Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:29:14 (6979): wrapper (7.7.26015): starting
16:29:14 (6979): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 16:29:14] Arguments: --nthreads 8
[2026-03-09 16:29:14] Threads: 8
[2026-03-09 16:29:14] Checking for CVMFS
[2026-03-09 16:29:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 16:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 16:29:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 16:29:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 16:29:14] 2.11.2.0 5808 319173 123224 157089 0 52 9829084 18432001 2749 130560 0 236483473 99.967 14633943 8657 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-09 16:29:14] CVMFS is ok
[2026-03-09 16:29:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:29:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:29:14] Further information can be found at the LHC@home message board.
[2026-03-09 16:29:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:29:14] Checking for apptainer binary...
[2026-03-09 16:29:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 16:29:14] Running /usr/bin/apptainer --version
[2026-03-09 16:29:14] apptainer version 1.3.2-1.el7
[2026-03-09 16:29:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:29:15] c-9-34.aglt2.org
[2026-03-09 16:29:15] apptainer works
[2026-03-09 16:29:15] Set ATHENA_PROC_NUMBER=8
[2026-03-09 16:29:15] Set ATHENA_CORE_NUMBER=8
[2026-03-09 16:29:15] Starting ATLAS job with PandaID=7035202020
[2026-03-09 16:29:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:28:47]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:28:47] 2026-03-09 22:28:04,710 | INFO     | log transfer has been attempted: DONE
[2026-03-09 18:28:47] 2026-03-09 22:28:04,710 | INFO     | job 7035202020 has finished - writing final server update
[2026-03-09 18:28:47] 2026-03-09 22:28:04,711 | INFO     | total number of processed events: 400 (read)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,721 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7035202020/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,721 | INFO     | extracted standard info from prmon json
[2026-03-09 18:28:47] 2026-03-09 22:28:04,721 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 18:28:47] 2026-03-09 22:28:04,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:28:47] 2026-03-09 22:28:04,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:28:47] 2026-03-09 22:28:04,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:28:47] 2026-03-09 22:28:04,728 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:28:47] 2026-03-09 22:28:04,728 | INFO     | sum of square deviations: 496597218.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,729 | INFO     | sum of deviations: -12435289383.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,729 | INFO     | mean x: 1773091729.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,729 | INFO     | mean y: 2496156.6495726495
[2026-03-09 18:28:47] 2026-03-09 22:28:04,730 | INFO     | intersect: 44402480597.80046
[2026-03-09 18:28:47] 2026-03-09 22:28:04,730 | INFO     | chi2: 2.220032996628423
[2026-03-09 18:28:47] 2026-03-09 22:28:04,730 | INFO     | sum of square deviations: 435610028.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,731 | INFO     | sum of deviations: -3977891800.999998
[2026-03-09 18:28:47] 2026-03-09 22:28:04,731 | INFO     | mean x: 1773091576.5
[2026-03-09 18:28:47] 2026-03-09 22:28:04,731 | INFO     | mean y: 2516649.464285714
[2026-03-09 18:28:47] 2026-03-09 22:28:04,732 | INFO     | intersect: 16193986062.977215
[2026-03-09 18:28:47] 2026-03-09 22:28:04,732 | INFO     | chi2: 1.4572883327370232
[2026-03-09 18:28:47] 2026-03-09 22:28:04,732 | INFO     | current chi2=1.4572883327370232 (change=34.35735707756527 %)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,732 | INFO     | sum of square deviations: 379832238.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,733 | INFO     | sum of deviations: -3259356330.9999995
[2026-03-09 18:28:47] 2026-03-09 22:28:04,733 | INFO     | mean x: 1773091424.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,734 | INFO     | mean y: 2518614.878504673
[2026-03-09 18:28:47] 2026-03-09 22:28:04,734 | INFO     | intersect: 15217490331.566238
[2026-03-09 18:28:47] 2026-03-09 22:28:04,734 | INFO     | chi2: 1.4584042121042424
[2026-03-09 18:28:47] 2026-03-09 22:28:04,734 | INFO     | current chi2=1.4584042121042424 (change=-0.07657231188583247 %)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,734 | INFO     | right removable region: 106
[2026-03-09 18:28:47] 2026-03-09 22:28:04,735 | INFO     | sum of square deviations: 435610028.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,735 | INFO     | sum of deviations: -27900210988.000008
[2026-03-09 18:28:47] 2026-03-09 22:28:04,736 | INFO     | mean x: 1773091881.5
[2026-03-09 18:28:47] 2026-03-09 22:28:04,736 | INFO     | mean y: 2533979.8214285714
[2026-03-09 18:28:47] 2026-03-09 22:28:04,736 | INFO     | intersect: 113566580753.69392
[2026-03-09 18:28:47] 2026-03-09 22:28:04,736 | INFO     | chi2: 0.8891100540749902
[2026-03-09 18:28:47] 2026-03-09 22:28:04,736 | INFO     | current chi2=0.8891100540749902 (change=59.950592832390925 %)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,737 | INFO     | sum of square deviations: 379832238.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,737 | INFO     | sum of deviations: -25992127938.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,738 | INFO     | mean x: 1773092034.0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,738 | INFO     | mean y: 2528651.0841121497
[2026-03-09 18:28:47] 2026-03-09 22:28:04,738 | INFO     | intersect: 121336186995.20984
[2026-03-09 18:28:47] 2026-03-09 22:28:04,738 | INFO     | chi2: 0.8783476258773018
[2026-03-09 18:28:47] 2026-03-09 22:28:04,738 | INFO     | current chi2=0.8783476258773018 (change=1.2104719936932276 %)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,739 | INFO     | left removable region: 20
[2026-03-09 18:28:47] 2026-03-09 22:28:04,739 | INFO     | sum of square deviations: 197203697.5
[2026-03-09 18:28:47] 2026-03-09 22:28:04,739 | INFO     | sum of deviations: -10895486360.5
[2026-03-09 18:28:47] 2026-03-09 22:28:04,740 | INFO     | mean x: 1773092003.5
[2026-03-09 18:28:47] 2026-03-09 22:28:04,740 | INFO     | mean y: 2536375.7790697673
[2026-03-09 18:28:47] 2026-03-09 22:28:04,740 | INFO     | intersect: 97965708390.06581
[2026-03-09 18:28:47] 2026-03-09 22:28:04,740 | INFO     | chi2: 0.06344620358461864
[2026-03-09 18:28:47] 2026-03-09 22:28:04,741 | INFO     | current memory leak: -55.25 B/s (using 86 data points, chi2=0.06)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,741 | INFO     | could have reported an average CPU frequency of 2999 MHz (7 samples)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,741 | INFO     | ..............................
[2026-03-09 18:28:47] 2026-03-09 22:28:04,741 | INFO     | . Timing measurements:
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . get job = 0 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . initial setup = 6 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . payload setup = 4 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . stage-in = 0 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . payload execution = 7090 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . stage-out = 0 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,742 | INFO     | . log creation = 0 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,743 | INFO     | ..............................
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | 
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | job summary report
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | --------------------------------------------------
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | PanDA job id: 7035202020
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | task id: 48700874
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | errors: (none)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,887 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | pilot state: finished 
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | transexitcode: 0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | exeerrorcode: 0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | exeerrordiag: 
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | exitcode: 0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | exitmsg: OK
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | cpuconsumptiontime: 53189 s
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | nevents: 400
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | neventsw: 0
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | pid: 15902
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | pgrp: 15902
[2026-03-09 18:28:47] 2026-03-09 22:28:04,888 | INFO     | corecount: 8
[2026-03-09 18:28:47] 2026-03-09 22:28:04,889 | INFO     | event service: False
[2026-03-09 18:28:47] 2026-03-09 22:28:04,889 | INFO     | sizes: {0: 2279769, 1: 2280230, 12: 2280230, 7098: 2307525, 7099: 2316578, 7102: 2316578, 7103: 2316900}
[2026-03-09 18:28:47] 2026-03-09 22:28:04,889 | INFO     | --------------------------------------------------
[2026-03-09 18:28:47] 2026-03-09 22:28:04,889 | INFO     | 
[2026-03-09 18:28:47] 2026-03-09 22:28:04,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-09 18:28:47] 2026-03-09 22:28:04,905 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,905 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,905 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | job 7035202020 has completed (purged errors)
[2026-03-09 18:28:47] 2026-03-09 22:28:04,907 | INFO     | overall cleanup function is called
[2026-03-09 18:28:47] 2026-03-09 22:28:05,915 | INFO     | --- collectZombieJob: --- 10, [15902]
[2026-03-09 18:28:47] 2026-03-09 22:28:05,915 | INFO     | zombie collector waiting for pid 15902
[2026-03-09 18:28:47] 2026-03-09 22:28:05,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:28:47] 2026-03-09 22:28:05,916 | INFO     | collected zombie processes
[2026-03-09 18:28:47] 2026-03-09 22:28:05,916 | INFO     | will attempt to kill all subprocesses of pid=15902
[2026-03-09 18:28:47] 2026-03-09 22:28:06,157 | INFO     | process IDs to be killed: [15902] (in reverse order)
[2026-03-09 18:28:47] 2026-03-09 22:28:06,208 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:28:47] 2026-03-09 22:28:06,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:28:47] 2026-03-09 22:28:06,212 | INFO     | did not find any defunct processes belonging to 15902
[2026-03-09 18:28:47] 2026-03-09 22:28:06,215 | INFO     | did not find any defunct processes belonging to 15902
[2026-03-09 18:28:47] 2026-03-09 22:28:06,216 | INFO     | ready for new job
[2026-03-09 18:28:47] 2026-03-09 22:28:06,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:28:47] 2026-03-09 22:28:06,217 | INFO     | **************************************
[2026-03-09 18:28:47] 2026-03-09 22:28:06,217 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:28:47] 2026-03-09 22:28:06,217 | INFO     | **************************************
[2026-03-09 18:28:47] 2026-03-09 22:28:06,217 | INFO     | 
[2026-03-09 18:28:47] 2026-03-09 22:28:06,218 | INFO     | architecture information:
[2026-03-09 18:28:47] 2026-03-09 22:28:06,219 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:28:47] 2026-03-09 22:28:06,228 | INFO     | cat /etc/os-release:
[2026-03-09 18:28:47] NAME="CentOS Linux"
[2026-03-09 18:28:47] VERSION="7 (Core)"
[2026-03-09 18:28:47] ID="centos"
[2026-03-09 18:28:47] ID_LIKE="rhel fedora"
[2026-03-09 18:28:47] VERSION_ID="7"
[2026-03-09 18:28:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:28:47] ANSI_COLOR="0;31"
[2026-03-09 18:28:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:28:47] HOME_URL="https://www.centos.org/"
[2026-03-09 18:28:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:28:47] 
[2026-03-09 18:28:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:28:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:28:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:28:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:28:47] 
[2026-03-09 18:28:47] 2026-03-09 22:28:06,228 | INFO     | **************************************
[2026-03-09 18:28:47] 2026-03-09 22:28:06,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-09 18:28:47] 2026-03-09 22:28:06,744 | INFO     | sufficient remaining disk space (104066973696 B)
[2026-03-09 18:28:47] 2026-03-09 22:28:06,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:28:47] 2026-03-09 22:28:06,745 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:28:47] 2026-03-09 22:28:06,745 | INFO     | update_server=False
[2026-03-09 18:28:47] 2026-03-09 22:28:06,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:28:47] 2026-03-09 22:28:06,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:28:47] 2026-03-09 22:28:06,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:28:47] 2026-03-09 22:28:06,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:28:47] 2026-03-09 22:28:06,900 | INFO     | aborting loop
[2026-03-09 18:28:47] 2026-03-09 22:28:07,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:28:47] 2026-03-09 22:28:07,152 | INFO     | all data control threads have been joined
[2026-03-09 18:28:47] 2026-03-09 22:28:07,391 | INFO     | all job control threads have been joined
[2026-03-09 18:28:47] 2026-03-09 22:28:07,707 | INFO     | all payload control threads have been joined
[2026-03-09 18:28:47] 2026-03-09 22:28:07,750 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:07,751 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:07,905 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,080 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,158 | INFO     | [data] control thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,259 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,396 | INFO     | [job] control thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,436 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,713 | INFO     | [payload] control thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:08,867 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:09,092 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:09,134 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:09,188 | INFO     | [job] validate thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:09,199 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:10,752 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:16,942 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:28:47] 2026-03-09 22:28:17,948 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:28:47] 2026-03-09 22:28:36,474 | INFO     | PID=10669 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 18:28:47] 2026-03-09 22:28:36,474 | INFO     | .. there are 4 such processes running
[2026-03-09 18:28:47] 2026-03-09 22:28:36,474 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:28:47] 2026-03-09 22:28:36,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:28:47] 2026-03-09 22:28:36,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:28:47] 2026-03-09 22:28:40,829 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:28:47] 2026-03-09 22:28:42,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429187090240)>', '<ExcThread(monitor, started 140428745615104)>']
[2026-03-09 18:28:47] 2026-03-09 22:28:42,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:28:47] 2026-03-09 22:28:42,507 | INFO     | [monitor] control thread has ended
[2026-03-09 18:28:47] 2026-03-09 22:28:47,202 | INFO     | all workflow threads have been joined
[2026-03-09 18:28:47] 2026-03-09 22:28:47,202 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:28:47] 2026-03-09 22:28:47,203 | INFO     | traces error code: 0
