Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:08 (8402): wrapper (7.7.26015): starting
06:32:08 (8402): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 06:32:08] Arguments: --nthreads 4
[2026-03-10 06:32:08] Threads: 4
[2026-03-10 06:32:08] Checking for CVMFS
[2026-03-10 06:32:08] No cvmfs_config command found, will try listing directly
[2026-03-10 06:32:08] CVMFS is ok
[2026-03-10 06:32:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 06:32:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 06:32:08] Further information can be found at the LHC@home message board.
[2026-03-10 06:32:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 06:32:08] Checking for apptainer binary...
[2026-03-10 06:32:08] which: no apptainer in ((null))
[2026-03-10 06:32:08] apptainer is not installed, using version from CVMFS
[2026-03-10 06:32:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 06:32:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-10 06:32:08] apptainer works
[2026-03-10 06:32:08] Set ATHENA_PROC_NUMBER=4
[2026-03-10 06:32:08] Set ATHENA_CORE_NUMBER=4
[2026-03-10 06:32:08] Starting ATLAS job with PandaID=7047507007
[2026-03-10 06:32:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:31:37]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:31:37] 2026-03-10 07:30:42,010 | INFO     | mean y: 2321770.0172413792
[2026-03-10 08:31:37] 2026-03-10 07:30:42,010 | INFO     | intersect: -54792928448.568436
[2026-03-10 08:31:37] 2026-03-10 07:30:42,010 | INFO     | chi2: 1.3929756652961833
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | sum of square deviations: 424045160.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | sum of deviations: 14263710703.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | mean x: 1773124114.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | mean y: 2320006.4414414414
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | intersect: -59640689249.00954
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | chi2: 1.3950689015433377
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | current chi2=1.3950689015433377 (change=-0.15027084099917346 %)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | right removable region: 110
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | sum of square deviations: 424045160.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | sum of deviations: 435491749.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,011 | INFO     | mean x: 1773124419.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | mean y: 2357833.4954954954
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | intersect: -1818629946.2610729
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | chi2: 0.000784279264957189
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | current chi2=0.000784279264957189 (change=99.94369756166627 %)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | sum of square deviations: 369281342.5
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | sum of deviations: 28050362.000000007
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | mean x: 1773124571.5
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | mean y: 2358962.0188679243
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | intersect: -132326385.91925569
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | chi2: 0.0002827724239730723
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | current chi2=0.0002827724239730723 (change=63.94493178542623 %)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,012 | INFO     | sum of square deviations: 319447850.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | sum of deviations: -59857104.00000004
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | mean x: 1773124724.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | mean y: 2359229.792079208
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | intersect: 334601600.52470225
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | chi2: 0.0002509717206505728
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | current chi2=0.0002509717206505728 (change=11.246041207160916 %)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | left removable region: 30
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | sum of square deviations: 158737860.0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | sum of deviations: 16277606.000000024
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | mean x: 1773124998.5
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | mean y: 2358622.2
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | intersect: -179464605.8209248
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | chi2: 0.0001897927275596963
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | current memory leak: 0.10 B/s (using 80 data points, chi2=0.00)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,013 | INFO     | could have reported an average CPU frequency of 3623 MHz (7 samples)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | ..............................
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . Timing measurements:
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . get job = 0 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . initial setup = 4 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . payload setup = 4 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . stage-in = 0 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . payload execution = 7078 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . stage-out = 0 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | . log creation = 0 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,014 | INFO     | ..............................
[2026-03-10 08:31:37] 2026-03-10 07:30:42,059 | INFO     | 
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | job summary report
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | --------------------------------------------------
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | PanDA job id: 7047507007
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | task id: 48998012
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | errors: (none)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | pilot state: finished 
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | transexitcode: 0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | exeerrorcode: 0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | exeerrordiag: 
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | exitcode: 0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | exitmsg: OK
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | cpuconsumptiontime: 27365 s
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | nevents: 400
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | neventsw: 0
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | pid: 19002
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | pgrp: 19002
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | corecount: 4
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | event service: False
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | sizes: {0: 2279845, 1: 2280306, 11: 2280306, 7087: 2307580, 7089: 2316600, 7091: 2316656, 7092: 2316978}
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | --------------------------------------------------
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | 
[2026-03-10 08:31:37] 2026-03-10 07:30:42,060 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/7
[2026-03-10 08:31:37] 2026-03-10 07:30:42,079 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,079 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,079 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,079 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | job 7047507007 has completed (purged errors)
[2026-03-10 08:31:37] 2026-03-10 07:30:42,080 | INFO     | overall cleanup function is called
[2026-03-10 08:31:37] 2026-03-10 07:30:43,086 | INFO     | --- collectZombieJob: --- 10, [19002]
[2026-03-10 08:31:37] 2026-03-10 07:30:43,086 | INFO     | zombie collector waiting for pid 19002
[2026-03-10 08:31:37] 2026-03-10 07:30:43,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:31:37] 2026-03-10 07:30:43,086 | INFO     | collected zombie processes
[2026-03-10 08:31:37] 2026-03-10 07:30:43,086 | INFO     | will attempt to kill all subprocesses of pid=19002
[2026-03-10 08:31:37] 2026-03-10 07:30:44,347 | INFO     | process IDs to be killed: [19002] (in reverse order)
[2026-03-10 08:31:37] 2026-03-10 07:30:44,464 | WARNING  | process 19002 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 08:31:37] 2026-03-10 07:30:44,553 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:31:37] 2026-03-10 07:30:44,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:31:37] 2026-03-10 07:30:44,629 | INFO     | did not find any defunct processes belonging to 19002
[2026-03-10 08:31:37] 2026-03-10 07:30:44,705 | INFO     | did not find any defunct processes belonging to 19002
[2026-03-10 08:31:37] 2026-03-10 07:30:44,705 | INFO     | ready for new job
[2026-03-10 08:31:37] 2026-03-10 07:30:44,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:31:37] 2026-03-10 07:30:44,707 | INFO     | **************************************
[2026-03-10 08:31:37] 2026-03-10 07:30:44,707 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:31:37] 2026-03-10 07:30:44,707 | INFO     | **************************************
[2026-03-10 08:31:37] 2026-03-10 07:30:44,707 | INFO     | 
[2026-03-10 08:31:37] 2026-03-10 07:30:44,718 | INFO     | architecture information:
[2026-03-10 08:31:37] 2026-03-10 07:30:44,718 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:31:37] 2026-03-10 07:30:44,733 | INFO     | cat /etc/os-release:
[2026-03-10 08:31:37] NAME="CentOS Linux"
[2026-03-10 08:31:37] VERSION="7 (Core)"
[2026-03-10 08:31:37] ID="centos"
[2026-03-10 08:31:37] ID_LIKE="rhel fedora"
[2026-03-10 08:31:37] VERSION_ID="7"
[2026-03-10 08:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:31:37] ANSI_COLOR="0;31"
[2026-03-10 08:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:31:37] HOME_URL="https://www.centos.org/"
[2026-03-10 08:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:31:37] 
[2026-03-10 08:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:31:37] 
[2026-03-10 08:31:37] 2026-03-10 07:30:44,734 | INFO     | **************************************
[2026-03-10 08:31:37] 2026-03-10 07:30:44,876 | INFO     | using path: /var/lib/boinc/var/slot60/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:31:37] 2026-03-10 07:30:44,876 | INFO     | using path: /var/lib/boinc/var/slot60/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:31:37] 2026-03-10 07:30:44,877 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 08:31:37] 2026-03-10 07:30:44,877 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 08:31:37] 2026-03-10 07:30:44,877 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047507007/payload.stdout) since it has not been created yet
[2026-03-10 08:31:37] 2026-03-10 07:30:44,877 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/7
[2026-03-10 08:31:37] 2026-03-10 07:30:44,890 | INFO     | sufficient remaining disk space (20024655872 B)
[2026-03-10 08:31:37] 2026-03-10 07:30:44,890 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-10 08:31:37] 2026-03-10 07:30:44,890 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot60/slots/7/PanDA_Pilot-7047507007/HITS.48998012._001935.pool.root.1 since it does not exist
[2026-03-10 08:31:37] 2026-03-10 07:30:45,237 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/7
[2026-03-10 08:31:37] 2026-03-10 07:30:45,253 | INFO     | sufficient remaining disk space (20024655872 B)
[2026-03-10 08:31:37] 2026-03-10 07:30:45,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:31:37] 2026-03-10 07:30:45,253 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:31:37] 2026-03-10 07:30:45,253 | INFO     | update_server=False
[2026-03-10 08:31:37] 2026-03-10 07:30:45,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:31:37] 2026-03-10 07:30:45,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:31:37] 2026-03-10 07:30:45,305 | INFO     | number of running child processes to parent process 19002: 1
[2026-03-10 08:31:37] 2026-03-10 07:30:45,305 | INFO     | maximum number of monitored processes: 6
[2026-03-10 08:31:37] 2026-03-10 07:30:45,306 | INFO     | aborting job monitoring since job object (job id=7047507007) has expired
[2026-03-10 08:31:37] 2026-03-10 07:30:45,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:31:37] 2026-03-10 07:30:45,306 | INFO     | will abort loop
[2026-03-10 08:31:37] 2026-03-10 07:30:45,699 | INFO     | all data control threads have been joined
[2026-03-10 08:31:37] 2026-03-10 07:30:46,016 | INFO     | all job control threads have been joined
[2026-03-10 08:31:37] 2026-03-10 07:30:46,258 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:46,263 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:46,311 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:46,388 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:46,697 | INFO     | all payload control threads have been joined
[2026-03-10 08:31:37] 2026-03-10 07:30:46,704 | INFO     | [data] control thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:46,908 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,021 | INFO     | [job] control thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:31:37] 2026-03-10 07:30:47,219 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,248 | INFO     | [job] validate thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,259 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,331 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:31:37] 2026-03-10 07:30:47,493 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:47,702 | INFO     | [payload] control thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:48,074 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:51,357 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:30:55,782 | INFO     | job.realtimelogging is not enabled
[2026-03-10 08:31:37] 2026-03-10 07:30:56,788 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:31:37] 2026-03-10 07:31:14,166 | INFO     | PID=13165 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 08:31:37] 2026-03-10 07:31:14,166 | INFO     | .. there are 53 such processes running
[2026-03-10 08:31:37] 2026-03-10 07:31:14,166 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:31:37] 2026-03-10 07:31:14,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:31:37] 2026-03-10 07:31:14,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:31:37] 2026-03-10 07:31:30,638 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:31:37] 2026-03-10 07:31:32,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23007049332544)>', '<ExcThread(monitor, started 23006803130112)>']
[2026-03-10 08:31:37] 2026-03-10 07:31:33,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:31:37] 2026-03-10 07:31:33,260 | INFO     | [monitor] control thread has ended
[2026-03-10 08:31:37] 2026-03-10 07:31:37,458 | INFO     | all workflow threads have been joined
[2026-03-10 08:31:37] 2026-03-10 07:31:37,461 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:31:37] 2026-03-10 07:31:37,462 | INFO     | traces error code: 0
[2026-03-10 08:31:37] 2026-03-10 07:31:37,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:31:37] 2026-03-10 07:31:37,658 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:31:37] 2026-03-10 07:31:37,661 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:31:37] 2026-03-10 07:31:37,664 [wrapper] pilotpid: 13165
