Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:04 (3816015): wrapper (7.7.26015): starting
10:16:04 (3816015): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 10:16:04] Arguments: --nthreads 4
[2026-03-10 10:16:04] Threads: 4
[2026-03-10 10:16:04] Checking for CVMFS
[2026-03-10 10:16:04] No cvmfs_config command found, will try listing directly
[2026-03-10 10:16:04] CVMFS is ok
[2026-03-10 10:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 10:16:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 10:16:04] Further information can be found at the LHC@home message board.
[2026-03-10 10:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 10:16:04] Checking for apptainer binary...
[2026-03-10 10:16:04] which: no apptainer in ((null))
[2026-03-10 10:16:04] apptainer is not installed, using version from CVMFS
[2026-03-10 10:16:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 10:16:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/10/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-10 10:16:04] apptainer works
[2026-03-10 10:16:04] Set ATHENA_PROC_NUMBER=4
[2026-03-10 10:16:04] Set ATHENA_CORE_NUMBER=4
[2026-03-10 10:16:04] Starting ATLAS job with PandaID=7047527403
[2026-03-10 10:16:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 12:19:35]  *** The last 200 lines of the pilot log: ***
[2026-03-10 12:19:35] 2026-03-10 11:18:33,279 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/10/PanDA_Pilot-7047527403/jobReport.json
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/10/workernode_map.json
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | INFO     | this job has now completed (state=finished)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | INFO     | log transfer has been attempted: DONE
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | INFO     | job 7047527403 has finished - writing final server update
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3069748/.job.ad'
[2026-03-10 12:19:35] 2026-03-10 11:18:33,281 | INFO     | total number of processed events: 400 (read)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,299 | INFO     | using path: /var/lib/boinc/var/slot48/slots/10/PanDA_Pilot-7047527403/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,299 | INFO     | extracted standard info from prmon json
[2026-03-10 12:19:35] 2026-03-10 11:18:33,299 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 12:19:35] 2026-03-10 11:18:33,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 12:19:35] 2026-03-10 11:18:33,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 12:19:35] 2026-03-10 11:18:33,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | fitting pss+swap vs Time
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | sum of square deviations: 535786790.0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | sum of deviations: 9325256660.0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | mean x: 1773137828.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | mean y: 2339638.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | intersect: -30858752222.905468
[2026-03-10 12:19:35] 2026-03-10 11:18:33,301 | INFO     | chi2: 1.0851482593267572
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | sum of square deviations: 471562330.0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | sum of deviations: 8968993663.000006
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | mean x: 1773137676.0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | mean y: 2338792.0434782607
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | intersect: -33722281619.57964
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | chi2: 1.0866542237772552
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | current chi2=1.0866542237772552 (change=-0.1387796033909986 %)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | right removable region: 114
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | sum of square deviations: 471562330.0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | sum of deviations: -1652706916.0000002
[2026-03-10 12:19:35] 2026-03-10 11:18:33,302 | INFO     | mean x: 1773137981.0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | mean y: 2364975.269565217
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | intersect: 6216765952.169008
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | chi2: 0.000679815300678567
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | current chi2=0.000679815300678567 (change=99.93735277232068 %)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | sum of square deviations: 412686807.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | sum of deviations: -1386137251.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | mean x: 1773138133.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | mean y: 2364275.590909091
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | intersect: 5958001272.539328
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | chi2: 0.0005815990691549742
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | current chi2=0.0005815990691549742 (change=14.447487637532856 %)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | left removable region: 20
[2026-03-10 12:19:35] 2026-03-10 11:18:33,303 | INFO     | sum of square deviations: 257521107.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | sum of deviations: -603661520.4999999
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | mean x: 1773138255.5
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | mean y: 2362341.6914893617
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | intersect: 4158819052.222867
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | chi2: 0.00014346929725919297
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | current memory leak: -2.34 B/s (using 94 data points, chi2=0.00)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | could have reported an average CPU frequency of 3576 MHz (8 samples)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | ..............................
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . Timing measurements:
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . get job = 0 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . initial setup = 5 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . payload setup = 6 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . stage-in = 0 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . payload execution = 7310 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . stage-out = 0 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | . log creation = 0 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,304 | INFO     | ..............................
[2026-03-10 12:19:35] 2026-03-10 11:18:33,354 | INFO     | 
[2026-03-10 12:19:35] 2026-03-10 11:18:33,354 | INFO     | job summary report
[2026-03-10 12:19:35] 2026-03-10 11:18:33,354 | INFO     | --------------------------------------------------
[2026-03-10 12:19:35] 2026-03-10 11:18:33,354 | INFO     | PanDA job id: 7047527403
[2026-03-10 12:19:35] 2026-03-10 11:18:33,354 | INFO     | task id: 48998012
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | errors: (none)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | pilot state: finished 
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | transexitcode: 0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | exeerrorcode: 0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | exeerrordiag: 
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | exitcode: 0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | exitmsg: OK
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | cpuconsumptiontime: 27939 s
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | nevents: 400
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | neventsw: 0
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | pid: 3828431
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | pgrp: 3828431
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | corecount: 4
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | event service: False
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | sizes: {0: 2279846, 1: 2280307, 11: 2280307, 7320: 2307692, 7321: 2316714, 7324: 2316770, 7325: 2317120}
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | --------------------------------------------------
[2026-03-10 12:19:35] 2026-03-10 11:18:33,357 | INFO     | 
[2026-03-10 12:19:35] 2026-03-10 11:18:33,358 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/10
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | job 7047527403 has completed (purged errors)
[2026-03-10 12:19:35] 2026-03-10 11:18:33,378 | INFO     | overall cleanup function is called
[2026-03-10 12:19:35] 2026-03-10 11:18:34,384 | INFO     | --- collectZombieJob: --- 10, [3828431]
[2026-03-10 12:19:35] 2026-03-10 11:18:34,385 | INFO     | zombie collector waiting for pid 3828431
[2026-03-10 12:19:35] 2026-03-10 11:18:34,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 12:19:35] 2026-03-10 11:18:34,385 | INFO     | collected zombie processes
[2026-03-10 12:19:35] 2026-03-10 11:18:34,385 | INFO     | will attempt to kill all subprocesses of pid=3828431
[2026-03-10 12:19:35] 2026-03-10 11:18:34,812 | INFO     | process IDs to be killed: [3828431] (in reverse order)
[2026-03-10 12:19:35] 2026-03-10 11:18:35,024 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 12:19:35] 2026-03-10 11:18:35,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 12:19:35] 2026-03-10 11:18:35,052 | INFO     | did not find any defunct processes belonging to 3828431
[2026-03-10 12:19:35] 2026-03-10 11:18:35,079 | INFO     | did not find any defunct processes belonging to 3828431
[2026-03-10 12:19:35] 2026-03-10 11:18:35,079 | INFO     | ready for new job
[2026-03-10 12:19:35] 2026-03-10 11:18:35,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 12:19:35] 2026-03-10 11:18:35,081 | INFO     | **************************************
[2026-03-10 12:19:35] 2026-03-10 11:18:35,081 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 12:19:35] 2026-03-10 11:18:35,081 | INFO     | **************************************
[2026-03-10 12:19:35] 2026-03-10 11:18:35,081 | INFO     | 
[2026-03-10 12:19:35] 2026-03-10 11:18:35,087 | INFO     | architecture information:
[2026-03-10 12:19:35] 2026-03-10 11:18:35,087 | INFO     | executing command: cat /etc/os-release
[2026-03-10 12:19:35] 2026-03-10 11:18:35,101 | INFO     | cat /etc/os-release:
[2026-03-10 12:19:35] NAME="CentOS Linux"
[2026-03-10 12:19:35] VERSION="7 (Core)"
[2026-03-10 12:19:35] ID="centos"
[2026-03-10 12:19:35] ID_LIKE="rhel fedora"
[2026-03-10 12:19:35] VERSION_ID="7"
[2026-03-10 12:19:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 12:19:35] ANSI_COLOR="0;31"
[2026-03-10 12:19:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 12:19:35] HOME_URL="https://www.centos.org/"
[2026-03-10 12:19:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 12:19:35] 
[2026-03-10 12:19:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 12:19:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 12:19:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 12:19:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 12:19:35] 
[2026-03-10 12:19:35] 2026-03-10 11:18:35,101 | INFO     | **************************************
[2026-03-10 12:19:35] 2026-03-10 11:18:35,604 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/10
[2026-03-10 12:19:35] 2026-03-10 11:18:35,618 | INFO     | sufficient remaining disk space (20929576960 B)
[2026-03-10 12:19:35] 2026-03-10 11:18:35,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 12:19:35] 2026-03-10 11:18:35,618 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 12:19:35] 2026-03-10 11:18:35,618 | INFO     | update_server=False
[2026-03-10 12:19:35] 2026-03-10 11:18:35,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 12:19:35] 2026-03-10 11:18:35,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 12:19:35] 2026-03-10 11:18:35,623 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 12:19:35] 2026-03-10 11:18:35,623 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 12:19:35] 2026-03-10 11:18:35,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:19:35] 2026-03-10 11:18:35,623 | INFO     | will abort loop
[2026-03-10 12:19:35] 2026-03-10 11:18:35,985 | INFO     | all job control threads have been joined
[2026-03-10 12:19:35] 2026-03-10 11:18:36,279 | INFO     | all data control threads have been joined
[2026-03-10 12:19:35] 2026-03-10 11:18:36,381 | INFO     | all payload control threads have been joined
[2026-03-10 12:19:35] 2026-03-10 11:18:36,624 | INFO     | [job] retrieve thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:36,628 | INFO     | [job] job monitor thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:36,877 | INFO     | [job] validate thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:36,891 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:36,891 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:36,967 | INFO     | [data] copytool_in thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:36,991 | INFO     | [job] control thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:37,212 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:37,281 | INFO     | [data] control thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:37,345 | INFO     | [payload] failed_post thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:37,387 | INFO     | [payload] control thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:37,624 | INFO     | [data] copytool_out thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:37,792 | INFO     | [payload] validate_post thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:38,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 12:19:35] 2026-03-10 11:18:38,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 12:19:35] 2026-03-10 11:18:39,370 | INFO     | [job] queue monitor thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:42,647 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:18:45,819 | INFO     | job.realtimelogging is not enabled
[2026-03-10 12:19:35] 2026-03-10 11:18:46,824 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 12:19:35] 2026-03-10 11:19:06,654 | INFO     | PID=3820540 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 12:19:35] 2026-03-10 11:19:06,655 | INFO     | .. there are 56 such processes running
[2026-03-10 12:19:35] 2026-03-10 11:19:06,655 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 12:19:35] 2026-03-10 11:19:06,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 12:19:35] 2026-03-10 11:19:06,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 12:19:35] 2026-03-10 11:19:29,453 | INFO     | [monitor] cgroup control has ended
[2026-03-10 12:19:35] 2026-03-10 11:19:29,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22531431106368)>', '<ExcThread(monitor, started 22531123693312)>']
[2026-03-10 12:19:35] 2026-03-10 11:19:30,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 12:19:35] 2026-03-10 11:19:30,772 | INFO     | [monitor] control thread has ended
[2026-03-10 12:19:35] 2026-03-10 11:19:34,935 | INFO     | all workflow threads have been joined
[2026-03-10 12:19:35] 2026-03-10 11:19:34,936 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 12:19:35] 2026-03-10 11:19:34,936 | INFO     | traces error code: 0
[2026-03-10 12:19:35] 2026-03-10 11:19:34,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 12:19:35] 2026-03-10 11:19:35,061 [wrapper] ==== pilot stdout END ====
[2026-03-10 12:19:35] 2026-03-10 11:19:35,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 12:19:35] 2026-03-10 11:19:35,066 [wrapper] pilotpid: 3820540
[2026-03-10 12:19:35] 2026-03-10 11:19:35,069 [wrapper] Pilot exit status: 0
[2026-03-10 12:19:35] 2026-03-10 11:19:35,078 [wrapper] pandaids: 7047527403
[2026-03-10 12:19:35] 2026-03-10 11:19:35,209 [wrapper] cleanup supervisor_pilot 1003766 3820541
[2026-03-10 12:19:35] 2026-03-10 11:19:35,211 [wrapper] Test setup, not cleaning
[2026-03-10 12:19:35] 2026-03-10 11:19:35,213 [wrapper] apfmon messages muted
[2026-03-10 12:19:35] 2026-03-10 11:19:35,215 [wrapper] ==== wrapper stdout END ====
[2026-03-10 12:19:35] 2026-03-10 11:19:35,216 [wrapper] ==== wrapper stderr END ====
[2026-03-10 12:19:35]  *** Error codes and diagnostics ***
[2026-03-10 12:19:35]     "exeErrorCode": 0,
[2026-03-10 12:19:35]     "exeErrorDiag": "",
[2026-03-10 12:19:35]     "pilotErrorCode": 0,
[2026-03-10 12:19:35]     "pilotErrorDiag": "",
[2026-03-10 12:19:35]  *** Listing of results directory ***
[2026-03-10 12:19:35] total 607236
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:46 queuedata.json
[2026-03-10 12:19:35] -rwx------. 1 boinc boinc     36322 Mar  9 17:46 runpilot2-wrapper.sh
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc       100 Mar 10 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 12:19:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 10:15 run_atlas
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc       105 Mar 10 10:15 job.xml
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc      6706 Mar 10 10:16 init_data.xml
[2026-03-10 12:19:35] -rw-r--r--. 2 boinc boinc 343956241 Mar 10 10:16 EVNT.48998009._000083.pool.root.1
[2026-03-10 12:19:35] -rw-r--r--. 2 boinc boinc     15845 Mar 10 10:16 start_atlas.sh
[2026-03-10 12:19:35] drwxrwx--x. 2 boinc boinc      4096 Mar 10 10:16 shared
[2026-03-10 12:19:35] -rw-r--r--. 2 boinc boinc    597964 Mar 10 10:16 input.tar.gz
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc         0 Mar 10 10:16 boinc_lockfile
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc      2587 Mar 10 10:16 pandaJob.out
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc   1005081 Mar 10 10:16 agis_schedconf.cvmfs.json
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc   1511578 Mar 10 10:16 agis_ddmendpoints.agis.ALL.json
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc       443 Mar 10 10:16 workernode_map.json
[2026-03-10 12:19:35] drwx------. 5 boinc boinc      4096 Mar 10 10:16 pilot3
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc 271182470 Mar 10 12:17 HITS.48998012._002139.pool.root.1
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc       529 Mar 10 12:18 boinc_task_state.xml
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc      1031 Mar 10 12:18 memory_monitor_summary.json
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc    312584 Mar 10 12:18 log.48998012._002139.job.log.tgz.1
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc      6352 Mar 10 12:18 heartbeat.json
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc        95 Mar 10 12:19 pilot_heartbeat.json
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc        27 Mar 10 12:19 wrapper_checkpoint.txt
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc      8192 Mar 10 12:19 boinc_mmap_file
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc      5088 Mar 10 12:19 pilotlog.txt
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc   1054121 Mar 10 12:19 log.48998012._002139.job.log.1
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc       357 Mar 10 12:19 output.list
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc       620 Mar 10 12:19 runtime_log
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc   1382400 Mar 10 12:19 result.tar.gz
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc      9221 Mar 10 12:19 runtime_log.err
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc       663 Mar 10 12:19 EA1MDmOvsJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmD9cLDmoTNqTn.diag
[2026-03-10 12:19:35] -rw-r--r--. 1 boinc boinc     21108 Mar 10 12:19 stderr.txt
[2026-03-10 12:19:35] HITS file was successfully produced:
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc 271182470 Mar 10 12:17 shared/HITS.pool.root.1
[2026-03-10 12:19:35]  *** Contents of shared directory: ***
[2026-03-10 12:19:35] total 602684
[2026-03-10 12:19:35] -rw-r--r--. 2 boinc boinc 343956241 Mar 10 10:16 ATLAS.root_0
[2026-03-10 12:19:35] -rw-r--r--. 2 boinc boinc     15845 Mar 10 10:16 start_atlas.sh
[2026-03-10 12:19:35] -rw-r--r--. 2 boinc boinc    597964 Mar 10 10:16 input.tar.gz
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc 271182470 Mar 10 12:17 HITS.pool.root.1
[2026-03-10 12:19:35] -rw-------. 1 boinc boinc   1382400 Mar 10 12:19 result.tar.gz
12:19:37 (3816015): run_atlas exited; CPU time 28223.448543
12:19:37 (3816015): called boinc_finish(0)

</stderr_txt>
]]>

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