[2026-03-09 18:28:47] 2026-03-09 22:28:47,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:28:47] 2026-03-09 22:28:47,323 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:28:47] 2026-03-09 22:28:47,325 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:28:47] 2026-03-09 22:28:47,328 [wrapper] pilotpid: 10669
[2026-03-09 18:28:47] 2026-03-09 22:28:47,330 [wrapper] Pilot exit status: 0
[2026-03-09 18:28:47] 2026-03-09 22:28:47,339 [wrapper] pandaids: 7035202020
[2026-03-09 18:28:47] 2026-03-09 22:28:47,373 [wrapper] cleanup supervisor_pilot  7608 10670
[2026-03-09 18:28:47] 2026-03-09 22:28:47,387 [wrapper] Test setup, not cleaning
[2026-03-09 18:28:47] 2026-03-09 22:28:47,390 [wrapper] apfmon messages muted
[2026-03-09 18:28:47] 2026-03-09 22:28:47,411 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:28:47] 2026-03-09 22:28:47,414 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:28:47]  *** Error codes and diagnostics ***
[2026-03-09 18:28:47]     "exeErrorCode": 0,
[2026-03-09 18:28:47]     "exeErrorDiag": "",
[2026-03-09 18:28:47]     "pilotErrorCode": 0,
[2026-03-09 18:28:47]     "pilotErrorDiag": "",
[2026-03-09 18:28:47]  *** Listing of results directory ***
[2026-03-09 18:28:47] total 332660
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas    584627 Mar  1 11:16 pilot3.tar.gz
[2026-03-09 18:28:47] -rwx------ 1 boincer umatlas     36322 Mar  1 11:18 runpilot2-wrapper.sh
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas      5111 Mar  1 11:20 queuedata.json
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas       100 Mar  9 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:28:47] -rwxr-xr-x 1 boincer umatlas      7986 Mar  9 16:29 run_atlas
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas       105 Mar  9 16:29 job.xml
[2026-03-09 18:28:47] -rw-r--r-- 2 boincer umatlas 191577597 Mar  9 16:29 EVNT.48700872._000011.pool.root.1
[2026-03-09 18:28:47] -rw-r--r-- 2 boincer umatlas    597957 Mar  9 16:29 input.tar.gz
[2026-03-09 18:28:47] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 16:29 start_atlas.sh
[2026-03-09 18:28:47] drwxrwx--x 2 boincer umatlas      4096 Mar  9 16:29 shared
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas         0 Mar  9 16:29 boinc_lockfile
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas      2548 Mar  9 16:29 pandaJob.out
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas        57 Mar  9 16:29 setup.sh.local
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas   1002738 Mar  9 16:29 agis_schedconf.cvmfs.json
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas   1511578 Mar  9 16:29 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas       438 Mar  9 16:29 workernode_map.json
[2026-03-09 18:28:47] drwx------ 5 boincer umatlas      4096 Mar  9 16:29 pilot3
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas      6036 Mar  9 18:27 init_data.xml
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas 142403896 Mar  9 18:27 HITS.48700874._000257.pool.root.1
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas       529 Mar  9 18:27 boinc_task_state.xml
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas      1048 Mar  9 18:27 memory_monitor_summary.json
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas    355173 Mar  9 18:28 log.48700874._000257.job.log.tgz.1
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas      6395 Mar  9 18:28 heartbeat.json
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas      8192 Mar  9 18:28 boinc_mmap_file
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas        27 Mar  9 18:28 wrapper_checkpoint.txt
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas        95 Mar  9 18:28 pilot_heartbeat.json
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas      4890 Mar  9 18:28 pilotlog.txt
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas   1008117 Mar  9 18:28 log.48700874._000257.job.log.1
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas       357 Mar  9 18:28 output.list
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas       620 Mar  9 18:28 runtime_log
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas   1382400 Mar  9 18:28 result.tar.gz
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas      9331 Mar  9 18:28 runtime_log.err
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas       656 Mar  9 18:28 RLHKDmofyG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmz4ALDmvqZ8km.diag
[2026-03-09 18:28:47] -rw-r--r-- 1 boincer umatlas     20986 Mar  9 18:28 stderr.txt
[2026-03-09 18:28:47] HITS file was successfully produced:
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas 142403896 Mar  9 18:27 shared/HITS.pool.root.1
[2026-03-09 18:28:47]  *** Contents of shared directory: ***
[2026-03-09 18:28:47] total 328112
[2026-03-09 18:28:47] -rw-r--r-- 2 boincer umatlas 191577597 Mar  9 16:29 ATLAS.root_0
[2026-03-09 18:28:47] -rw-r--r-- 2 boincer umatlas    597957 Mar  9 16:29 input.tar.gz
[2026-03-09 18:28:47] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 16:29 start_atlas.sh
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas 142403896 Mar  9 18:27 HITS.pool.root.1
[2026-03-09 18:28:47] -rw------- 1 boincer umatlas   1382400 Mar  9 18:28 result.tar.gz
18:28:49 (6979): run_atlas exited; CPU time 53360.423001
18:28:49 (6979): called boinc_finish(0)

</stderr_txt>
]]>

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