Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:55:10 (1659943): wrapper (7.7.26015): starting
19:55:10 (1659943): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 19:55:10] Arguments: --nthreads 8
[2026-03-09 19:55:10] Threads: 8
[2026-03-09 19:55:10] Checking for CVMFS
[2026-03-09 19:55:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 19:55:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 19:55:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 19:55:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 19:55:12] 2.13.3.0 13122 179058 277812 157095 2 372 17524003 32935936 24473 16776704 0 619164669 99.516 800729237 34582 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-09 19:55:12] CVMFS is ok
[2026-03-09 19:55:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 19:55:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 19:55:12] Further information can be found at the LHC@home message board.
[2026-03-09 19:55:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 19:55:12] Checking for apptainer binary...
[2026-03-09 19:55:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 19:55:12] Running /usr/bin/apptainer --version
[2026-03-09 19:55:12] apptainer version 1.4.5-2.el9
[2026-03-09 19:55:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 19:55:13] c6-8-25-2.aglt2.org
[2026-03-09 19:55:13] apptainer works
[2026-03-09 19:55:13] Set ATHENA_PROC_NUMBER=8
[2026-03-09 19:55:13] Set ATHENA_CORE_NUMBER=8
[2026-03-09 19:55:13] Starting ATLAS job with PandaID=7047461044
[2026-03-09 19:55:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 03:42:37]  *** The last 200 lines of the pilot log: ***
[2026-03-10 03:42:37] 2026-03-10 07:41:52,616 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7047461044/jobReport.json
[2026-03-10 03:42:37] 2026-03-10 07:41:52,647 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-10 03:42:37] 2026-03-10 07:41:52,647 | INFO     | this job has now completed (state=finished)
[2026-03-10 03:42:37] 2026-03-10 07:41:52,647 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 03:42:37] 2026-03-10 07:41:52,647 | INFO     | log transfer has been attempted: DONE
[2026-03-10 03:42:37] 2026-03-10 07:41:52,647 | INFO     | job 7047461044 has finished - writing final server update
[2026-03-10 03:42:37] 2026-03-10 07:41:52,669 | INFO     | total number of processed events: 400 (read)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,087 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7047461044/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,088 | INFO     | extracted standard info from prmon json
[2026-03-10 03:42:37] 2026-03-10 07:41:53,088 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 03:42:37] 2026-03-10 07:41:53,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 03:42:37] 2026-03-10 07:41:53,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 03:42:37] 2026-03-10 07:41:53,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 03:42:37] 2026-03-10 07:41:53,191 | INFO     | fitting pss+swap vs Time
[2026-03-10 03:42:37] 2026-03-10 07:41:53,192 | INFO     | sum of square deviations: 29598051790.297516
[2026-03-10 03:42:37] 2026-03-10 07:41:53,261 | INFO     | sum of deviations: 88368783829.8709
[2026-03-10 03:42:37] 2026-03-10 07:41:53,262 | INFO     | mean x: 1773114561.4070022
[2026-03-10 03:42:37] 2026-03-10 07:41:53,262 | INFO     | mean y: 2484395.1028446387
[2026-03-10 03:42:37] 2026-03-10 07:41:53,262 | INFO     | intersect: -5291376785.109541
[2026-03-10 03:42:37] 2026-03-10 07:41:53,263 | INFO     | chi2: 3.013094287001587
[2026-03-10 03:42:37] 2026-03-10 07:41:53,263 | INFO     | sum of square deviations: 28637179239.716763
[2026-03-10 03:42:37] 2026-03-10 07:41:53,286 | INFO     | sum of deviations: 115174209772.08847
[2026-03-10 03:42:37] 2026-03-10 07:41:53,305 | INFO     | mean x: 1773114408.902655
[2026-03-10 03:42:37] 2026-03-10 07:41:53,305 | INFO     | mean y: 2488609.842920354
[2026-03-10 03:42:37] 2026-03-10 07:41:53,305 | INFO     | intersect: -7128697362.4695835
[2026-03-10 03:42:37] 2026-03-10 07:41:53,306 | INFO     | chi2: 2.3268679464306077
[2026-03-10 03:42:37] 2026-03-10 07:41:53,306 | INFO     | current chi2=2.3268679464306077 (change=22.774804742464998 %)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,306 | INFO     | right removable region: 451
[2026-03-10 03:42:37] 2026-03-10 07:41:53,307 | INFO     | sum of square deviations: 28637177044.460133
[2026-03-10 03:42:37] 2026-03-10 07:41:53,329 | INFO     | sum of deviations: -12913667754.477886
[2026-03-10 03:42:37] 2026-03-10 07:41:53,330 | INFO     | mean x: 1773114713.9115045
[2026-03-10 03:42:37] 2026-03-10 07:41:53,330 | INFO     | mean y: 2500422.9380530976
[2026-03-10 03:42:37] 2026-03-10 07:41:53,330 | INFO     | intersect: 802069956.9909492
[2026-03-10 03:42:37] 2026-03-10 07:41:53,349 | INFO     | chi2: 0.8727473498283661
[2026-03-10 03:42:37] 2026-03-10 07:41:53,349 | INFO     | current chi2=0.8727473498283661 (change=71.03484767823642 %)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,350 | INFO     | sum of square deviations: 27697380726.259502
[2026-03-10 03:42:37] 2026-03-10 07:41:53,373 | INFO     | sum of deviations: -33837840540.261734
[2026-03-10 03:42:37] 2026-03-10 07:41:53,373 | INFO     | mean x: 1773114866.411633
[2026-03-10 03:42:37] 2026-03-10 07:41:53,373 | INFO     | mean y: 2503813.5503355702
[2026-03-10 03:42:37] 2026-03-10 07:41:53,373 | INFO     | intersect: 2168715077.4306307
[2026-03-10 03:42:37] 2026-03-10 07:41:53,374 | INFO     | chi2: 0.7920172589716588
[2026-03-10 03:42:37] 2026-03-10 07:41:53,374 | INFO     | current chi2=0.7920172589716588 (change=9.250110111773319 %)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,374 | INFO     | left removable region: 20
[2026-03-10 03:42:37] 2026-03-10 07:41:53,394 | INFO     | sum of square deviations: 24828484354.310925
[2026-03-10 03:42:37] 2026-03-10 07:41:53,417 | INFO     | sum of deviations: -6546113099.22274
[2026-03-10 03:42:37] 2026-03-10 07:41:53,417 | INFO     | mean x: 1773114988.410673
[2026-03-10 03:42:37] 2026-03-10 07:41:53,417 | INFO     | mean y: 2508347.5266821347
[2026-03-10 03:42:37] 2026-03-10 07:41:53,417 | INFO     | intersect: 469996055.8550393
[2026-03-10 03:42:37] 2026-03-10 07:41:53,418 | INFO     | chi2: 0.08398479016212956
[2026-03-10 03:42:37] 2026-03-10 07:41:53,418 | INFO     | current memory leak: -0.26 B/s (using 431 data points, chi2=0.08)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,419 | INFO     | could have reported an average CPU frequency of 2708 MHz (19 samples)
[2026-03-10 03:42:37] 2026-03-10 07:41:53,419 | INFO     | ..............................
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . Timing measurements:
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . get job = 0 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . initial setup = 26 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . payload setup = 28 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . stage-in = 0 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . payload execution = 27859 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . stage-out = 10 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | . log creation = 2 s
[2026-03-10 03:42:37] 2026-03-10 07:41:53,438 | INFO     | ..............................
[2026-03-10 03:42:37] 2026-03-10 07:41:54,710 | INFO     | 
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | job summary report
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | --------------------------------------------------
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | PanDA job id: 7047461044
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | task id: 48966988
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | errors: (none)
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | pilot state: finished 
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | transexitcode: 0
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | exeerrorcode: 0
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | exeerrordiag: 
[2026-03-10 03:42:37] 2026-03-10 07:41:54,711 | INFO     | exitcode: 0
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | exitmsg: OK
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | cpuconsumptiontime: 53140 s
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | nevents: 400
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | neventsw: 0
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | pid: 1678857
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | pgrp: 1678857
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | corecount: 8
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | event service: False
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | sizes: {0: 2279838, 1: 2280299, 27895: 2316966, 27897: 2316965, 27910: 2326019, 27912: 2326075, 27917: 2326397}
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | --------------------------------------------------
[2026-03-10 03:42:37] 2026-03-10 07:41:54,712 | INFO     | 
[2026-03-10 03:42:37] 2026-03-10 07:41:54,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-10 03:42:37] 2026-03-10 07:41:55,095 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,095 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,095 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,095 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 03:42:37] 2026-03-10 07:41:55,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,097 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 03:42:37] 2026-03-10 07:41:55,097 | INFO     | job 7047461044 has completed (purged errors)
[2026-03-10 03:42:37] 2026-03-10 07:41:55,097 | INFO     | overall cleanup function is called
[2026-03-10 03:42:37] 2026-03-10 07:41:56,249 | INFO     | --- collectZombieJob: --- 10, [1678857]
[2026-03-10 03:42:37] 2026-03-10 07:41:56,249 | INFO     | zombie collector waiting for pid 1678857
[2026-03-10 03:42:37] 2026-03-10 07:41:56,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 03:42:37] 2026-03-10 07:41:56,249 | INFO     | collected zombie processes
[2026-03-10 03:42:37] 2026-03-10 07:41:56,249 | INFO     | will attempt to kill all subprocesses of pid=1678857
[2026-03-10 03:42:37] 2026-03-10 07:41:59,152 | INFO     | PID=1669588 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 03:42:37] 2026-03-10 07:41:59,152 | INFO     | .. there are 36 such processes running
[2026-03-10 03:42:37] 2026-03-10 07:42:00,790 | INFO     | process IDs to be killed: [1678857] (in reverse order)
[2026-03-10 03:42:37] 2026-03-10 07:42:01,423 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 03:42:37] 2026-03-10 07:42:01,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 03:42:37] 2026-03-10 07:42:01,501 | INFO     | did not find any defunct processes belonging to 1678857
[2026-03-10 03:42:37] 2026-03-10 07:42:01,630 | INFO     | did not find any defunct processes belonging to 1678857
[2026-03-10 03:42:37] 2026-03-10 07:42:01,630 | INFO     | ready for new job
[2026-03-10 03:42:37] 2026-03-10 07:42:01,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 03:42:37] 2026-03-10 07:42:01,633 | INFO     | **************************************
[2026-03-10 03:42:37] 2026-03-10 07:42:01,641 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 03:42:37] 2026-03-10 07:42:01,641 | INFO     | **************************************
[2026-03-10 03:42:37] 2026-03-10 07:42:01,641 | INFO     | 
[2026-03-10 03:42:37] 2026-03-10 07:42:01,665 | INFO     | architecture information:
[2026-03-10 03:42:37] 2026-03-10 07:42:01,680 | INFO     | executing command: cat /etc/os-release
[2026-03-10 03:42:37] 2026-03-10 07:42:01,766 | INFO     | cat /etc/os-release:
[2026-03-10 03:42:37] NAME="CentOS Linux"
[2026-03-10 03:42:37] VERSION="7 (Core)"
[2026-03-10 03:42:37] ID="centos"
[2026-03-10 03:42:37] ID_LIKE="rhel fedora"
[2026-03-10 03:42:37] VERSION_ID="7"
[2026-03-10 03:42:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 03:42:37] ANSI_COLOR="0;31"
[2026-03-10 03:42:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 03:42:37] HOME_URL="https://www.centos.org/"
[2026-03-10 03:42:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 03:42:37] 
[2026-03-10 03:42:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 03:42:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 03:42:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 03:42:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 03:42:37] 
[2026-03-10 03:42:37] 2026-03-10 07:42:01,766 | INFO     | **************************************
[2026-03-10 03:42:37] 2026-03-10 07:42:02,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-10 03:42:37] 2026-03-10 07:42:02,429 | INFO     | sufficient remaining disk space (68165828608 B)
[2026-03-10 03:42:37] 2026-03-10 07:42:02,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 03:42:37] 2026-03-10 07:42:02,429 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 03:42:37] 2026-03-10 07:42:02,429 | INFO     | update_server=False
[2026-03-10 03:42:37] 2026-03-10 07:42:02,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 03:42:37] 2026-03-10 07:42:02,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 03:42:37] 2026-03-10 07:42:02,437 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 03:42:37] 2026-03-10 07:42:02,438 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 03:42:37] 2026-03-10 07:42:02,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:42:37] 2026-03-10 07:42:02,438 | INFO     | will abort loop
[2026-03-10 03:42:37] 2026-03-10 07:42:02,713 | INFO     | all job control threads have been joined
[2026-03-10 03:42:37] 2026-03-10 07:42:03,299 | INFO     | all payload control threads have been joined
[2026-03-10 03:42:37] 2026-03-10 07:42:03,436 | INFO     | [job] retrieve thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:03,444 | INFO     | [job] job monitor thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:03,501 | INFO     | all data control threads have been joined
[2026-03-10 03:42:37] 2026-03-10 07:42:03,506 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:03,721 | INFO     | [job] control thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:03,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 03:42:37] 2026-03-10 07:42:04,020 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,199 | INFO     | [job] validate thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,277 | INFO     | [payload] validate_post thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,305 | INFO     | [payload] control thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,437 | INFO     | [data] copytool_out thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,507 | INFO     | [data] control thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,547 | INFO     | [payload] failed_post thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,548 | INFO     | [data] copytool_in thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,549 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:04,876 | INFO     | [job] queue monitor thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:05,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 03:42:37] 2026-03-10 07:42:09,219 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 03:42:37] 2026-03-10 07:42:26,791 | INFO     | [monitor] cgroup control has ended
[2026-03-10 03:42:37] 2026-03-10 07:42:28,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501498976064)>', '<ExcThread(monitor, started 140500786996992)>']
[2026-03-10 03:42:37] 2026-03-10 07:42:33,578 | INFO     | all workflow threads have been joined
[2026-03-10 03:42:37] 2026-03-10 07:42:33,579 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 03:42:37] 2026-03-10 07:42:33,579 | INFO     | traces error code: 0
[2026-03-10 03:42:37] 2026-03-10 07:42:33,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 03:42:37] 2026-03-10 07:42:34,986 | INFO     | PID=1669588 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 03:42:37] 2026-03-10 07:42:34,991 | INFO     | .. there are 36 such processes running
[2026-03-10 03:42:37] 2026-03-10 07:42:34,992 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 03:42:37] 2026-03-10 07:42:34,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 03:42:37] 2026-03-10 07:42:34,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 03:42:37] 2026-03-10 07:42:34,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 03:42:37] 2026-03-10 07:42:34,992 | INFO     | [monitor] control thread has ended
[2026-03-10 03:42:37] 2026-03-10 07:42:35,381 [wrapper] ==== pilot stdout END ====
[2026-03-10 03:42:37] 2026-03-10 07:42:35,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 03:42:37] 2026-03-10 07:42:35,428 [wrapper] pilotpid: 1669588
[2026-03-10 03:42:37] 2026-03-10 07:42:35,475 [wrapper] Pilot exit status: 0
[2026-03-10 03:42:37] 2026-03-10 07:42:35,603 [wrapper] pandaids: 7047461044
[2026-03-10 03:42:37] 2026-03-10 07:42:36,316 [wrapper] cleanup supervisor_pilot 3087617 1669589
[2026-03-10 03:42:37] 2026-03-10 07:42:36,363 [wrapper] Test setup, not cleaning
[2026-03-10 03:42:37] 2026-03-10 07:42:36,433 [wrapper] apfmon messages muted
[2026-03-10 03:42:37] 2026-03-10 07:42:36,459 [wrapper] ==== wrapper stdout END ====
[2026-03-10 03:42:37] 2026-03-10 07:42:36,474 [wrapper] ==== wrapper stderr END ====
[2026-03-10 03:42:37]  *** Error codes and diagnostics ***
[2026-03-10 03:42:37]     "exeErrorCode": 0,
[2026-03-10 03:42:37]     "exeErrorDiag": "",
[2026-03-10 03:42:37]     "pilotErrorCode": 0,
[2026-03-10 03:42:37]     "pilotErrorDiag": "",
[2026-03-10 03:42:37]  *** Listing of results directory ***
[2026-03-10 03:42:37] total 416648
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 10:53 pilot3.tar.gz
[2026-03-10 03:42:37] -rwx------. 1 boincer umatlas     36322 Mar  9 11:41 runpilot2-wrapper.sh
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 11:41 queuedata.json
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas       100 Mar  9 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 03:42:37] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 19:55 run_atlas
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas       105 Mar  9 19:55 job.xml
[2026-03-10 03:42:37] -rw-r--r--. 2 boincer umatlas 216190481 Mar  9 19:55 EVNT.48966985._000970.pool.root.1
[2026-03-10 03:42:37] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 19:55 start_atlas.sh
[2026-03-10 03:42:37] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 19:55 shared
[2026-03-10 03:42:37] -rw-r--r--. 2 boincer umatlas    597971 Mar  9 19:55 input.tar.gz
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas         0 Mar  9 19:55 boinc_lockfile
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas      2592 Mar  9 19:55 pandaJob.out
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas        57 Mar  9 19:55 setup.sh.local
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas   1002738 Mar  9 19:56 agis_schedconf.cvmfs.json
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas       438 Mar  9 19:56 workernode_map.json
[2026-03-10 03:42:37] drwx------. 5 boincer umatlas      4096 Mar  9 19:56 pilot3
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas      6876 Mar 10 03:36 init_data.xml
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas 198570774 Mar 10 03:40 HITS.48966988._024908.pool.root.1
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas       531 Mar 10 03:40 boinc_task_state.xml
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas      1045 Mar 10 03:41 memory_monitor_summary.json
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas   1511578 Mar 10 03:41 agis_ddmendpoints.agis.ALL.json
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas    621067 Mar 10 03:41 log.48966988._024908.job.log.tgz.1
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas      6394 Mar 10 03:41 heartbeat.json
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas      8192 Mar 10 03:42 boinc_mmap_file
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas        28 Mar 10 03:42 wrapper_checkpoint.txt
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas       823 Mar 10 03:42 pilotlog.txt
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas        95 Mar 10 03:42 pilot_heartbeat.json
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas   3356534 Mar 10 03:42 log.48966988._024908.job.log.1
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas       357 Mar 10 03:42 output.list
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas       620 Mar 10 03:42 runtime_log
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas   3993600 Mar 10 03:42 result.tar.gz
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas       657 Mar 10 03:42 UQ9MDmMurJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcrcLDm2VblJm.diag
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas      9347 Mar 10 03:42 runtime_log.err
[2026-03-10 03:42:37] -rw-r--r--. 1 boincer umatlas     21429 Mar 10 03:42 stderr.txt
[2026-03-10 03:42:37] HITS file was successfully produced:
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas 198570774 Mar 10 03:40 shared/HITS.pool.root.1
[2026-03-10 03:42:37]  *** Contents of shared directory: ***
[2026-03-10 03:42:37] total 409552
[2026-03-10 03:42:37] -rw-r--r--. 2 boincer umatlas 216190481 Mar  9 19:55 ATLAS.root_0
[2026-03-10 03:42:37] -rw-r--r--. 2 boincer umatlas     15845 Mar  9 19:55 start_atlas.sh
[2026-03-10 03:42:37] -rw-r--r--. 2 boincer umatlas    597971 Mar  9 19:55 input.tar.gz
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas 198570774 Mar 10 03:40 HITS.pool.root.1
[2026-03-10 03:42:37] -rw-------. 1 boincer umatlas   3993600 Mar 10 03:42 result.tar.gz
03:42:39 (1659943): run_atlas exited; CPU time 54607.187417
03:42:39 (1659943): called boinc_finish(0)

</stderr_txt>
]]>

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