Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:04 (2790310): wrapper (7.7.26015): starting
15:50:04 (2790310): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 15:50:04] Arguments: --nthreads 4
[2026-03-09 15:50:04] Threads: 4
[2026-03-09 15:50:04] Checking for CVMFS
[2026-03-09 15:50:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 15:50:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 15:50:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 15:50:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 15:50:07] 2.13.3.0 21737 10032 52184 157088 1 188 9064448 102400001 2748 130560 15 7124011 99.990 345834 89 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-09 15:50:07] CVMFS is ok
[2026-03-09 15:50:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 15:50:07] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-09 15:50:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-09 15:50:07] Further information can be found at the LHC@home message board.
[2026-03-09 15:50:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 15:50:07] Checking for apptainer binary...
[2026-03-09 15:50:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 15:50:07] Running /usr/bin/apptainer --version
[2026-03-09 15:50:07] apptainer version 1.4.5
[2026-03-09 15:50:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 15:50:07] T7810-Ubuntu
[2026-03-09 15:50:07] apptainer works
[2026-03-09 15:50:07] Set ATHENA_PROC_NUMBER=4
[2026-03-09 15:50:07] Set ATHENA_CORE_NUMBER=4
[2026-03-09 15:50:07] Starting ATLAS job with PandaID=7044912614
[2026-03-09 15:50:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:37:53]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:37:53] 2026-03-09 23:37:05,008 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/11/PanDA_Pilot-7044912614/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,009 | INFO     | extracted standard info from prmon json
[2026-03-09 19:37:53] 2026-03-09 23:37:05,009 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:37:53] 2026-03-09 23:37:05,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:37:53] 2026-03-09 23:37:05,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:37:53] 2026-03-09 23:37:05,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:37:53] 2026-03-09 23:37:05,014 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:37:53] 2026-03-09 23:37:05,014 | INFO     | sum of square deviations: 3438620752.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,016 | INFO     | sum of deviations: -10817925317.999996
[2026-03-09 19:37:53] 2026-03-09 23:37:05,016 | INFO     | mean x: 1773092619.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,016 | INFO     | mean y: 2312378.847533632
[2026-03-09 19:37:53] 2026-03-09 23:37:05,016 | INFO     | intersect: 5580474356.460999
[2026-03-09 19:37:53] 2026-03-09 23:37:05,016 | INFO     | chi2: 2.292321135801777
[2026-03-09 19:37:53] 2026-03-09 23:37:05,017 | INFO     | sum of square deviations: 3212467674.5
[2026-03-09 19:37:53] 2026-03-09 23:37:05,018 | INFO     | sum of deviations: 3598613351.500011
[2026-03-09 19:37:53] 2026-03-09 23:37:05,018 | INFO     | mean x: 1773092466.5
[2026-03-09 19:37:53] 2026-03-09 23:37:05,018 | INFO     | mean y: 2321927.1146788993
[2026-03-09 19:37:53] 2026-03-09 23:37:05,019 | INFO     | intersect: -1983900151.9554543
[2026-03-09 19:37:53] 2026-03-09 23:37:05,019 | INFO     | chi2: 1.4652868732123703
[2026-03-09 19:37:53] 2026-03-09 23:37:05,019 | INFO     | current chi2=1.4652868732123703 (change=36.07846429859567 %)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,019 | INFO     | sum of square deviations: 2996454322.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,021 | INFO     | sum of deviations: 3642082286.9999995
[2026-03-09 19:37:53] 2026-03-09 23:37:05,021 | INFO     | mean x: 1773092314.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,021 | INFO     | mean y: 2321957.8309859154
[2026-03-09 19:37:53] 2026-03-09 23:37:05,021 | INFO     | intersect: -2152807877.6623783
[2026-03-09 19:37:53] 2026-03-09 23:37:05,021 | INFO     | chi2: 1.465716265381764
[2026-03-09 19:37:53] 2026-03-09 23:37:05,022 | INFO     | current chi2=1.465716265381764 (change=-0.029304307384688144 %)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,022 | INFO     | right removable region: 212
[2026-03-09 19:37:53] 2026-03-09 23:37:05,022 | INFO     | sum of square deviations: 3212467674.5
[2026-03-09 19:37:53] 2026-03-09 23:37:05,023 | INFO     | sum of deviations: -38834032066.49999
[2026-03-09 19:37:53] 2026-03-09 23:37:05,023 | INFO     | mean x: 1773092771.5
[2026-03-09 19:37:53] 2026-03-09 23:37:05,024 | INFO     | mean y: 2331040.839449541
[2026-03-09 19:37:53] 2026-03-09 23:37:05,024 | INFO     | intersect: 21436427356.229576
[2026-03-09 19:37:53] 2026-03-09 23:37:05,024 | INFO     | chi2: 0.9480590290211954
[2026-03-09 19:37:53] 2026-03-09 23:37:05,024 | INFO     | current chi2=0.9480590290211954 (change=58.641962759306146 %)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,024 | INFO     | sum of square deviations: 2996454322.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,025 | INFO     | sum of deviations: -35274082101.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,026 | INFO     | mean x: 1773092924.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,026 | INFO     | mean y: 2328514.4037558683
[2026-03-09 19:37:53] 2026-03-09 23:37:05,026 | INFO     | intersect: 20875072982.650032
[2026-03-09 19:37:53] 2026-03-09 23:37:05,026 | INFO     | chi2: 0.9437565739091862
[2026-03-09 19:37:53] 2026-03-09 23:37:05,026 | INFO     | current chi2=0.9437565739091862 (change=0.4538172181590003 %)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,026 | INFO     | left removable region: 20
[2026-03-09 19:37:53] 2026-03-09 23:37:05,027 | INFO     | sum of square deviations: 2194675568.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | sum of deviations: -11287236260.0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | mean x: 1773092893.5
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | mean y: 2331838.78125
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | intersect: 9121364597.732306
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | chi2: 0.07273937735260189
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | current memory leak: -5.14 B/s (using 192 data points, chi2=0.07)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,028 | INFO     | could have reported an average CPU frequency of 2778 MHz (11 samples)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | ..............................
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . Timing measurements:
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . get job = 0 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . initial setup = 7 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . payload setup = 5 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . stage-in = 0 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . payload execution = 13574 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . stage-out = 3 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | . log creation = 0 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,029 | INFO     | ..............................
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | 
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | job summary report
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | --------------------------------------------------
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | PanDA job id: 7044912614
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | task id: 48966988
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | errors: (none)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,090 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | pilot state: finished 
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | transexitcode: 0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | exeerrorcode: 0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | exeerrordiag: 
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | exitcode: 0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | exitmsg: OK
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | cpuconsumptiontime: 53134 s
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | nevents: 400
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | neventsw: 0
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | pid: 2799474
[2026-03-09 19:37:53] 2026-03-09 23:37:05,091 | INFO     | pgrp: 2799474
[2026-03-09 19:37:53] 2026-03-09 23:37:05,092 | INFO     | corecount: 4
[2026-03-09 19:37:53] 2026-03-09 23:37:05,092 | INFO     | event service: False
[2026-03-09 19:37:53] 2026-03-09 23:37:05,092 | INFO     | sizes: {0: 2279856, 1: 2280260, 11: 2280260, 13584: 2310553, 13587: 2319637, 13588: 2319775}
[2026-03-09 19:37:53] 2026-03-09 23:37:05,092 | INFO     | --------------------------------------------------
[2026-03-09 19:37:53] 2026-03-09 23:37:05,092 | INFO     | 
[2026-03-09 19:37:53] 2026-03-09 23:37:05,092 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/11
[2026-03-09 19:37:53] 2026-03-09 23:37:05,115 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:37:53] 2026-03-09 23:37:05,118 | INFO     | job 7044912614 has completed (purged errors)
[2026-03-09 19:37:53] 2026-03-09 23:37:05,118 | INFO     | overall cleanup function is called
[2026-03-09 19:37:53] 2026-03-09 23:37:05,564 | INFO     | PID=2794689 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 19:37:53] 2026-03-09 23:37:05,565 | INFO     | .. there are 4 such processes running
[2026-03-09 19:37:53] 2026-03-09 23:37:06,126 | INFO     | --- collectZombieJob: --- 10, [2799474]
[2026-03-09 19:37:53] 2026-03-09 23:37:06,126 | INFO     | zombie collector waiting for pid 2799474
[2026-03-09 19:37:53] 2026-03-09 23:37:06,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:37:53] 2026-03-09 23:37:06,127 | INFO     | collected zombie processes
[2026-03-09 19:37:53] 2026-03-09 23:37:06,127 | INFO     | will attempt to kill all subprocesses of pid=2799474
[2026-03-09 19:37:53] 2026-03-09 23:37:06,485 | INFO     | process IDs to be killed: [2799474] (in reverse order)
[2026-03-09 19:37:53] 2026-03-09 23:37:06,588 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:37:53] 2026-03-09 23:37:06,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:37:53] 2026-03-09 23:37:06,598 | INFO     | did not find any defunct processes belonging to 2799474
[2026-03-09 19:37:53] 2026-03-09 23:37:06,607 | INFO     | did not find any defunct processes belonging to 2799474
[2026-03-09 19:37:53] 2026-03-09 23:37:06,607 | INFO     | ready for new job
[2026-03-09 19:37:53] 2026-03-09 23:37:06,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:37:53] 2026-03-09 23:37:06,610 | INFO     | **************************************
[2026-03-09 19:37:53] 2026-03-09 23:37:06,610 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:37:53] 2026-03-09 23:37:06,610 | INFO     | **************************************
[2026-03-09 19:37:53] 2026-03-09 23:37:06,610 | INFO     | 
[2026-03-09 19:37:53] 2026-03-09 23:37:06,615 | INFO     | architecture information:
[2026-03-09 19:37:53] 2026-03-09 23:37:06,615 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:37:53] 2026-03-09 23:37:06,634 | INFO     | cat /etc/os-release:
[2026-03-09 19:37:53] NAME="CentOS Linux"
[2026-03-09 19:37:53] VERSION="7 (Core)"
[2026-03-09 19:37:53] ID="centos"
[2026-03-09 19:37:53] ID_LIKE="rhel fedora"
[2026-03-09 19:37:53] VERSION_ID="7"
[2026-03-09 19:37:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:37:53] ANSI_COLOR="0;31"
[2026-03-09 19:37:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:37:53] HOME_URL="https://www.centos.org/"
[2026-03-09 19:37:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:37:53] 
[2026-03-09 19:37:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:37:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:37:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:37:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:37:53] 
[2026-03-09 19:37:53] 2026-03-09 23:37:06,634 | INFO     | **************************************
[2026-03-09 19:37:53] 2026-03-09 23:37:07,137 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/11
[2026-03-09 19:37:53] 2026-03-09 23:37:07,152 | INFO     | sufficient remaining disk space (398950662144 B)
[2026-03-09 19:37:53] 2026-03-09 23:37:07,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:37:53] 2026-03-09 23:37:07,153 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:37:53] 2026-03-09 23:37:07,153 | INFO     | update_server=False
[2026-03-09 19:37:53] 2026-03-09 23:37:07,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:37:53] 2026-03-09 23:37:07,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:37:53] 2026-03-09 23:37:07,178 | INFO     | all payload control threads have been joined
[2026-03-09 19:37:53] 2026-03-09 23:37:07,259 | INFO     | all job control threads have been joined
[2026-03-09 19:37:53] 2026-03-09 23:37:07,331 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-09 19:37:53] 2026-03-09 23:37:07,331 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-09 19:37:53] 2026-03-09 23:37:07,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:37:53] 2026-03-09 23:37:07,331 | INFO     | will abort loop
[2026-03-09 19:37:53] 2026-03-09 23:37:07,577 | INFO     | all data control threads have been joined
[2026-03-09 19:37:53] 2026-03-09 23:37:08,158 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,183 | INFO     | [payload] control thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,234 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,264 | INFO     | [job] control thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,332 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,337 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,583 | INFO     | [data] control thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:08,599 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:09,054 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:09,117 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:09,121 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:09,168 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:09,318 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:09,601 | INFO     | [job] validate thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:10,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:37:53] 2026-03-09 23:37:10,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:37:53] 2026-03-09 23:37:11,105 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:14,400 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:37:53] 2026-03-09 23:37:38,019 | INFO     | PID=2794689 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 19:37:53] 2026-03-09 23:37:38,019 | INFO     | .. there are 4 such processes running
[2026-03-09 19:37:53] 2026-03-09 23:37:38,020 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:37:53] 2026-03-09 23:37:38,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:37:53] 2026-03-09 23:37:38,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:37:53] 2026-03-09 23:37:47,495 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:37:53] 2026-03-09 23:37:48,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131363608160064)>', '<ExcThread(monitor, started 131362824636160)>']
[2026-03-09 19:37:53] 2026-03-09 23:37:49,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:37:53] 2026-03-09 23:37:49,075 | INFO     | [monitor] control thread has ended
[2026-03-09 19:37:53] 2026-03-09 23:37:53,161 | INFO     | all workflow threads have been joined
[2026-03-09 19:37:53] 2026-03-09 23:37:53,161 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:37:53] 2026-03-09 23:37:53,161 | INFO     | traces error code: 0
[2026-03-09 19:37:53] 2026-03-09 23:37:53,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:37:53] 2026-03-09 23:37:53,325 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:37:53] 2026-03-09 23:37:53,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:37:53] 2026-03-09 23:37:53,330 [wrapper] pilotpid: 2794689
[2026-03-09 19:37:53] 2026-03-09 23:37:53,333 [wrapper] Pilot exit status: 0
[2026-03-09 19:37:53] 2026-03-09 23:37:53,349 [wrapper] pandaids: 7044912614
[2026-03-09 19:37:53] 2026-03-09 23:37:53,399 [wrapper] cleanup supervisor_pilot 2854335 2794690
[2026-03-09 19:37:53] 2026-03-09 23:37:53,401 [wrapper] Test setup, not cleaning
[2026-03-09 19:37:53] 2026-03-09 23:37:53,408 [wrapper] apfmon messages muted
[2026-03-09 19:37:53] 2026-03-09 23:37:53,411 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:37:53] 2026-03-09 23:37:53,414 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:37:53]  *** Error codes and diagnostics ***
[2026-03-09 19:37:53]     "exeErrorCode": 0,
[2026-03-09 19:37:53]     "exeErrorDiag": "",
[2026-03-09 19:37:53]     "pilotErrorCode": 0,
[2026-03-09 19:37:53]     "pilotErrorDiag": "",
[2026-03-09 19:37:53]  *** Listing of results directory ***
[2026-03-09 19:37:53] total 405496
[2026-03-09 19:37:53] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 06:17 queuedata.json
[2026-03-09 19:37:53] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 06:17 runpilot2-wrapper.sh
[2026-03-09 19:37:53] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 06:18 pilot3.tar.gz
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  9 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:37:53] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  9 15:50 run_atlas
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  9 15:50 job.xml
[2026-03-09 19:37:53] -rw-r--r-- 2 whitlerd whitlerd 211296771 Mar  9 15:50 EVNT.48966985._000420.pool.root.1
[2026-03-09 19:37:53] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 15:50 start_atlas.sh
[2026-03-09 19:37:53] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  9 15:50 shared
[2026-03-09 19:37:53] -rw-r--r-- 2 whitlerd whitlerd    597978 Mar  9 15:50 input.tar.gz
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd      9127 Mar  9 15:50 init_data.xml
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 15:50 boinc_setup_complete
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  9 15:50 boinc_lockfile
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd      2590 Mar  9 15:50 pandaJob.out
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd   1002746 Mar  9 15:50 agis_schedconf.cvmfs.json
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd       433 Mar  9 15:50 workernode_map.json
[2026-03-09 19:37:53] drwx------ 5 whitlerd whitlerd      4096 Mar  9 15:50 pilot3
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd 195319745 Mar  9 19:36 HITS.48966988._013985.pool.root.1
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar  9 19:36 boinc_task_state.xml
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd      1030 Mar  9 19:36 memory_monitor_summary.json
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd   1511578 Mar  9 19:37 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd    398453 Mar  9 19:37 log.48966988._013985.job.log.tgz.1
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd      6337 Mar  9 19:37 heartbeat.json
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd        95 Mar  9 19:37 pilot_heartbeat.json
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  9 19:37 boinc_mmap_file
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar  9 19:37 wrapper_checkpoint.txt
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd      5021 Mar  9 19:37 pilotlog.txt
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd   1935580 Mar  9 19:37 log.48966988._013985.job.log.1
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd       357 Mar  9 19:37 output.list
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  9 19:37 runtime_log
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd   2355200 Mar  9 19:37 result.tar.gz
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd      9036 Mar  9 19:37 runtime_log.err
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd       650 Mar  9 19:37 L83MDmFq4I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKdVLDmKui8om.diag
[2026-03-09 19:37:53] -rw-rw-r-- 1 whitlerd whitlerd     21260 Mar  9 19:37 stderr.txt
[2026-03-09 19:37:53] HITS file was successfully produced:
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd 195319745 Mar  9 19:36 shared/HITS.pool.root.1
[2026-03-09 19:37:53]  *** Contents of shared directory: ***
[2026-03-09 19:37:53] total 400000
[2026-03-09 19:37:53] -rw-r--r-- 2 whitlerd whitlerd 211296771 Mar  9 15:50 ATLAS.root_0
[2026-03-09 19:37:53] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  9 15:50 start_atlas.sh
[2026-03-09 19:37:53] -rw-r--r-- 2 whitlerd whitlerd    597978 Mar  9 15:50 input.tar.gz
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd 195319745 Mar  9 19:36 HITS.pool.root.1
[2026-03-09 19:37:53] -rw------- 1 whitlerd whitlerd   2355200 Mar  9 19:37 result.tar.gz
19:37:54 (2790310): run_atlas exited; CPU time 53676.437234
19:37:54 (2790310): called boinc_finish(0)

</stderr_txt>
]]>

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