Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:13 (3617686): wrapper (7.7.26015): starting
00:01:13 (3617686): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 00:01:13] Arguments: --nthreads 8
[2026-03-10 00:01:13] Threads: 8
[2026-03-10 00:01:13] Checking for CVMFS
[2026-03-10 00:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 00:01:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 00:01:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 00:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 00:01:16] 2.13.3.0 9185 179258 359728 157100 1 264 24426709 32935937 18914 16776704 0 730334190 99.705 569659963 32932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-10 00:01:16] CVMFS is ok
[2026-03-10 00:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 00:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 00:01:16] Further information can be found at the LHC@home message board.
[2026-03-10 00:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 00:01:16] Checking for apptainer binary...
[2026-03-10 00:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 00:01:16] Running /usr/bin/apptainer --version
[2026-03-10 00:01:17] apptainer version 1.4.5-2.el9
[2026-03-10 00:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 00:01:19] c-5-6.aglt2.org
[2026-03-10 00:01:19] apptainer works
[2026-03-10 00:01:19] Set ATHENA_PROC_NUMBER=8
[2026-03-10 00:01:19] Set ATHENA_CORE_NUMBER=8
[2026-03-10 00:01:20] Starting ATLAS job with PandaID=7041362602
[2026-03-10 00:01:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 13:20:46]  *** The last 200 lines of the pilot log: ***
[2026-03-11 13:20:46] 2026-03-11 12:27:20,052 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 13:20:46] 2026-03-11 12:27:20,052 | INFO     | log transfer has been attempted: DONE
[2026-03-11 13:20:46] 2026-03-11 12:27:20,052 | INFO     | job 7041362602 has finished - writing final server update
[2026-03-11 13:20:46] 2026-03-11 12:27:20,053 | INFO     | total number of processed events: 400 (read)
[2026-03-11 13:20:46] 2026-03-11 12:27:20,111 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7041362602/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 13:20:46] 2026-03-11 12:27:20,167 | INFO     | extracted standard info from prmon json
[2026-03-11 13:20:46] 2026-03-11 12:27:20,167 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 13:20:46] 2026-03-11 12:27:20,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 13:20:46] 2026-03-11 12:27:20,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 13:20:46] 2026-03-11 12:27:20,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 13:20:46] 2026-03-11 12:27:20,398 | INFO     | fitting pss+swap vs Time
[2026-03-11 13:20:46] 2026-03-11 12:27:20,401 | INFO     | sum of square deviations: 2160463332536.3423
[2026-03-11 13:20:46] 2026-03-11 12:27:21,272 | INFO     | sum of deviations: 3531305637960.426
[2026-03-11 13:20:46] 2026-03-11 12:27:21,272 | INFO     | mean x: 1773173765.7136126
[2026-03-11 13:20:46] 2026-03-11 12:27:21,272 | INFO     | mean y: 2463775.1104712044
[2026-03-11 13:20:46] 2026-03-11 12:27:21,272 | INFO     | intersect: -2895811989.0039697
[2026-03-11 13:20:46] 2026-03-11 12:27:21,279 | INFO     | chi2: 15.364975391926583
[2026-03-11 13:20:46] 2026-03-11 12:27:21,284 | INFO     | sum of square deviations: 2143540662769.7197
[2026-03-11 13:20:46] 2026-03-11 12:27:21,598 | INFO     | PID=3633273 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-11 13:20:46] 2026-03-11 12:27:21,598 | INFO     | .. there are 43 such processes running
[2026-03-11 13:20:46] 2026-03-11 12:27:21,630 | INFO     | sum of deviations: 4136400321471.9717
[2026-03-11 13:20:46] 2026-03-11 12:27:21,630 | INFO     | mean x: 1773173613.2188976
[2026-03-11 13:20:46] 2026-03-11 12:27:21,631 | INFO     | mean y: 2469227.9784776904
[2026-03-11 13:20:46] 2026-03-11 12:27:21,631 | INFO     | intersect: -3419232086.643244
[2026-03-11 13:20:46] 2026-03-11 12:27:21,634 | INFO     | chi2: 11.800996863329717
[2026-03-11 13:20:46] 2026-03-11 12:27:21,634 | INFO     | current chi2=11.800996863329717 (change=23.195471764110557 %)
[2026-03-11 13:20:46] 2026-03-11 12:27:21,634 | INFO     | right removable region: 1904
[2026-03-11 13:20:46] 2026-03-11 12:27:21,637 | INFO     | sum of square deviations: 2143538316343.7202
[2026-03-11 13:20:46] 2026-03-11 12:27:21,798 | INFO     | monitor loop #5851: job 0:7041362602 is in state 'finished'
[2026-03-11 13:20:46] 2026-03-11 12:27:21,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 13:20:46] 2026-03-11 12:27:22,193 | INFO     | sum of deviations: 2907673881936.538
[2026-03-11 13:20:46] 2026-03-11 12:27:22,193 | INFO     | mean x: 1773173918.2188976
[2026-03-11 13:20:46] 2026-03-11 12:27:22,195 | INFO     | mean y: 2469393.701312336
[2026-03-11 13:20:46] 2026-03-11 12:27:22,195 | INFO     | intersect: -2402811375.4013095
[2026-03-11 13:20:46] 2026-03-11 12:27:22,198 | INFO     | chi2: 11.474846341478454
[2026-03-11 13:20:46] 2026-03-11 12:27:22,198 | INFO     | current chi2=11.474846341478454 (change=25.31815997891002 %)
[2026-03-11 13:20:46] 2026-03-11 12:27:22,211 | INFO     | sum of square deviations: 2126702139490.3828
[2026-03-11 13:20:46] 2026-03-11 12:27:22,604 | INFO     | time since job start (116622s) is within the limit (349056.0s)
[2026-03-11 13:20:46] 2026-03-11 12:27:22,710 | INFO     | sum of deviations: 2405256015664.553
[2026-03-11 13:20:46] 2026-03-11 12:27:22,710 | INFO     | mean x: 1773174070.723158
[2026-03-11 13:20:46] 2026-03-11 12:27:22,710 | INFO     | mean y: 2473944.5010526315
[2026-03-11 13:20:46] 2026-03-11 12:27:22,711 | INFO     | intersect: -2002949156.9443042
[2026-03-11 13:20:46] 2026-03-11 12:27:22,721 | INFO     | chi2: 9.02246931477826
[2026-03-11 13:20:46] 2026-03-11 12:27:22,722 | INFO     | current chi2=9.02246931477826 (change=21.371763540183693 %)
[2026-03-11 13:20:46] 2026-03-11 12:27:22,722 | INFO     | left removable region: 20
[2026-03-11 13:20:46] 2026-03-11 12:27:22,725 | INFO     | sum of square deviations: 2073421424143.9934
[2026-03-11 13:20:46] 2026-03-11 12:27:23,049 | INFO     | sum of deviations: 2194910819676.4365
[2026-03-11 13:20:46] 2026-03-11 12:27:23,049 | INFO     | mean x: 1773174192.7383227
[2026-03-11 13:20:46] 2026-03-11 12:27:23,049 | INFO     | mean y: 2486861.3720806795
[2026-03-11 13:20:46] 2026-03-11 12:27:23,050 | INFO     | intersect: -1874584136.1069584
[2026-03-11 13:20:46] 2026-03-11 12:27:23,053 | INFO     | chi2: 2.218667386215515
[2026-03-11 13:20:46] 2026-03-11 12:27:23,053 | INFO     | current memory leak: 1.06 B/s (using 1884 data points, chi2=2.22)
[2026-03-11 13:20:46] 2026-03-11 12:27:23,055 | INFO     | could have reported an average CPU frequency of 2600 MHz (68 samples)
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | ..............................
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . Timing measurements:
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . get job = 1 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . initial setup = 52 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . payload setup = 58 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . stage-in = 1 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . payload execution = 116521 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . stage-out = 12 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,056 | INFO     | . log creation = 4 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,057 | INFO     | ..............................
[2026-03-11 13:20:46] 2026-03-11 12:27:23,345 | INFO     | 
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | job summary report
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | --------------------------------------------------
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | PanDA job id: 7041362602
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | task id: 48955010
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | errors: (none)
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | pilot state: finished 
[2026-03-11 13:20:46] 2026-03-11 12:27:23,347 | INFO     | transexitcode: 0
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | exeerrorcode: 0
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | exeerrordiag: 
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | exitcode: 0
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | exitmsg: OK
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | cpuconsumptiontime: 46315 s
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | nevents: 400
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | neventsw: 0
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | pid: 3657139
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | pgrp: 3657139
[2026-03-11 13:20:46] 2026-03-11 12:27:23,348 | INFO     | corecount: 8
[2026-03-11 13:20:46] 2026-03-11 12:27:23,349 | INFO     | event service: False
[2026-03-11 13:20:46] 2026-03-11 12:27:23,349 | INFO     | sizes: {0: 2279089, 1: 2279690, 2: 2279774, 3: 2279830, 5: 2239857, 6: 2280475, 17: 2280475, 116584: 2356245, 116598: 2365243, 116602: 2365299, 116605: 2365493}
[2026-03-11 13:20:46] 2026-03-11 12:27:23,349 | INFO     | --------------------------------------------------
[2026-03-11 13:20:46] 2026-03-11 12:27:23,349 | INFO     | 
[2026-03-11 13:20:46] 2026-03-11 12:27:23,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 13:20:46] 2026-03-11 12:27:24,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 13:20:46] 2026-03-11 12:27:24,083 | INFO     | job 7041362602 has completed (purged errors)
[2026-03-11 13:20:46] 2026-03-11 12:27:24,083 | INFO     | overall cleanup function is called
[2026-03-11 13:20:46] 2026-03-11 12:27:25,138 | INFO     | --- collectZombieJob: --- 10, [3657139]
[2026-03-11 13:20:46] 2026-03-11 12:27:25,139 | INFO     | zombie collector waiting for pid 3657139
[2026-03-11 13:20:46] 2026-03-11 12:27:25,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 13:20:46] 2026-03-11 12:27:25,139 | INFO     | collected zombie processes
[2026-03-11 13:20:46] 2026-03-11 12:27:25,139 | INFO     | will attempt to kill all subprocesses of pid=3657139
[2026-03-11 13:20:46] 2026-03-11 12:27:31,175 | INFO     | process IDs to be killed: [3657139] (in reverse order)
[2026-03-11 13:20:46] 2026-03-11 12:27:33,176 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 13:20:46] 2026-03-11 12:27:33,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 13:20:46] 2026-03-11 12:27:33,227 | INFO     | did not find any defunct processes belonging to 3657139
[2026-03-11 13:20:46] 2026-03-11 12:27:33,333 | INFO     | did not find any defunct processes belonging to 3657139
[2026-03-11 13:20:46] 2026-03-11 12:27:33,333 | INFO     | ready for new job
[2026-03-11 13:20:46] 2026-03-11 12:27:33,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 13:20:46] 2026-03-11 12:27:33,364 | INFO     | **************************************
[2026-03-11 13:20:46] 2026-03-11 12:27:33,364 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 13:20:46] 2026-03-11 12:27:33,364 | INFO     | **************************************
[2026-03-11 13:20:46] 2026-03-11 12:27:33,365 | INFO     | 
[2026-03-11 13:20:46] 2026-03-11 12:27:33,397 | INFO     | architecture information:
[2026-03-11 13:20:46] 2026-03-11 12:27:33,411 | INFO     | executing command: cat /etc/os-release
[2026-03-11 13:20:46] 2026-03-11 12:27:33,624 | INFO     | cat /etc/os-release:
[2026-03-11 13:20:46] NAME="CentOS Linux"
[2026-03-11 13:20:46] VERSION="7 (Core)"
[2026-03-11 13:20:46] ID="centos"
[2026-03-11 13:20:46] ID_LIKE="rhel fedora"
[2026-03-11 13:20:46] VERSION_ID="7"
[2026-03-11 13:20:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 13:20:46] ANSI_COLOR="0;31"
[2026-03-11 13:20:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 13:20:46] HOME_URL="https://www.centos.org/"
[2026-03-11 13:20:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 13:20:46] 
[2026-03-11 13:20:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 13:20:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 13:20:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 13:20:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 13:20:46] 
[2026-03-11 13:20:46] 2026-03-11 12:27:33,624 | INFO     | **************************************
[2026-03-11 13:20:46] 2026-03-11 12:27:34,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-11 13:20:46] 2026-03-11 12:27:34,308 | INFO     | sufficient remaining disk space (73570189312 B)
[2026-03-11 13:20:46] 2026-03-11 12:27:34,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 13:20:46] 2026-03-11 12:27:34,308 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 13:20:46] 2026-03-11 12:27:34,308 | INFO     | update_server=False
[2026-03-11 13:20:46] 2026-03-11 12:27:34,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 13:20:46] 2026-03-11 12:27:34,379 | INFO     | all data control threads have been joined
[2026-03-11 13:20:46] 2026-03-11 12:27:34,701 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 13:20:46] 2026-03-11 12:27:34,702 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 13:20:46] 2026-03-11 12:27:34,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 13:20:46] 2026-03-11 12:27:34,702 | INFO     | will abort loop
[2026-03-11 13:20:46] 2026-03-11 12:27:34,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 13:20:46] 2026-03-11 12:27:34,910 | INFO     | all payload control threads have been joined
[2026-03-11 13:20:46] 2026-03-11 12:27:35,316 | INFO     | [job] retrieve thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,361 | INFO     | [data] copytool_in thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 13:20:46] 2026-03-11 12:27:35,399 | INFO     | [data] control thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,528 | INFO     | [job] validate thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,709 | INFO     | [job] job monitor thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,882 | INFO     | all job control threads have been joined
[2026-03-11 13:20:46] 2026-03-11 12:27:35,916 | INFO     | [payload] control thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,963 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,998 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:35,975 | INFO     | [payload] failed_post thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:36,210 | INFO     | [payload] validate_post thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:36,466 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:36,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 13:20:46] 2026-03-11 12:27:36,739 | INFO     | [data] copytool_out thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:36,898 | INFO     | [job] control thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:37,699 | INFO     | [job] queue monitor thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:39,394 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 13:20:46] 2026-03-11 12:27:58,968 | INFO     | PID=3633273 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 13:20:46] 2026-03-11 12:27:58,968 | INFO     | .. there are 43 such processes running
[2026-03-11 13:20:46] 2026-03-11 12:27:58,968 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 13:20:46] 2026-03-11 12:27:58,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 13:20:46] 2026-03-11 12:27:58,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 13:20:46] 2026-03-11 12:28:28,596 | INFO     | [monitor] cgroup control has ended
[2026-03-11 13:20:46] 2026-03-11 12:28:29,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670652499776)>', '<ExcThread(monitor, started 139670306412288)>']
[2026-03-11 13:20:46] 2026-03-11 12:28:30,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 13:20:46] 2026-03-11 12:28:30,228 | INFO     | [monitor] control thread has ended
[2026-03-11 13:20:46] 2026-03-11 12:28:34,550 | INFO     | all workflow threads have been joined
[2026-03-11 13:20:46] 2026-03-11 12:28:34,551 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 13:20:46] 2026-03-11 12:28:34,551 | INFO     | traces error code: 0
[2026-03-11 13:20:46] 2026-03-11 12:28:34,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 13:20:46] 2026-03-11 12:28:34,833 [wrapper] ==== pilot stdout END ====
[2026-03-11 13:20:46] 2026-03-11 12:28:34,927 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 13:20:46] 2026-03-11 12:28:35,036 [wrapper] pilotpid: 3633273
[2026-03-11 13:20:46] 2026-03-11 12:28:35,084 [wrapper] Pilot exit status: 0
[2026-03-11 13:20:46] 2026-03-11 12:28:35,343 [wrapper] pandaids: 7041362602
[2026-03-11 13:20:46] 2026-03-11 12:28:37,714 [wrapper] cleanup supervisor_pilot 2460038 3633274
[2026-03-11 13:20:46] 2026-03-11 12:28:37,749 [wrapper] Test setup, not cleaning
[2026-03-11 13:20:46] 2026-03-11 12:28:37,788 [wrapper] apfmon messages muted
[2026-03-11 13:20:46] 2026-03-11 12:28:37,841 [wrapper] ==== wrapper stdout END ====
[2026-03-11 13:20:46] 2026-03-11 12:28:37,940 [wrapper] ==== wrapper stderr END ====
[2026-03-11 13:20:46]  *** Error codes and diagnostics ***
[2026-03-11 13:20:46]     "exeErrorCode": 0,
[2026-03-11 13:20:46]     "exeErrorDiag": "",
[2026-03-11 13:20:46]     "pilotErrorCode": 0,
[2026-03-11 13:20:46]     "pilotErrorDiag": "",
[2026-03-11 13:20:46]  *** Listing of results directory ***
[2026-03-11 13:20:46] total 643568
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas    584627 Mar  9 15:33 pilot3.tar.gz
[2026-03-11 13:20:46] -rwx------. 1 boincer umatlas     36322 Mar  9 15:33 runpilot2-wrapper.sh
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas      5111 Mar  9 15:34 queuedata.json
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas       100 Mar 10 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 13:20:46] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 00:01 run_atlas
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas       105 Mar 10 00:01 job.xml
[2026-03-11 13:20:46] -rw-r--r--. 2 boincer umatlas 445725641 Mar 10 00:01 EVNT.46701403._001413.pool.root.1
[2026-03-11 13:20:46] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 00:01 start_atlas.sh
[2026-03-11 13:20:46] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 00:01 shared
[2026-03-11 13:20:46] -rw-r--r--. 2 boincer umatlas    597964 Mar 10 00:01 input.tar.gz
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas         0 Mar 10 00:01 boinc_lockfile
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas      2563 Mar 10 00:01 pandaJob.out
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas        57 Mar 10 00:01 setup.sh.local
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas   1006495 Mar 10 00:02 agis_schedconf.cvmfs.json
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas       432 Mar 10 00:03 workernode_map.json
[2026-03-11 13:20:46] drwx------. 5 boincer umatlas      4096 Mar 10 00:03 pilot3
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas 180140311 Mar 11 08:21 HITS.48955010._020757.pool.root.1
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas       532 Mar 11 08:21 boinc_task_state.xml
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas      1075 Mar 11 08:26 memory_monitor_summary.json
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas   1511578 Mar 11 08:27 agis_ddmendpoints.agis.ALL.json
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas   1663546 Mar 11 08:27 log.48955010._020757.job.log.tgz.1
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas      6425 Mar 11 08:27 heartbeat.json
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas        95 Mar 11 08:27 pilot_heartbeat.json
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas      5006 Mar 11 08:28 pilotlog.txt
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas  12936841 Mar 11 08:28 log.48955010._020757.job.log.1
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas       357 Mar 11 08:28 output.list
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas       620 Mar 11 08:28 runtime_log
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas  14622720 Mar 11 08:28 result.tar.gz
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas       662 Mar 11 08:28 trYKDmPXvJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkddLDmD5TE6m.diag
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas      9328 Mar 11 08:28 runtime_log.err
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas      6659 Mar 11 13:20 init_data.xml
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 13:20 boinc_mmap_file
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas        28 Mar 11 13:20 wrapper_checkpoint.txt
[2026-03-11 13:20:46] -rw-r--r--. 1 boincer umatlas     21413 Mar 11 13:20 stderr.txt
[2026-03-11 13:20:46] HITS file was successfully produced:
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas 180140311 Mar 11 08:21 shared/HITS.pool.root.1
[2026-03-11 13:20:46]  *** Contents of shared directory: ***
[2026-03-11 13:20:46] total 626088
[2026-03-11 13:20:46] -rw-r--r--. 2 boincer umatlas 445725641 Mar 10 00:01 ATLAS.root_0
[2026-03-11 13:20:46] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 00:01 start_atlas.sh
[2026-03-11 13:20:46] -rw-r--r--. 2 boincer umatlas    597964 Mar 10 00:01 input.tar.gz
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas 180140311 Mar 11 08:21 HITS.pool.root.1
[2026-03-11 13:20:46] -rw-------. 1 boincer umatlas  14622720 Mar 11 08:28 result.tar.gz
13:20:48 (3617686): run_atlas exited; CPU time 52385.962368
13:20:48 (3617686): called boinc_finish(0)

</stderr_txt>
]]>

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