Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:06 (2998393): wrapper (7.7.26015): starting
09:43:06 (2998393): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 09:43:06] Arguments: --nthreads 4
[2026-03-10 09:43:06] Threads: 4
[2026-03-10 09:43:06] Checking for CVMFS
[2026-03-10 09:43:06] No cvmfs_config command found, will try listing directly
[2026-03-10 09:43:06] CVMFS is ok
[2026-03-10 09:43:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 09:43:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 09:43:06] Further information can be found at the LHC@home message board.
[2026-03-10 09:43:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 09:43:06] Checking for apptainer binary...
[2026-03-10 09:43:06] which: no apptainer in ((null))
[2026-03-10 09:43:06] apptainer is not installed, using version from CVMFS
[2026-03-10 09:43:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 09:43:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-10 09:43:06] apptainer works
[2026-03-10 09:43:06] Set ATHENA_PROC_NUMBER=4
[2026-03-10 09:43:06] Set ATHENA_CORE_NUMBER=4
[2026-03-10 09:43:06] Starting ATLAS job with PandaID=7047486394
[2026-03-10 09:43:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 11:45:36]  *** The last 200 lines of the pilot log: ***
[2026-03-10 11:45:36] 2026-03-10 10:44:37,636 | INFO     | total number of processed events: 400 (read)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,655 | INFO     | using path: /var/lib/boinc/var/slot32/slots/8/PanDA_Pilot-7047486394/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,655 | INFO     | extracted standard info from prmon json
[2026-03-10 11:45:36] 2026-03-10 10:44:37,655 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 11:45:36] 2026-03-10 10:44:37,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 11:45:36] 2026-03-10 10:44:37,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 11:45:36] 2026-03-10 10:44:37,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 11:45:36] 2026-03-10 10:44:37,657 | INFO     | fitting pss+swap vs Time
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | sum of square deviations: 522502820.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | sum of deviations: 13041698495.999998
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | mean x: 1773135818.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | mean y: 2328343.5462184874
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | intersect: -44255237062.156906
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | chi2: 1.1156881204674702
[2026-03-10 11:45:36] 2026-03-10 10:44:37,658 | INFO     | sum of square deviations: 459366752.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,659 | INFO     | sum of deviations: 12369326087.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,659 | INFO     | mean x: 1773135665.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,659 | INFO     | mean y: 2326718.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,659 | INFO     | intersect: -47742733463.98638
[2026-03-10 11:45:36] 2026-03-10 10:44:37,659 | INFO     | chi2: 1.1171391518167222
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | current chi2=1.1171391518167222 (change=-0.13005707622341395 %)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | right removable region: 113
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | sum of square deviations: 459366752.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | sum of deviations: 1212266542.0000002
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | mean x: 1773135970.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | mean y: 2356163.8421052634
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | intersect: -4676940715.515417
[2026-03-10 11:45:36] 2026-03-10 10:44:37,662 | INFO     | chi2: 0.0007605000281109513
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | current chi2=0.0007605000281109513 (change=99.93183578688708 %)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | sum of square deviations: 401533110.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | sum of deviations: 770462147.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | mean x: 1773136123.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | mean y: 2357320.23853211
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | intersect: -3399938107.5279007
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | chi2: 0.00039689367048284925
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | current chi2=0.00039689367048284925 (change=47.81148510030753 %)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | sum of square deviations: 348769330.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,663 | INFO     | sum of deviations: 688143257.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | mean x: 1773136275.5
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | mean y: 2357552.403846154
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | intersect: -3496148958.267317
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | chi2: 0.00036620319272321874
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | current chi2=0.00036620319272321874 (change=7.73266999251799 %)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | left removable region: 30
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | sum of square deviations: 177275882.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | sum of deviations: 648038989.9999996
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | mean x: 1773136550.0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | mean y: 2356604.060240964
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | intersect: -6479414102.877118
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | chi2: 7.471988704393296e-05
[2026-03-10 11:45:36] 2026-03-10 10:44:37,664 | INFO     | current memory leak: 3.66 B/s (using 83 data points, chi2=0.00)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | could have reported an average CPU frequency of 3584 MHz (8 samples)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | ..............................
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . Timing measurements:
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . get job = 0 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . initial setup = 4 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . payload setup = 5 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . stage-in = 0 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . payload execution = 7258 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . stage-out = 0 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | . log creation = 0 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,665 | INFO     | ..............................
[2026-03-10 11:45:36] 2026-03-10 10:44:37,701 | INFO     | 
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | job summary report
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | --------------------------------------------------
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | PanDA job id: 7047486394
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | task id: 48998032
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | errors: (none)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | pilot state: finished 
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | transexitcode: 0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | exeerrorcode: 0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | exeerrordiag: 
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | exitcode: 0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | exitmsg: OK
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | cpuconsumptiontime: 28005 s
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | nevents: 400
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | neventsw: 0
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | pid: 3008671
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | pgrp: 3008671
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | corecount: 4
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | event service: False
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | sizes: {0: 2279864, 1: 2280268, 11: 2280268, 7267: 2307646, 7268: 2316860}
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | --------------------------------------------------
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | 
[2026-03-10 11:45:36] 2026-03-10 10:44:37,702 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/8
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,716 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,716 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 11:45:36] 2026-03-10 10:44:37,716 | INFO     | job 7047486394 has completed (purged errors)
[2026-03-10 11:45:36] 2026-03-10 10:44:37,716 | INFO     | overall cleanup function is called
[2026-03-10 11:45:36] 2026-03-10 10:44:38,723 | INFO     | --- collectZombieJob: --- 10, [3008671]
[2026-03-10 11:45:36] 2026-03-10 10:44:38,724 | INFO     | zombie collector waiting for pid 3008671
[2026-03-10 11:45:36] 2026-03-10 10:44:38,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 11:45:36] 2026-03-10 10:44:38,724 | INFO     | collected zombie processes
[2026-03-10 11:45:36] 2026-03-10 10:44:38,724 | INFO     | will attempt to kill all subprocesses of pid=3008671
[2026-03-10 11:45:36] 2026-03-10 10:44:39,167 | INFO     | process IDs to be killed: [3008671] (in reverse order)
[2026-03-10 11:45:36] 2026-03-10 10:44:39,382 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 11:45:36] 2026-03-10 10:44:39,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 11:45:36] 2026-03-10 10:44:39,408 | INFO     | did not find any defunct processes belonging to 3008671
[2026-03-10 11:45:36] 2026-03-10 10:44:39,432 | INFO     | did not find any defunct processes belonging to 3008671
[2026-03-10 11:45:36] 2026-03-10 10:44:39,432 | INFO     | ready for new job
[2026-03-10 11:45:36] 2026-03-10 10:44:39,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 11:45:36] 2026-03-10 10:44:39,434 | INFO     | **************************************
[2026-03-10 11:45:36] 2026-03-10 10:44:39,434 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 11:45:36] 2026-03-10 10:44:39,434 | INFO     | **************************************
[2026-03-10 11:45:36] 2026-03-10 10:44:39,434 | INFO     | 
[2026-03-10 11:45:36] 2026-03-10 10:44:39,440 | INFO     | architecture information:
[2026-03-10 11:45:36] 2026-03-10 10:44:39,440 | INFO     | executing command: cat /etc/os-release
[2026-03-10 11:45:36] 2026-03-10 10:44:39,456 | INFO     | cat /etc/os-release:
[2026-03-10 11:45:36] NAME="CentOS Linux"
[2026-03-10 11:45:36] VERSION="7 (Core)"
[2026-03-10 11:45:36] ID="centos"
[2026-03-10 11:45:36] ID_LIKE="rhel fedora"
[2026-03-10 11:45:36] VERSION_ID="7"
[2026-03-10 11:45:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 11:45:36] ANSI_COLOR="0;31"
[2026-03-10 11:45:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 11:45:36] HOME_URL="https://www.centos.org/"
[2026-03-10 11:45:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 11:45:36] 
[2026-03-10 11:45:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 11:45:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 11:45:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 11:45:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 11:45:36] 
[2026-03-10 11:45:36] 2026-03-10 10:44:39,456 | INFO     | **************************************
[2026-03-10 11:45:36] 2026-03-10 10:44:39,959 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/8
[2026-03-10 11:45:36] 2026-03-10 10:44:39,974 | INFO     | sufficient remaining disk space (20409483264 B)
[2026-03-10 11:45:36] 2026-03-10 10:44:39,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 11:45:36] 2026-03-10 10:44:39,974 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 11:45:36] 2026-03-10 10:44:39,974 | INFO     | update_server=False
[2026-03-10 11:45:36] 2026-03-10 10:44:39,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 11:45:36] 2026-03-10 10:44:40,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 11:45:36] 2026-03-10 10:44:40,257 | INFO     | job.realtimelogging is not enabled
[2026-03-10 11:45:36] 2026-03-10 10:44:40,395 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-10 11:45:36] 2026-03-10 10:44:40,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-10 11:45:36] 2026-03-10 10:44:40,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:45:36] 2026-03-10 10:44:40,396 | INFO     | will abort loop
[2026-03-10 11:45:36] 2026-03-10 10:44:40,520 | INFO     | all data control threads have been joined
[2026-03-10 11:45:36] 2026-03-10 10:44:40,980 | INFO     | [job] retrieve thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,097 | INFO     | all payload control threads have been joined
[2026-03-10 11:45:36] 2026-03-10 10:44:41,262 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,303 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,306 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,401 | INFO     | [job] job monitor thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,424 | INFO     | all job control threads have been joined
[2026-03-10 11:45:36] 2026-03-10 10:44:41,443 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,525 | INFO     | [data] control thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,740 | INFO     | [data] copytool_in thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:41,760 | INFO     | [payload] failed_post thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:42,103 | INFO     | [payload] control thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:42,167 | INFO     | [data] copytool_out thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:42,305 | INFO     | [payload] validate_post thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:42,430 | INFO     | [job] control thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:42,434 | INFO     | [job] validate thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:42,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:45:36] 2026-03-10 10:44:43,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 11:45:36] 2026-03-10 10:44:43,718 | INFO     | [job] queue monitor thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:44:47,222 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 11:45:36] 2026-03-10 10:45:09,368 | INFO     | PID=3002919 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 11:45:36] 2026-03-10 10:45:09,368 | INFO     | .. there are 59 such processes running
[2026-03-10 11:45:36] 2026-03-10 10:45:09,368 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 11:45:36] 2026-03-10 10:45:09,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 11:45:36] 2026-03-10 10:45:09,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 11:45:36] 2026-03-10 10:45:30,176 | INFO     | [monitor] cgroup control has ended
[2026-03-10 11:45:36] 2026-03-10 10:45:30,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22625261381440)>', '<ExcThread(monitor, started 22625022916352)>']
[2026-03-10 11:45:36] 2026-03-10 10:45:31,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 11:45:36] 2026-03-10 10:45:31,487 | INFO     | [monitor] control thread has ended
[2026-03-10 11:45:36] 2026-03-10 10:45:35,792 | INFO     | all workflow threads have been joined
[2026-03-10 11:45:36] 2026-03-10 10:45:35,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 11:45:36] 2026-03-10 10:45:35,792 | INFO     | traces error code: 0
[2026-03-10 11:45:36] 2026-03-10 10:45:35,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 11:45:36] 2026-03-10 10:45:35,953 [wrapper] ==== pilot stdout END ====
[2026-03-10 11:45:36] 2026-03-10 10:45:35,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 11:45:36] 2026-03-10 10:45:35,958 [wrapper] pilotpid: 3002919
[2026-03-10 11:45:36] 2026-03-10 10:45:35,960 [wrapper] Pilot exit status: 0
[2026-03-10 11:45:36] 2026-03-10 10:45:35,970 [wrapper] pandaids: 7047486394
[2026-03-10 11:45:36] 2026-03-10 10:45:36,098 [wrapper] cleanup supervisor_pilot  119774 3002920
[2026-03-10 11:45:36] 2026-03-10 10:45:36,102 [wrapper] Test setup, not cleaning
[2026-03-10 11:45:36] 2026-03-10 10:45:36,108 [wrapper] apfmon messages muted
[2026-03-10 11:45:36] 2026-03-10 10:45:36,112 [wrapper] ==== wrapper stdout END ====
[2026-03-10 11:45:36] 2026-03-10 10:45:36,114 [wrapper] ==== wrapper stderr END ====
[2026-03-10 11:45:36]  *** Error codes and diagnostics ***
[2026-03-10 11:45:36]     "exeErrorCode": 0,
[2026-03-10 11:45:36]     "exeErrorDiag": "",
[2026-03-10 11:45:36]     "pilotErrorCode": 0,
[2026-03-10 11:45:36]     "pilotErrorDiag": "",
[2026-03-10 11:45:36]  *** Listing of results directory ***
[2026-03-10 11:45:36] total 637064
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc      5111 Mar  9 17:24 queuedata.json
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc    584627 Mar  9 17:24 pilot3.tar.gz
[2026-03-10 11:45:36] -rwx------. 1 boinc boinc     36322 Mar  9 17:24 runpilot2-wrapper.sh
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc       100 Mar 10 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 11:45:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 09:43 run_atlas
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc       105 Mar 10 09:43 job.xml
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc      6705 Mar 10 09:43 init_data.xml
[2026-03-10 11:45:36] -rw-r--r--. 2 boinc boinc 362222832 Mar 10 09:43 EVNT.48998030._000030.pool.root.1
[2026-03-10 11:45:36] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:43 start_atlas.sh
[2026-03-10 11:45:36] drwxrwx--x. 2 boinc boinc      4096 Mar 10 09:43 shared
[2026-03-10 11:45:36] -rw-r--r--. 2 boinc boinc    597939 Mar 10 09:43 input.tar.gz
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc         0 Mar 10 09:43 boinc_lockfile
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc      2559 Mar 10 09:43 pandaJob.out
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc   1005073 Mar 10 09:43 agis_schedconf.cvmfs.json
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc   1511578 Mar 10 09:43 agis_ddmendpoints.agis.ALL.json
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc       443 Mar 10 09:43 workernode_map.json
[2026-03-10 11:45:36] drwx------. 5 boinc boinc      4096 Mar 10 09:43 pilot3
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc 283452534 Mar 10 11:44 HITS.48998032._000749.pool.root.1
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc       530 Mar 10 11:44 boinc_task_state.xml
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc      1031 Mar 10 11:44 memory_monitor_summary.json
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc    319652 Mar 10 11:44 log.48998032._000749.job.log.tgz.1
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc      6350 Mar 10 11:44 heartbeat.json
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc        95 Mar 10 11:45 pilot_heartbeat.json
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc      8192 Mar 10 11:45 boinc_mmap_file
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc        27 Mar 10 11:45 wrapper_checkpoint.txt
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc      5087 Mar 10 11:45 pilotlog.txt
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc   1049135 Mar 10 11:45 log.48998032._000749.job.log.1
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc       357 Mar 10 11:45 output.list
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc       620 Mar 10 11:45 runtime_log
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc   1382400 Mar 10 11:45 result.tar.gz
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc      9204 Mar 10 11:45 runtime_log.err
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc       663 Mar 10 11:45 firKDmfasJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyLaLDmlkREqn.diag
[2026-03-10 11:45:36] -rw-r--r--. 1 boinc boinc     20792 Mar 10 11:45 stderr.txt
[2026-03-10 11:45:36] HITS file was successfully produced:
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc 283452534 Mar 10 11:44 shared/HITS.pool.root.1
[2026-03-10 11:45:36]  *** Contents of shared directory: ***
[2026-03-10 11:45:36] total 632508
[2026-03-10 11:45:36] -rw-r--r--. 2 boinc boinc 362222832 Mar 10 09:43 ATLAS.root_0
[2026-03-10 11:45:36] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:43 start_atlas.sh
[2026-03-10 11:45:36] -rw-r--r--. 2 boinc boinc    597939 Mar 10 09:43 input.tar.gz
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc 283452534 Mar 10 11:44 HITS.pool.root.1
[2026-03-10 11:45:36] -rw-------. 1 boinc boinc   1382400 Mar 10 11:45 result.tar.gz
11:45:37 (2998393): run_atlas exited; CPU time 28300.027888
11:45:37 (2998393): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN