Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:16:02 (1770807): wrapper (7.7.26015): starting
02:16:02 (1770807): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 02:16:02] Arguments: --nthreads 4
[2026-03-10 02:16:02] Threads: 4
[2026-03-10 02:16:02] Checking for CVMFS
[2026-03-10 02:16:02] No cvmfs_config command found, will try listing directly
[2026-03-10 02:16:02] CVMFS is ok
[2026-03-10 02:16:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 02:16:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 02:16:02] Further information can be found at the LHC@home message board.
[2026-03-10 02:16:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 02:16:02] Checking for apptainer binary...
[2026-03-10 02:16:02] which: no apptainer in ((null))
[2026-03-10 02:16:02] apptainer is not installed, using version from CVMFS
[2026-03-10 02:16:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 02:16:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-10 02:16:02] apptainer works
[2026-03-10 02:16:02] Set ATHENA_PROC_NUMBER=4
[2026-03-10 02:16:02] Set ATHENA_CORE_NUMBER=4
[2026-03-10 02:16:02] Starting ATLAS job with PandaID=7047527413
[2026-03-10 02:16:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 04:14:38]  *** The last 200 lines of the pilot log: ***
[2026-03-10 04:14:38] 2026-03-10 03:13:47,039 | INFO     | using path: /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047527413/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,039 | INFO     | extracted standard info from prmon json
[2026-03-10 04:14:38] 2026-03-10 03:13:47,039 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 04:14:38] 2026-03-10 03:13:47,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 04:14:38] 2026-03-10 03:13:47,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 04:14:38] 2026-03-10 03:13:47,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 04:14:38] 2026-03-10 03:13:47,041 | INFO     | fitting pss+swap vs Time
[2026-03-10 04:14:38] 2026-03-10 03:13:47,041 | INFO     | sum of square deviations: 471562330.0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,041 | INFO     | sum of deviations: 6469650056.999998
[2026-03-10 04:14:38] 2026-03-10 03:13:47,041 | INFO     | mean x: 1773108882.0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | mean y: 2349912.1304347827
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | intersect: -24324007919.502346
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | chi2: 1.0622818864830734
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | sum of square deviations: 412686807.5
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | sum of deviations: 6182027767.500001
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | mean x: 1773108729.5
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | mean y: 2349167.0090909093
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | intersect: -26558731054.983826
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | chi2: 1.063835795549963
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | current chi2=1.063835795549963 (change=-0.14628029402198045 %)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,042 | INFO     | right removable region: 109
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | sum of square deviations: 412686807.5
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | sum of deviations: -1507294536.5000005
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | mean x: 1773109034.5
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | mean y: 2369729.390909091
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | intersect: 6478461312.038946
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | chi2: 0.0005042253619177683
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | current chi2=0.0005042253619177683 (change=99.95253375132026 %)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,043 | INFO     | sum of square deviations: 358927660.0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | sum of deviations: -1360750972.9999998
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | mean x: 1773109187.0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | mean y: 2369318.038095238
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | intersect: 6724503943.843999
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | chi2: 0.00046831928280191885
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | current chi2=0.00046831928280191885 (change=7.1210378984675495 %)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | left removable region: 20
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | sum of square deviations: 218571540.0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | sum of deviations: -815857981.0000001
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | mean x: 1773109309.0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,044 | INFO     | mean y: 2367706.617977528
[2026-03-10 04:14:38] 2026-03-10 03:13:47,045 | INFO     | intersect: 6620820323.7018175
[2026-03-10 04:14:38] 2026-03-10 03:13:47,045 | INFO     | chi2: 0.00028700853788848706
[2026-03-10 04:14:38] 2026-03-10 03:13:47,045 | INFO     | current memory leak: -3.73 B/s (using 89 data points, chi2=0.00)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | could have reported an average CPU frequency of 3566 MHz (7 samples)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | ..............................
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . Timing measurements:
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . get job = 0 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . initial setup = 7 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . payload setup = 7 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . stage-in = 0 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . payload execution = 7020 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . stage-out = 0 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | . log creation = 0 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,050 | INFO     | ..............................
[2026-03-10 04:14:38] 2026-03-10 03:13:47,106 | INFO     | 
[2026-03-10 04:14:38] 2026-03-10 03:13:47,107 | INFO     | job summary report
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | --------------------------------------------------
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | PanDA job id: 7047527413
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | task id: 48998012
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | errors: (none)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | pilot state: finished 
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | transexitcode: 0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | exeerrorcode: 0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | exeerrordiag: 
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | exitcode: 0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | exitmsg: OK
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | cpuconsumptiontime: 26916 s
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | nevents: 400
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | neventsw: 0
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | pid: 1781139
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | pgrp: 1781139
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | corecount: 4
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | event service: False
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | sizes: {0: 2279787, 1: 2280304, 11: 2280304, 7032: 2307579, 7033: 2316599, 7037: 2316977}
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | --------------------------------------------------
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | 
[2026-03-10 04:14:38] 2026-03-10 03:13:47,108 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/9
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | job 7047527413 has completed (purged errors)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,133 | INFO     | overall cleanup function is called
[2026-03-10 04:14:38] 2026-03-10 03:13:47,403 | WARNING  | process 1781139 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 04:14:38] 2026-03-10 03:13:47,705 | INFO     | using path: /var/lib/boinc/var/slot36/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,705 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047527413/payload.stdout) since it has not been created yet
[2026-03-10 04:14:38] 2026-03-10 03:13:47,706 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/9
[2026-03-10 04:14:38] 2026-03-10 03:13:47,720 | INFO     | sufficient remaining disk space (21070086144 B)
[2026-03-10 04:14:38] 2026-03-10 03:13:47,720 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-10 04:14:38] 2026-03-10 03:13:47,720 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot36/slots/9/PanDA_Pilot-7047527413/HITS.48998012._002149.pool.root.1 since it does not exist
[2026-03-10 04:14:38] 2026-03-10 03:13:48,140 | INFO     | --- collectZombieJob: --- 10, [1781139]
[2026-03-10 04:14:38] 2026-03-10 03:13:48,144 | INFO     | zombie collector waiting for pid 1781139
[2026-03-10 04:14:38] 2026-03-10 03:13:48,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 04:14:38] 2026-03-10 03:13:48,147 | INFO     | collected zombie processes
[2026-03-10 04:14:38] 2026-03-10 03:13:48,147 | INFO     | will attempt to kill all subprocesses of pid=1781139
[2026-03-10 04:14:38] 2026-03-10 03:13:48,285 | INFO     | number of running child processes to parent process 1781139: 1
[2026-03-10 04:14:38] 2026-03-10 03:13:48,285 | INFO     | maximum number of monitored processes: 6
[2026-03-10 04:14:38] 2026-03-10 03:13:48,285 | INFO     | aborting job monitoring since job object (job id=7047527413) has expired
[2026-03-10 04:14:38] 2026-03-10 03:13:48,649 | INFO     | process IDs to be killed: [1781139] (in reverse order)
[2026-03-10 04:14:38] 2026-03-10 03:13:48,865 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 04:14:38] 2026-03-10 03:13:48,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 04:14:38] 2026-03-10 03:13:48,891 | INFO     | did not find any defunct processes belonging to 1781139
[2026-03-10 04:14:38] 2026-03-10 03:13:48,916 | INFO     | did not find any defunct processes belonging to 1781139
[2026-03-10 04:14:38] 2026-03-10 03:13:48,917 | INFO     | ready for new job
[2026-03-10 04:14:38] 2026-03-10 03:13:48,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 04:14:38] 2026-03-10 03:13:48,918 | INFO     | **************************************
[2026-03-10 04:14:38] 2026-03-10 03:13:48,918 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 04:14:38] 2026-03-10 03:13:48,918 | INFO     | **************************************
[2026-03-10 04:14:38] 2026-03-10 03:13:48,918 | INFO     | 
[2026-03-10 04:14:38] 2026-03-10 03:13:48,924 | INFO     | architecture information:
[2026-03-10 04:14:38] 2026-03-10 03:13:48,925 | INFO     | executing command: cat /etc/os-release
[2026-03-10 04:14:38] 2026-03-10 03:13:48,940 | INFO     | cat /etc/os-release:
[2026-03-10 04:14:38] NAME="CentOS Linux"
[2026-03-10 04:14:38] VERSION="7 (Core)"
[2026-03-10 04:14:38] ID="centos"
[2026-03-10 04:14:38] ID_LIKE="rhel fedora"
[2026-03-10 04:14:38] VERSION_ID="7"
[2026-03-10 04:14:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 04:14:38] ANSI_COLOR="0;31"
[2026-03-10 04:14:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 04:14:38] HOME_URL="https://www.centos.org/"
[2026-03-10 04:14:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 04:14:38] 
[2026-03-10 04:14:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 04:14:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 04:14:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 04:14:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 04:14:38] 
[2026-03-10 04:14:38] 2026-03-10 03:13:48,940 | INFO     | **************************************
[2026-03-10 04:14:38] 2026-03-10 03:13:49,443 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/9
[2026-03-10 04:14:38] 2026-03-10 03:13:49,456 | INFO     | sufficient remaining disk space (21067988992 B)
[2026-03-10 04:14:38] 2026-03-10 03:13:49,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 04:14:38] 2026-03-10 03:13:49,456 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 04:14:38] 2026-03-10 03:13:49,456 | INFO     | update_server=False
[2026-03-10 04:14:38] 2026-03-10 03:13:49,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 04:14:38] 2026-03-10 03:13:49,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 04:14:38] 2026-03-10 03:13:49,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:14:38] 2026-03-10 03:13:49,457 | INFO     | aborting loop
[2026-03-10 04:14:38] 2026-03-10 03:13:49,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 04:14:38] 2026-03-10 03:13:50,134 | INFO     | all payload control threads have been joined
[2026-03-10 04:14:38] 2026-03-10 03:13:50,335 | INFO     | all data control threads have been joined
[2026-03-10 04:14:38] 2026-03-10 03:13:50,461 | INFO     | [job] retrieve thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:50,462 | INFO     | [job] job monitor thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:50,646 | INFO     | [job] validate thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:50,766 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:50,842 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:50,882 | INFO     | [payload] failed_post thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:51,029 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:51,110 | INFO     | [data] copytool_in thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:51,129 | INFO     | all job control threads have been joined
[2026-03-10 04:14:38] 2026-03-10 03:13:51,139 | INFO     | [payload] control thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:51,340 | INFO     | [data] control thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:51,462 | INFO     | [data] copytool_out thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:51,583 | INFO     | [payload] validate_post thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:52,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 04:14:38] 2026-03-10 03:13:52,134 | INFO     | [job] control thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:53,123 | INFO     | [job] queue monitor thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:13:53,464 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:14:00,354 | INFO     | job.realtimelogging is not enabled
[2026-03-10 04:14:38] 2026-03-10 03:14:01,359 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 04:14:38] 2026-03-10 03:14:20,214 | INFO     | PID=1775345 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 04:14:38] 2026-03-10 03:14:20,215 | INFO     | .. there are 64 such processes running
[2026-03-10 04:14:38] 2026-03-10 03:14:20,215 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 04:14:38] 2026-03-10 03:14:20,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 04:14:38] 2026-03-10 03:14:20,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 04:14:38] 2026-03-10 03:14:30,913 | INFO     | [monitor] cgroup control has ended
[2026-03-10 04:14:38] 2026-03-10 03:14:32,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22537922385728)>', '<ExcThread(monitor, started 22537687025408)>']
[2026-03-10 04:14:38] 2026-03-10 03:14:33,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 04:14:38] 2026-03-10 03:14:33,281 | INFO     | [monitor] control thread has ended
[2026-03-10 04:14:38] 2026-03-10 03:14:37,693 | INFO     | all workflow threads have been joined
[2026-03-10 04:14:38] 2026-03-10 03:14:37,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 04:14:38] 2026-03-10 03:14:37,696 | INFO     | traces error code: 0
[2026-03-10 04:14:38] 2026-03-10 03:14:37,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 04:14:38] 2026-03-10 03:14:37,841 [wrapper] ==== pilot stdout END ====
[2026-03-10 04:14:38] 2026-03-10 03:14:37,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 04:14:38] 2026-03-10 03:14:37,847 [wrapper] pilotpid: 1775345
[2026-03-10 04:14:38] 2026-03-10 03:14:37,849 [wrapper] Pilot exit status: 0
[2026-03-10 04:14:38] 2026-03-10 03:14:37,870 [wrapper] pandaids: 7047527413
[2026-03-10 04:14:38] 2026-03-10 03:14:37,984 [wrapper] cleanup supervisor_pilot 2934030 1775346
[2026-03-10 04:14:38] 2026-03-10 03:14:37,988 [wrapper] Test setup, not cleaning
[2026-03-10 04:14:38] 2026-03-10 03:14:37,992 [wrapper] apfmon messages muted
[2026-03-10 04:14:38] 2026-03-10 03:14:37,997 [wrapper] ==== wrapper stdout END ====
[2026-03-10 04:14:38] 2026-03-10 03:14:37,999 [wrapper] ==== wrapper stderr END ====
[2026-03-10 04:14:38]  *** Error codes and diagnostics ***
[2026-03-10 04:14:38]     "exeErrorCode": 0,
[2026-03-10 04:14:38]     "exeErrorDiag": "",
[2026-03-10 04:14:38]     "pilotErrorCode": 0,
[2026-03-10 04:14:38]     "pilotErrorDiag": "",
[2026-03-10 04:14:38]  *** Listing of results directory ***
[2026-03-10 04:14:38] total 591948
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:42 queuedata.json
[2026-03-10 04:14:38] -rwx------. 1 boinc boinc     36322 Mar  9 17:42 runpilot2-wrapper.sh
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc       100 Mar 10 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 04:14:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 02:15 run_atlas
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc       105 Mar 10 02:15 job.xml
[2026-03-10 04:14:38] -rw-r--r--. 2 boinc boinc 340907609 Mar 10 02:16 EVNT.48998009._000084.pool.root.1
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc      6704 Mar 10 02:16 init_data.xml
[2026-03-10 04:14:38] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:16 start_atlas.sh
[2026-03-10 04:14:38] drwxrwx--x. 2 boinc boinc      4096 Mar 10 02:16 shared
[2026-03-10 04:14:38] -rw-r--r--. 2 boinc boinc    597965 Mar 10 02:16 input.tar.gz
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc         0 Mar 10 02:16 boinc_lockfile
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc      2586 Mar 10 02:16 pandaJob.out
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc   1002346 Mar 10 02:16 agis_schedconf.cvmfs.json
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc   1511578 Mar 10 02:16 agis_ddmendpoints.agis.ALL.json
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc       443 Mar 10 02:16 workernode_map.json
[2026-03-10 04:14:38] drwx------. 5 boinc boinc      4096 Mar 10 02:16 pilot3
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc       529 Mar 10 04:13 boinc_task_state.xml
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc 258705103 Mar 10 04:13 HITS.48998012._002149.pool.root.1
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc        95 Mar 10 04:13 pilot_heartbeat.json
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc      1031 Mar 10 04:13 memory_monitor_summary.json
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc    293074 Mar 10 04:13 log.48998012._002149.job.log.tgz.1
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc      6350 Mar 10 04:13 heartbeat.json
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc      8192 Mar 10 04:14 boinc_mmap_file
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc      4901 Mar 10 04:14 pilotlog.txt
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc        27 Mar 10 04:14 wrapper_checkpoint.txt
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc   1008316 Mar 10 04:14 log.48998012._002149.job.log.1
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc       357 Mar 10 04:14 output.list
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc       620 Mar 10 04:14 runtime_log
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc   1320960 Mar 10 04:14 result.tar.gz
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc      9204 Mar 10 04:14 runtime_log.err
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc       663 Mar 10 04:14 lMmKDmvrsJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmL6cLDmhIKiYm.diag
[2026-03-10 04:14:38] -rw-r--r--. 1 boinc boinc     21266 Mar 10 04:14 stderr.txt
[2026-03-10 04:14:38] HITS file was successfully produced:
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc 258705103 Mar 10 04:13 shared/HITS.pool.root.1
[2026-03-10 04:14:38]  *** Contents of shared directory: ***
[2026-03-10 04:14:38] total 587464
[2026-03-10 04:14:38] -rw-r--r--. 2 boinc boinc 340907609 Mar 10 02:16 ATLAS.root_0
[2026-03-10 04:14:38] -rw-r--r--. 2 boinc boinc     15845 Mar 10 02:16 start_atlas.sh
[2026-03-10 04:14:38] -rw-r--r--. 2 boinc boinc    597965 Mar 10 02:16 input.tar.gz
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc 258705103 Mar 10 04:13 HITS.pool.root.1
[2026-03-10 04:14:38] -rw-------. 1 boinc boinc   1320960 Mar 10 04:14 result.tar.gz
04:14:39 (1770807): run_atlas exited; CPU time 27212.231924
04:14:39 (1770807): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN