46,808 | INFO     | sum of square deviations: 1838657730.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,809 | INFO     | sum of deviations: 11605565125.999998
[2026-03-14 23:50:35] 2026-03-14 22:49:46,809 | INFO     | mean x: 1773523031.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,809 | INFO     | mean y: 2337233.7458563535
[2026-03-14 23:50:35] 2026-03-14 22:49:46,809 | INFO     | intersect: -11192099176.521437
[2026-03-14 23:50:35] 2026-03-14 22:49:46,810 | INFO     | chi2: 1.38088382492039
[2026-03-14 23:50:35] 2026-03-14 22:49:46,810 | INFO     | sum of square deviations: 1690450300.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,811 | INFO     | sum of deviations: 11127475551.999998
[2026-03-14 23:50:35] 2026-03-14 22:49:46,811 | INFO     | mean x: 1773522878.5
[2026-03-14 23:50:35] 2026-03-14 22:49:46,811 | INFO     | mean y: 2336741.6818181816
[2026-03-14 23:50:35] 2026-03-14 22:49:46,811 | INFO     | intersect: -11671968306.754929
[2026-03-14 23:50:35] 2026-03-14 22:49:46,812 | INFO     | chi2: 1.3817238133204384
[2026-03-14 23:50:35] 2026-03-14 22:49:46,812 | INFO     | current chi2=1.3817238133204384 (change=-0.060829766044707814 %)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,812 | INFO     | right removable region: 175
[2026-03-14 23:50:35] 2026-03-14 22:49:46,812 | INFO     | sum of square deviations: 1690450300.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,813 | INFO     | sum of deviations: -11137100254.000002
[2026-03-14 23:50:35] 2026-03-14 22:49:46,813 | INFO     | mean x: 1773523183.5
[2026-03-14 23:50:35] 2026-03-14 22:49:46,813 | INFO     | mean y: 2360289.2386363638
[2026-03-14 23:50:35] 2026-03-14 22:49:46,813 | INFO     | intersect: 11686765028.870876
[2026-03-14 23:50:35] 2026-03-14 22:49:46,814 | INFO     | chi2: 0.05696652384220064
[2026-03-14 23:50:35] 2026-03-14 22:49:46,814 | INFO     | current chi2=0.05696652384220064 (change=95.87463312885973 %)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,814 | INFO     | sum of square deviations: 1550429070.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,815 | INFO     | sum of deviations: -7699857430.999999
[2026-03-14 23:50:35] 2026-03-14 22:49:46,815 | INFO     | mean x: 1773523336.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,815 | INFO     | mean y: 2356537.701754386
[2026-03-14 23:50:35] 2026-03-14 22:49:46,815 | INFO     | intersect: 8810161487.947886
[2026-03-14 23:50:35] 2026-03-14 22:49:46,816 | INFO     | chi2: 0.04833967790349813
[2026-03-14 23:50:35] 2026-03-14 22:49:46,816 | INFO     | current chi2=0.04833967790349813 (change=15.143711353354107 %)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,816 | INFO     | left removable region: 20
[2026-03-14 23:50:35] 2026-03-14 22:49:46,816 | INFO     | sum of square deviations: 1154663510.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,817 | INFO     | sum of deviations: -656990617.9999994
[2026-03-14 23:50:35] 2026-03-14 22:49:46,817 | INFO     | mean x: 1773523458.0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,817 | INFO     | mean y: 2347705.3677419354
[2026-03-14 23:50:35] 2026-03-14 22:49:46,817 | INFO     | intersect: 1011462709.5380185
[2026-03-14 23:50:35] 2026-03-14 22:49:46,818 | INFO     | chi2: 0.018396330078992017
[2026-03-14 23:50:35] 2026-03-14 22:49:46,818 | INFO     | current memory leak: -0.57 B/s (using 155 data points, chi2=0.02)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,818 | INFO     | could have reported an average CPU frequency of 2498 MHz (10 samples)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,818 | INFO     | ..............................
[2026-03-14 23:50:35] 2026-03-14 22:49:46,818 | INFO     | . Timing measurements:
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . get job = 0 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . initial setup = 10 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . payload setup = 9 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . stage-in = 0 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . payload execution = 11046 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . stage-out = 1 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | . log creation = 0 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,819 | INFO     | ..............................