[2026-03-10 08:31:37] 2026-03-10 07:31:37,666 [wrapper] Pilot exit status: 0
[2026-03-10 08:31:37] 2026-03-10 07:31:37,674 [wrapper] pandaids: 7047507007
[2026-03-10 08:31:37] 2026-03-10 07:31:37,781 [wrapper] cleanup supervisor_pilot 1133120 13166
[2026-03-10 08:31:37] 2026-03-10 07:31:37,784 [wrapper] Test setup, not cleaning
[2026-03-10 08:31:37] 2026-03-10 07:31:37,786 [wrapper] apfmon messages muted
[2026-03-10 08:31:37] 2026-03-10 07:31:37,788 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:31:37] 2026-03-10 07:31:37,790 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:31:37]  *** Error codes and diagnostics ***
[2026-03-10 08:31:37]     "exeErrorCode": 0,
[2026-03-10 08:31:37]     "exeErrorDiag": "",
[2026-03-10 08:31:37]     "pilotErrorCode": 0,
[2026-03-10 08:31:37]     "pilotErrorDiag": "",
[2026-03-10 08:31:37]  *** Listing of results directory ***
[2026-03-10 08:31:37] total 603756
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:27 queuedata.json
[2026-03-10 08:31:37] -rwx------. 1 boinc boinc     36322 Mar  9 17:27 runpilot2-wrapper.sh
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc       100 Mar 10 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:31:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 06:32 run_atlas
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc       105 Mar 10 06:32 job.xml
[2026-03-10 08:31:37] -rw-r--r--. 2 boinc boinc 340473159 Mar 10 06:32 EVNT.48998009._000075.pool.root.1
[2026-03-10 08:31:37] -rw-r--r--. 2 boinc boinc     15845 Mar 10 06:32 start_atlas.sh
[2026-03-10 08:31:37] drwxrwx--x. 2 boinc boinc      4096 Mar 10 06:32 shared
[2026-03-10 08:31:37] -rw-r--r--. 2 boinc boinc    597972 Mar 10 06:32 input.tar.gz
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc      6705 Mar 10 06:32 init_data.xml
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc         0 Mar 10 06:32 boinc_lockfile
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc      2587 Mar 10 06:32 pandaJob.out
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc   1005073 Mar 10 06:32 agis_schedconf.cvmfs.json
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc   1511578 Mar 10 06:32 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc       443 Mar 10 06:32 workernode_map.json
[2026-03-10 08:31:37] drwx------. 5 boinc boinc      4096 Mar 10 06:32 pilot3
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc       529 Mar 10 08:30 boinc_task_state.xml
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc 271188155 Mar 10 08:30 HITS.48998012._001935.pool.root.1
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc      1031 Mar 10 08:30 memory_monitor_summary.json
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc    300544 Mar 10 08:30 log.48998012._001935.job.log.tgz.1
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc      6345 Mar 10 08:30 heartbeat.json
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc        95 Mar 10 08:31 pilot_heartbeat.json
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc      8192 Mar 10 08:31 boinc_mmap_file
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc        27 Mar 10 08:31 wrapper_checkpoint.txt
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc      6323 Mar 10 08:31 pilotlog.txt
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc   1019115 Mar 10 08:31 log.48998012._001935.job.log.1
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc       357 Mar 10 08:31 output.list
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc       620 Mar 10 08:31 runtime_log
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc   1341440 Mar 10 08:31 result.tar.gz
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc      9204 Mar 10 08:31 runtime_log.err
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc       663 Mar 10 08:31 rmdMDmTdsJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmO2cLDm6DCFYo.diag
[2026-03-10 08:31:37] -rw-r--r--. 1 boinc boinc     21253 Mar 10 08:31 stderr.txt
[2026-03-10 08:31:37] HITS file was successfully produced:
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc 271188155 Mar 10 08:30 shared/HITS.pool.root.1
[2026-03-10 08:31:37]  *** Contents of shared directory: ***
[2026-03-10 08:31:37] total 599252
[2026-03-10 08:31:37] -rw-r--r--. 2 boinc boinc 340473159 Mar 10 06:32 ATLAS.root_0
[2026-03-10 08:31:37] -rw-r--r--. 2 boinc boinc     15845 Mar 10 06:32 start_atlas.sh
[2026-03-10 08:31:37] -rw-r--r--. 2 boinc boinc    597972 Mar 10 06:32 input.tar.gz
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc 271188155 Mar 10 08:30 HITS.pool.root.1
[2026-03-10 08:31:37] -rw-------. 1 boinc boinc   1341440 Mar 10 08:31 result.tar.gz
08:31:39 (8402): run_atlas exited; CPU time 27646.277366
08:31:39 (8402): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN