Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:33 (3070940): wrapper (7.7.26015): starting
14:13:33 (3070940): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 14:13:33] Arguments: --nthreads 4
[2026-03-10 14:13:33] Threads: 4
[2026-03-10 14:13:33] Checking for CVMFS
[2026-03-10 14:13:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 14:13:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 14:13:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 14:13:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 14:13:34] 2.9.2.0 3074 17028 105160 157115 2 50 28987896 36864000 0 130560 0 7721339 99.985 634473 13525 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 14:13:34] CVMFS is ok
[2026-03-10 14:13:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 14:13:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 14:13:34] Further information can be found at the LHC@home message board.
[2026-03-10 14:13:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 14:13:34] Checking for apptainer binary...
[2026-03-10 14:13:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 14:13:34] Running /usr/bin/apptainer --version
[2026-03-10 14:13:34] apptainer version 1.4.1-1.1
[2026-03-10 14:13:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 14:13:34] thA314
[2026-03-10 14:13:34] apptainer works
[2026-03-10 14:13:34] Set ATHENA_PROC_NUMBER=4
[2026-03-10 14:13:34] Set ATHENA_CORE_NUMBER=4
[2026-03-10 14:13:34] Starting ATLAS job with PandaID=7047420034
[2026-03-10 14:13:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 15:44:58]  *** The last 200 lines of the pilot log: ***
[2026-03-10 15:44:58] 2026-03-10 14:44:19,027 | WARNING  | process 3079567 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 15:44:58] 2026-03-10 14:44:19,066 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 15:44:58] 2026-03-10 14:44:19,114 | INFO     | number of running child processes to parent process 3079567: 1
[2026-03-10 15:44:58] 2026-03-10 14:44:19,114 | INFO     | maximum number of monitored processes: 6
[2026-03-10 15:44:58] 2026-03-10 14:44:19,114 | INFO     | aborting job monitoring since job object (job id=7047420034) has expired
[2026-03-10 15:44:58] 2026-03-10 14:44:19,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 15:44:58] 2026-03-10 14:44:19,114 | INFO     | will abort loop
[2026-03-10 15:44:58] 2026-03-10 14:44:19,125 | INFO     | [data] copytool_out thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,158 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,316 | INFO     | [job] validate thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,478 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,494 | INFO     | [payload] validate_post thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,506 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,617 | INFO     | [data] copytool_in thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:19,621 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:20,119 | INFO     | [job] job monitor thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:20,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 15:44:58] 2026-03-10 14:44:24,360 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 15:44:58] 2026-03-10 14:44:47,972 | INFO     | PID=3075053 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 15:44:58] 2026-03-10 14:44:47,972 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 15:44:58] 2026-03-10 14:44:47,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 15:44:58] 2026-03-10 14:44:47,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 15:44:58] 2026-03-10 14:44:52,732 | INFO     | [monitor] cgroup control has ended
[2026-03-10 15:44:58] 2026-03-10 14:44:53,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720058169152)>', '<ExcThread(monitor, started 140719402497792)>']
[2026-03-10 15:44:58] 2026-03-10 14:44:54,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 15:44:58] 2026-03-10 14:44:54,003 | INFO     | [monitor] control thread has ended
[2026-03-10 15:44:58] 2026-03-10 14:44:58,118 | INFO     | all workflow threads have been joined
[2026-03-10 15:44:58] 2026-03-10 14:44:58,118 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 15:44:58] 2026-03-10 14:44:58,119 | INFO     | traces error code: 0
[2026-03-10 15:44:58] 2026-03-10 14:44:58,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 15:44:58] 2026-03-10 14:44:58,196 [wrapper] ==== pilot stdout END ====
[2026-03-10 15:44:58] 2026-03-10 14:44:58,200 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 15:44:58] 2026-03-10 14:44:58,205 [wrapper] pilotpid: 3075053
[2026-03-10 15:44:58] 2026-03-10 14:44:58,209 [wrapper] Pilot exit status: 0
[2026-03-10 15:44:58] 2026-03-10 14:44:58,220 [wrapper] pandaids: 7047420034
[2026-03-10 15:44:58] 2026-03-10 14:44:58,244 [wrapper] cleanup supervisor_pilot 3087362 3075054
[2026-03-10 15:44:58] 2026-03-10 14:44:58,248 [wrapper] Test setup, not cleaning
[2026-03-10 15:44:58] 2026-03-10 14:44:58,252 [wrapper] apfmon messages muted
[2026-03-10 15:44:58] 2026-03-10 14:44:58,255 [wrapper] ==== wrapper stdout END ====
[2026-03-10 15:44:58] 2026-03-10 14:44:58,259 [wrapper] ==== wrapper stderr END ====
[2026-03-10 15:44:58]  *** Error codes and diagnostics ***
[2026-03-10 15:44:58]     "exeErrorCode": 0,
[2026-03-10 15:44:58]     "exeErrorDiag": "",
[2026-03-10 15:44:58]     "pilotErrorCode": 0,
[2026-03-10 15:44:58]     "pilotErrorDiag": "",
[2026-03-10 15:44:58]  *** Listing of results directory ***
[2026-03-10 15:44:58] total 416144
[2026-03-10 15:44:58] -rwx------ 1 boinc boinc     36322 Mar  9 16:44 runpilot2-wrapper.sh
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc      5111 Mar  9 16:46 queuedata.json
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc    584627 Mar  9 16:46 pilot3.tar.gz
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc       100 Mar 10 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 15:44:58] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 14:13 run_atlas
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc       105 Mar 10 14:13 job.xml
[2026-03-10 15:44:58] -rw-r--r-- 2 boinc boinc 214078137 Mar 10 14:13 EVNT.48966985._000964.pool.root.1
[2026-03-10 15:44:58] -rw-r--r-- 2 boinc boinc    597971 Mar 10 14:13 input.tar.gz
[2026-03-10 15:44:58] -rw-r--r-- 2 boinc boinc     15845 Mar 10 14:13 start_atlas.sh
[2026-03-10 15:44:58] drwxrwx--x 2 boinc boinc      4096 Mar 10 14:13 shared
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc         0 Mar 10 14:13 boinc_setup_complete
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc      6376 Mar 10 14:13 init_data.xml
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc         0 Mar 10 14:13 boinc_lockfile
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc      2592 Mar 10 14:13 pandaJob.out
[2026-03-10 15:44:58] -rw------- 1 boinc boinc   1005423 Mar 10 14:13 agis_schedconf.cvmfs.json
[2026-03-10 15:44:58] -rw------- 1 boinc boinc   1511578 Mar 10 14:13 agis_ddmendpoints.agis.ALL.json
[2026-03-10 15:44:58] -rw------- 1 boinc boinc       427 Mar 10 14:13 workernode_map.json
[2026-03-10 15:44:58] drwx------ 5 boinc boinc      4096 Mar 10 14:13 pilot3
[2026-03-10 15:44:58] -rw------- 1 boinc boinc 205996922 Mar 10 15:43 HITS.48966988._024748.pool.root.1
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc       529 Mar 10 15:43 boinc_task_state.xml
[2026-03-10 15:44:58] -rw------- 1 boinc boinc      1018 Mar 10 15:44 memory_monitor_summary.json
[2026-03-10 15:44:58] -rw------- 1 boinc boinc        95 Mar 10 15:44 pilot_heartbeat.json
[2026-03-10 15:44:58] -rw------- 1 boinc boinc    276817 Mar 10 15:44 log.48966988._024748.job.log.tgz.1
[2026-03-10 15:44:58] -rw------- 1 boinc boinc      6312 Mar 10 15:44 heartbeat.json
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc        27 Mar 10 15:44 wrapper_checkpoint.txt
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc      8192 Mar 10 15:44 boinc_mmap_file
[2026-03-10 15:44:58] -rw------- 1 boinc boinc      5272 Mar 10 15:44 pilotlog.txt
[2026-03-10 15:44:58] -rw------- 1 boinc boinc    790689 Mar 10 15:44 log.48966988._024748.job.log.1
[2026-03-10 15:44:58] -rw------- 1 boinc boinc       357 Mar 10 15:44 output.list
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc       620 Mar 10 15:44 runtime_log
[2026-03-10 15:44:58] -rw------- 1 boinc boinc   1085440 Mar 10 15:44 result.tar.gz
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc      8896 Mar 10 15:44 runtime_log.err
[2026-03-10 15:44:58] -rw------- 1 boinc boinc       657 Mar 10 15:44 0aJODmIxrJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwHaLDmhjGvEm.diag
[2026-03-10 15:44:58] -rw-r--r-- 1 boinc boinc      6688 Mar 10 15:44 stderr.txt
[2026-03-10 15:44:58] HITS file was successfully produced:
[2026-03-10 15:44:58] -rw------- 1 boinc boinc 205996922 Mar 10 15:43 shared/HITS.pool.root.1
[2026-03-10 15:44:58]  *** Contents of shared directory: ***
[2026-03-10 15:44:58] total 411900
[2026-03-10 15:44:58] -rw-r--r-- 2 boinc boinc 214078137 Mar 10 14:13 ATLAS.root_0
[2026-03-10 15:44:58] -rw-r--r-- 2 boinc boinc    597971 Mar 10 14:13 input.tar.gz
[2026-03-10 15:44:58] -rw-r--r-- 2 boinc boinc     15845 Mar 10 14:13 start_atlas.sh
[2026-03-10 15:44:58] -rw------- 1 boinc boinc 205996922 Mar 10 15:43 HITS.pool.root.1
[2026-03-10 15:44:58] -rw------- 1 boinc boinc   1085440 Mar 10 15:44 result.tar.gz
15:44:59 (3070940): run_atlas exited; CPU time 20607.850191
15:44:59 (3070940): called boinc_finish(0)

</stderr_txt>
]]>

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