[2026-03-14 23:50:35] 2026-03-14 22:49:46,906 | INFO     | 
[2026-03-14 23:50:35] 2026-03-14 22:49:46,906 | INFO     | job summary report
[2026-03-14 23:50:35] 2026-03-14 22:49:46,906 | INFO     | --------------------------------------------------
[2026-03-14 23:50:35] 2026-03-14 22:49:46,906 | INFO     | PanDA job id: 7047694036
[2026-03-14 23:50:35] 2026-03-14 22:49:46,906 | INFO     | task id: 48958610
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | errors: (none)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | pilot state: finished 
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | transexitcode: 0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | exeerrorcode: 0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | exeerrordiag: 
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | exitcode: 0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | exitmsg: OK
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | cpuconsumptiontime: 40958 s
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | nevents: 400
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | neventsw: 0
[2026-03-14 23:50:35] 2026-03-14 22:49:46,907 | INFO     | pid: 1935031
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | pgrp: 1935031
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | corecount: 4
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | event service: False
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | sizes: {0: 2237042, 1: 2280226, 11: 2280226, 11059: 2309550, 11061: 2318570, 11064: 2318948}
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | --------------------------------------------------
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | 
[2026-03-14 23:50:35] 2026-03-14 22:49:46,908 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/8
[2026-03-14 23:50:35] 2026-03-14 22:49:46,929 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 23:50:35] 2026-03-14 22:49:46,931 | INFO     | job 7047694036 has completed (purged errors)
[2026-03-14 23:50:35] 2026-03-14 22:49:46,932 | INFO     | overall cleanup function is called
[2026-03-14 23:50:35] 2026-03-14 22:49:47,499 | WARNING  | process 1935031 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 23:50:35] 2026-03-14 22:49:47,768 | INFO     | using path: /var/lib/boinc/var/slot16/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:50:35] 2026-03-14 22:49:47,769 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot16/slots/8/PanDA_Pilot-7047694036/payload.stdout) since it has not been created yet
[2026-03-14 23:50:35] 2026-03-14 22:49:47,770 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/8
[2026-03-14 23:50:35] 2026-03-14 22:49:47,786 | INFO     | sufficient remaining disk space (20128464896 B)
[2026-03-14 23:50:35] 2026-03-14 22:49:47,786 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 23:50:35] 2026-03-14 22:49:47,786 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot16/slots/8/PanDA_Pilot-7047694036/HITS.48958610._001719.pool.root.1 since it does not exist
[2026-03-14 23:50:35] 2026-03-14 22:49:47,939 | INFO     | --- collectZombieJob: --- 10, [1935031]
[2026-03-14 23:50:35] 2026-03-14 22:49:47,940 | INFO     | zombie collector waiting for pid 1935031
[2026-03-14 23:50:35] 2026-03-14 22:49:47,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 23:50:35] 2026-03-14 22:49:47,940 | INFO     | collected zombie processes
[2026-03-14 23:50:35] 2026-03-14 22:49:47,940 | INFO     | will attempt to kill all subprocesses of pid=1935031
[2026-03-14 23:50:35] 2026-03-14 22:49:48,392 | INFO     | number of running child processes to parent process 1935031: 1
[2026-03-14 23:50:35] 2026-03-14 22:49:48,392 | INFO     | maximum number of monitored processes: 6
[2026-03-14 23:50:35] 2026-03-14 22:49:48,392 | INFO     | aborting job monitoring since job object (job id=7047694036) has expired
[2026-03-14 23:50:35] 2026-03-14 22:49:48,553 | INFO     | process IDs to be killed: [1935031] (in reverse order)
[2026-03-14 23:50:35] 2026-03-14 22:49:48,700 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 23:50:35] 2026-03-14 22:49:48,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 23:50:35] 2026-03-14 22:49:48,719 | INFO     | did not find any defunct processes belonging to 1935031
[2026-03-14 23:50:35] 2026-03-14 22:49:48,739 | INFO     | did not find any defunct processes belonging to 1935031
[2026-03-14 23:50:35] 2026-03-14 22:49:48,739 | INFO     | ready for new job
[2026-03-14 23:50:35] 2026-03-14 22:49:48,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 23:50:35] 2026-03-14 22:49:48,741 | INFO     | **************************************
[2026-03-14 23:50:35] 2026-03-14 22:49:48,742 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 23:50:35] 2026-03-14 22:49:48,742 | INFO     | **************************************
[2026-03-14 23:50:35] 2026-03-14 22:49:48,742 | INFO     | 
[2026-03-14 23:50:35] 2026-03-14 22:49:48,745 | INFO     | architecture information:
[2026-03-14 23:50:35] 2026-03-14 22:49:48,749 | INFO     | executing command: cat /etc/os-release
[2026-03-14 23:50:35] 2026-03-14 22:49:48,770 | INFO     | cat /etc/os-release:
[2026-03-14 23:50:35] NAME="CentOS Linux"
[2026-03-14 23:50:35] VERSION="7 (Core)"
[2026-03-14 23:50:35] ID="centos"
[2026-03-14 23:50:35] ID_LIKE="rhel fedora"
[2026-03-14 23:50:35] VERSION_ID="7"
[2026-03-14 23:50:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 23:50:35] ANSI_COLOR="0;31"
[2026-03-14 23:50:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 23:50:35] HOME_URL="https://www.centos.org/"
[2026-03-14 23:50:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 23:50:35] 
[2026-03-14 23:50:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 23:50:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 23:50:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 23:50:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 23:50:35] 
[2026-03-14 23:50:35] 2026-03-14 22:49:48,770 | INFO     | **************************************
[2026-03-14 23:50:35] 2026-03-14 22:49:49,273 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/8
[2026-03-14 23:50:35] 2026-03-14 22:49:49,293 | INFO     | sufficient remaining disk space (20129513472 B)
[2026-03-14 23:50:35] 2026-03-14 22:49:49,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 23:50:35] 2026-03-14 22:49:49,294 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 23:50:35] 2026-03-14 22:49:49,294 | INFO     | update_server=False
[2026-03-14 23:50:35] 2026-03-14 22:49:49,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 23:50:35] 2026-03-14 22:49:49,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:50:35] 2026-03-14 22:49:49,295 | INFO     | will abort loop
[2026-03-14 23:50:35] 2026-03-14 22:49:49,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 23:50:35] 2026-03-14 22:49:49,536 | INFO     | all job control threads have been joined
[2026-03-14 23:50:35] 2026-03-14 22:49:49,985 | INFO     | all payload control threads have been joined
[2026-03-14 23:50:35] 2026-03-14 22:49:50,265 | INFO     | all data control threads have been joined
[2026-03-14 23:50:35] 2026-03-14 22:49:50,298 | INFO     | [job] retrieve thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:50,299 | INFO     | [job] job monitor thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:50,465 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:50,541 | INFO     | [job] control thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:50,717 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:50,984 | INFO     | [payload] failed_post thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:50,990 | INFO     | [payload] control thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,021 | INFO     | [data] copytool_in thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,270 | INFO     | [data] control thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,324 | INFO     | [payload] validate_post thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,534 | INFO     | [data] copytool_out thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,568 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,678 | INFO     | [job] validate thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:51,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:50:35] 2026-03-14 22:49:52,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 23:50:35] 2026-03-14 22:49:52,920 | INFO     | [job] queue monitor thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:49:56,798 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 23:50:35] 2026-03-14 22:50:19,616 | INFO     | PID=1929927 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 23:50:35] 2026-03-14 22:50:19,616 | INFO     | .. there are 13 such processes running
[2026-03-14 23:50:35] 2026-03-14 22:50:19,617 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 23:50:35] 2026-03-14 22:50:19,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 23:50:35] 2026-03-14 22:50:19,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 23:50:35] 2026-03-14 22:50:29,877 | INFO     | [monitor] cgroup control has ended
[2026-03-14 23:50:35] 2026-03-14 22:50:30,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23098375677760)>', '<ExcThread(monitor, started 23098061477632)>']
[2026-03-14 23:50:35] 2026-03-14 22:50:30,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 23:50:35] 2026-03-14 22:50:30,672 | INFO     | [monitor] control thread has ended
[2026-03-14 23:50:35] 2026-03-14 22:50:35,454 | INFO     | all workflow threads have been joined
[2026-03-14 23:50:35] 2026-03-14 22:50:35,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 23:50:35] 2026-03-14 22:50:35,455 | INFO     | traces error code: 0
[2026-03-14 23:50:35] 2026-03-14 22:50:35,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 23:50:35] 2026-03-14 22:50:35,589 [wrapper] ==== pilot stdout END ====
[2026-03-14 23:50:35] 2026-03-14 22:50:35,592 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 23:50:35] 2026-03-14 22:50:35,596 [wrapper] pilotpid: 1929927
[2026-03-14 23:50:35] 2026-03-14 22:50:35,599 [wrapper] Pilot exit status: 0
[2026-03-14 23:50:35] 2026-03-14 22:50:35,617 [wrapper] pandaids: 7047694036
[2026-03-14 23:50:35] 2026-03-14 22:50:35,705 [wrapper] cleanup supervisor_pilot 2178979 1929928
[2026-03-14 23:50:35] 2026-03-14 22:50:35,708 [wrapper] Test setup, not cleaning
[2026-03-14 23:50:35] 2026-03-14 22:50:35,712 [wrapper] apfmon messages muted
[2026-03-14 23:50:35] 2026-03-14 22:50:35,715 [wrapper] ==== wrapper stdout END ====
[2026-03-14 23:50:35] 2026-03-14 22:50:35,717 [wrapper] ==== wrapper stderr END ====
[2026-03-14 23:50:35]  *** Error codes and diagnostics ***
[2026-03-14 23:50:35]     "exeErrorCode": 0,
[2026-03-14 23:50:35]     "exeErrorDiag": "",
[2026-03-14 23:50:35]     "pilotErrorCode": 0,
[2026-03-14 23:50:35]     "pilotErrorDiag": "",
[2026-03-14 23:50:35]  *** Listing of results directory ***
[2026-03-14 23:50:35] total 434004
[2026-03-14 23:50:35] -rwx------. 1 boinc boinc     36322 Mar  9 21:45 runpilot2-wrapper.sh
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc      5111 Mar  9 21:46 queuedata.json
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc    584627 Mar  9 21:46 pilot3.tar.gz
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc       100 Mar 14 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 23:50:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 20:44 run_atlas
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc       105 Mar 14 20:44 job.xml
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc      6562 Mar 14 20:44 init_data.xml
[2026-03-14 23:50:35] -rw-r--r--. 2 boinc boinc 261301911 Mar 14 20:44 EVNT.48958608._000067.pool.root.1
[2026-03-14 23:50:35] -rw-r--r--. 2 boinc boinc     15845 Mar 14 20:44 start_atlas.sh
[2026-03-14 23:50:35] drwxrwx--x. 2 boinc boinc      4096 Mar 14 20:44 shared
[2026-03-14 23:50:35] -rw-r--r--. 2 boinc boinc    597943 Mar 14 20:44 input.tar.gz
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc         0 Mar 14 20:44 boinc_lockfile
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc      2527 Mar 14 20:44 pandaJob.out
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc   1005897 Mar 14 20:45 agis_schedconf.cvmfs.json
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc       447 Mar 14 20:45 workernode_map.json
[2026-03-14 23:50:35] drwx------. 5 boinc boinc      4096 Mar 14 20:45 pilot3
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc 175322258 Mar 14 23:49 HITS.48958610._001719.pool.root.1
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc       530 Mar 14 23:49 boinc_task_state.xml
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc      1046 Mar 14 23:49 memory_monitor_summary.json
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc   1511579 Mar 14 23:49 agis_ddmendpoints.agis.ALL.json
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc    366441 Mar 14 23:49 log.48958610._001719.job.log.tgz.1
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc      6397 Mar 14 23:49 heartbeat.json
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc      8192 Mar 14 23:50 boinc_mmap_file
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc        28 Mar 14 23:50 wrapper_checkpoint.txt
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc        95 Mar 14 23:50 pilot_heartbeat.json
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc      4831 Mar 14 23:50 pilotlog.txt
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc   1562658 Mar 14 23:50 log.48958610._001719.job.log.1
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc       357 Mar 14 23:50 output.list
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc       620 Mar 14 23:50 runtime_log
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc   1945600 Mar 14 23:50 result.tar.gz
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc      9205 Mar 14 23:50 runtime_log.err
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc       664 Mar 14 23:50 nCiMDmnewJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2AbLDm40kJ9m.diag
[2026-03-14 23:50:35] -rw-r--r--. 1 boinc boinc     21283 Mar 14 23:50 stderr.txt
[2026-03-14 23:50:35] HITS file was successfully produced:
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc 175322258 Mar 14 23:49 shared/HITS.pool.root.1
[2026-03-14 23:50:35]  *** Contents of shared directory: ***
[2026-03-14 23:50:35] total 428904
[2026-03-14 23:50:35] -rw-r--r--. 2 boinc boinc 261301911 Mar 14 20:44 ATLAS.root_0
[2026-03-14 23:50:35] -rw-r--r--. 2 boinc boinc     15845 Mar 14 20:44 start_atlas.sh
[2026-03-14 23:50:35] -rw-r--r--. 2 boinc boinc    597943 Mar 14 20:44 input.tar.gz
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc 175322258 Mar 14 23:49 HITS.pool.root.1
[2026-03-14 23:50:35] -rw-------. 1 boinc boinc   1945600 Mar 14 23:50 result.tar.gz
23:50:37 (1925780): run_atlas exited; CPU time 41395.771802
23:50:37 (1925780): called boinc_finish(0)

</stderr_txt>
]]>

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