Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:42:01 (3490848): wrapper (7.7.26015): starting
09:42:01 (3490848): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 09:42:01] Arguments: --nthreads 4
[2026-03-10 09:42:01] Threads: 4
[2026-03-10 09:42:01] Checking for CVMFS
[2026-03-10 09:42:01] No cvmfs_config command found, will try listing directly
[2026-03-10 09:42:01] CVMFS is ok
[2026-03-10 09:42:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 09:42:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 09:42:01] Further information can be found at the LHC@home message board.
[2026-03-10 09:42:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 09:42:01] Checking for apptainer binary...
[2026-03-10 09:42:01] which: no apptainer in ((null))
[2026-03-10 09:42:01] apptainer is not installed, using version from CVMFS
[2026-03-10 09:42:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 09:42:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-10 09:42:02] apptainer works
[2026-03-10 09:42:02] Set ATHENA_PROC_NUMBER=4
[2026-03-10 09:42:02] Set ATHENA_CORE_NUMBER=4
[2026-03-10 09:42:02] Starting ATLAS job with PandaID=7040885197
[2026-03-10 09:42:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 11:00:27]  *** The last 200 lines of the pilot log: ***
[2026-03-10 11:00:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 11:00:27]  replicas=None
[2026-03-10 11:00:27]  scope=mc23_13p6TeV
[2026-03-10 11:00:27]  status=None
[2026-03-10 11:00:27]  status_code=0
[2026-03-10 11:00:27]  storage_token=
[2026-03-10 11:00:27]  surl=/var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/log.48955006._034801.job.log.tgz.1
[2026-03-10 11:00:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/f6/log.48955006._034801.job.log.tgz.1
[2026-03-10 11:00:27]  workdir=None
[2026-03-10 11:00:27] ]
[2026-03-10 11:00:27] 2026-03-10 09:59:22,872 | INFO     | transferring file log.48955006._034801.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/log.48955006._034801.job.log.tgz.1 to /var/lib/b
[2026-03-10 11:00:27] 2026-03-10 09:59:22,872 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/log.48955006._034801.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/8/lo
[2026-03-10 11:00:27] 2026-03-10 09:59:22,889 | INFO     | adding to output.list: log.48955006._034801.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/f6/log.48955006._034801.job.log.tg
[2026-03-10 11:00:27] 2026-03-10 09:59:22,889 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 11:00:27] 2026-03-10 09:59:22,889 | INFO     | summary of transferred files:
[2026-03-10 11:00:27] 2026-03-10 09:59:22,889 | INFO     |  -- lfn=log.48955006._034801.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 11:00:27] 2026-03-10 09:59:22,889 | INFO     | stage-out finished correctly
[2026-03-10 11:00:27] 2026-03-10 09:59:23,899 | INFO     | time since job start (4629s) is within the limit (349056.0s)
[2026-03-10 11:00:27] 2026-03-10 09:59:25,320 | WARNING  | process 3516664 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 11:00:27] 2026-03-10 09:59:25,320 | INFO     | using path: /var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 11:00:27] 2026-03-10 09:59:25,320 | INFO     | using path: /var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 11:00:27] 2026-03-10 09:59:25,321 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-10 11:00:27] 2026-03-10 09:59:25,321 | WARNING  | maxPSS not found in memory monitor output
[2026-03-10 11:00:27] 2026-03-10 09:59:25,497 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 11:00:27] 2026-03-10 09:59:25,807 | INFO     | number of running child processes to parent process 3516664: 1
[2026-03-10 11:00:27] 2026-03-10 09:59:25,807 | INFO     | maximum number of monitored processes: 6
[2026-03-10 11:00:27] 2026-03-10 09:59:25,913 | INFO     | time since job start (4631s) is within the limit (349056.0s)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,342 | INFO     | job 7040885197 has state=finished
[2026-03-10 11:00:27] 2026-03-10 09:59:27,342 | INFO     | preparing for final server update for job 7040885197 in state='finished'
[2026-03-10 11:00:27] 2026-03-10 09:59:27,342 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/jobReport.json
[2026-03-10 11:00:27] 2026-03-10 09:59:27,346 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/8/workernode_map.json
[2026-03-10 11:00:27] 2026-03-10 09:59:27,346 | INFO     | this job has now completed (state=finished)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,346 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,346 | INFO     | log transfer has been attempted: DONE
[2026-03-10 11:00:27] 2026-03-10 09:59:27,346 | INFO     | job 7040885197 has finished - writing final server update
[2026-03-10 11:00:27] 2026-03-10 09:59:27,347 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3621859/.job.ad'
[2026-03-10 11:00:27] 2026-03-10 09:59:27,347 | INFO     | total number of processed events: 400 (read)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,371 | INFO     | using path: /var/lib/boinc/var/slot44/slots/8/PanDA_Pilot-7040885197/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,372 | INFO     | extracted standard info from prmon json
[2026-03-10 11:00:27] 2026-03-10 09:59:27,372 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 11:00:27] 2026-03-10 09:59:27,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 11:00:27] 2026-03-10 09:59:27,372 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 11:00:27] 2026-03-10 09:59:27,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | fitting pss+swap vs Time
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | sum of square deviations: 101843770.0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | sum of deviations: 398192079.0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | mean x: 1773134533.0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | mean y: 2331006.072463768
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | intersect: -6930327967.981266
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | chi2: 0.0003328797594257464
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | current memory leak: 3.91 B/s (using 69 data points, chi2=0.00)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,374 | INFO     | could have reported an average CPU frequency of 3593 MHz (6 samples)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | ..............................
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . Timing measurements:
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . get job = 0 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . initial setup = 5 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . payload setup = 4 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . stage-in = 0 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . payload execution = 4607 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . stage-out = 0 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | . log creation = 0 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,375 | INFO     | ..............................
[2026-03-10 11:00:27] 2026-03-10 09:59:27,433 | INFO     | 
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | job summary report
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | --------------------------------------------------
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | PanDA job id: 7040885197
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | task id: 48955006
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | errors: (none)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | pilot state: finished 
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | transexitcode: 0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | exeerrorcode: 0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | exeerrordiag: 
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | exitcode: 0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | exitmsg: OK
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | cpuconsumptiontime: 17689 s
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | nevents: 400
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | neventsw: 0
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | pid: 3516664
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | pgrp: 3516664
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | corecount: 4
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | event service: False
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | sizes: {0: 2279810, 1: 2280271, 11: 2280271, 4615: 2306502, 4616: 2306501, 4618: 2315577, 4620: 2315761, 4622: 2315955}
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | --------------------------------------------------
[2026-03-10 11:00:27] 2026-03-10 09:59:27,434 | INFO     | 
[2026-03-10 11:00:27] 2026-03-10 09:59:27,435 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/8
[2026-03-10 11:00:27] 2026-03-10 09:59:27,455 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,455 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | job 7040885197 has completed (purged errors)
[2026-03-10 11:00:27] 2026-03-10 09:59:27,456 | INFO     | overall cleanup function is called
[2026-03-10 11:00:27] 2026-03-10 09:59:27,513 | INFO     | PID=3497187 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-10 11:00:27] 2026-03-10 09:59:27,513 | INFO     | .. there are 60 such processes running
[2026-03-10 11:00:27] 2026-03-10 09:59:28,464 | INFO     | --- collectZombieJob: --- 10, [3516664]
[2026-03-10 11:00:27] 2026-03-10 09:59:28,465 | INFO     | zombie collector waiting for pid 3516664
[2026-03-10 11:00:27] 2026-03-10 09:59:28,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 11:00:27] 2026-03-10 09:59:28,465 | INFO     | collected zombie processes
[2026-03-10 11:00:27] 2026-03-10 09:59:28,465 | INFO     | will attempt to kill all subprocesses of pid=3516664
[2026-03-10 11:00:27] 2026-03-10 09:59:28,928 | INFO     | process IDs to be killed: [3516664] (in reverse order)
[2026-03-10 11:00:27] 2026-03-10 09:59:29,247 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 11:00:27] 2026-03-10 09:59:29,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 11:00:27] 2026-03-10 09:59:29,274 | INFO     | did not find any defunct processes belonging to 3516664
[2026-03-10 11:00:27] 2026-03-10 09:59:29,299 | INFO     | did not find any defunct processes belonging to 3516664
[2026-03-10 11:00:27] 2026-03-10 09:59:29,300 | INFO     | ready for new job
[2026-03-10 11:00:27] 2026-03-10 09:59:29,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 11:00:27] 2026-03-10 09:59:29,301 | INFO     | **************************************
[2026-03-10 11:00:27] 2026-03-10 09:59:29,301 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 11:00:27] 2026-03-10 09:59:29,301 | INFO     | **************************************
[2026-03-10 11:00:27] 2026-03-10 09:59:29,301 | INFO     | 
[2026-03-10 11:00:27] 2026-03-10 09:59:29,307 | INFO     | architecture information:
[2026-03-10 11:00:27] 2026-03-10 09:59:29,308 | INFO     | executing command: cat /etc/os-release
[2026-03-10 11:00:27] 2026-03-10 09:59:29,324 | INFO     | cat /etc/os-release:
[2026-03-10 11:00:27] NAME="CentOS Linux"
[2026-03-10 11:00:27] VERSION="7 (Core)"
[2026-03-10 11:00:27] ID="centos"
[2026-03-10 11:00:27] ID_LIKE="rhel fedora"
[2026-03-10 11:00:27] VERSION_ID="7"
[2026-03-10 11:00:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 11:00:27] ANSI_COLOR="0;31"
[2026-03-10 11:00:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 11:00:27] HOME_URL="https://www.centos.org/"
[2026-03-10 11:00:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 11:00:27] 
[2026-03-10 11:00:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 11:00:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 11:00:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 11:00:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 11:00:27] 
[2026-03-10 11:00:27] 2026-03-10 09:59:29,324 | INFO     | **************************************
[2026-03-10 11:00:27] 2026-03-10 09:59:29,827 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/8
[2026-03-10 11:00:27] 2026-03-10 09:59:29,844 | INFO     | sufficient remaining disk space (20356005888 B)
[2026-03-10 11:00:27] 2026-03-10 09:59:29,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 11:00:27] 2026-03-10 09:59:29,845 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 11:00:27] 2026-03-10 09:59:29,845 | INFO     | update_server=False
[2026-03-10 11:00:27] 2026-03-10 09:59:29,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 11:00:27] 2026-03-10 09:59:29,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:00:27] 2026-03-10 09:59:29,845 | INFO     | aborting loop
[2026-03-10 11:00:27] 2026-03-10 09:59:30,407 | INFO     | all data control threads have been joined
[2026-03-10 11:00:27] 2026-03-10 09:59:30,850 | INFO     | [job] retrieve thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:30,851 | INFO     | [job] job monitor thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:30,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 11:00:27] 2026-03-10 09:59:31,317 | INFO     | all payload control threads have been joined
[2026-03-10 11:00:27] 2026-03-10 09:59:31,342 | INFO     | [payload] failed_post thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:31,383 | INFO     | all job control threads have been joined
[2026-03-10 11:00:27] 2026-03-10 09:59:31,413 | INFO     | [data] control thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:31,444 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:31,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 11:00:27] 2026-03-10 09:59:31,570 | INFO     | [job] validate thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:31,602 | INFO     | [data] copytool_in thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:31,616 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:31,771 | INFO     | [payload] validate_post thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:32,322 | INFO     | [payload] control thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:32,340 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:32,389 | INFO     | [job] control thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:32,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 11:00:27] 2026-03-10 09:59:32,956 | INFO     | [data] copytool_out thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:33,444 | INFO     | [job] queue monitor thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:35,568 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 11:00:27] 2026-03-10 09:59:40,249 | INFO     | job.realtimelogging is not enabled
[2026-03-10 11:00:27] 2026-03-10 09:59:41,254 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 11:00:27] 2026-03-10 10:00:00,117 | INFO     | PID=3497187 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 11:00:27] 2026-03-10 10:00:00,117 | INFO     | .. there are 60 such processes running
[2026-03-10 11:00:27] 2026-03-10 10:00:00,118 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 11:00:27] 2026-03-10 10:00:00,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 11:00:27] 2026-03-10 10:00:00,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 11:00:27] 2026-03-10 10:00:21,824 | INFO     | [monitor] cgroup control has ended
[2026-03-10 11:00:27] 2026-03-10 10:00:22,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22928704087872)>', '<ExcThread(monitor, started 22928466130688)>']
[2026-03-10 11:00:27] 2026-03-10 10:00:23,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 11:00:27] 2026-03-10 10:00:23,234 | INFO     | [monitor] control thread has ended
[2026-03-10 11:00:27] 2026-03-10 10:00:27,433 | INFO     | all workflow threads have been joined
[2026-03-10 11:00:27] 2026-03-10 10:00:27,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 11:00:27] 2026-03-10 10:00:27,436 | INFO     | traces error code: 0
[2026-03-10 11:00:27] 2026-03-10 10:00:27,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 11:00:27] 2026-03-10 10:00:27,622 [wrapper] ==== pilot stdout END ====
[2026-03-10 11:00:27] 2026-03-10 10:00:27,625 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 11:00:27] 2026-03-10 10:00:27,627 [wrapper] pilotpid: 3497187
[2026-03-10 11:00:27] 2026-03-10 10:00:27,632 [wrapper] Pilot exit status: 0
[2026-03-10 11:00:27] 2026-03-10 10:00:27,638 [wrapper] pandaids: 7040885197
[2026-03-10 11:00:27] 2026-03-10 10:00:27,752 [wrapper] cleanup supervisor_pilot  126833 3497189
[2026-03-10 11:00:27] 2026-03-10 10:00:27,755 [wrapper] Test setup, not cleaning
[2026-03-10 11:00:27] 2026-03-10 10:00:27,758 [wrapper] apfmon messages muted
[2026-03-10 11:00:27] 2026-03-10 10:00:27,760 [wrapper] ==== wrapper stdout END ====
[2026-03-10 11:00:27] 2026-03-10 10:00:27,764 [wrapper] ==== wrapper stderr END ====
[2026-03-10 11:00:27]  *** Error codes and diagnostics ***
[2026-03-10 11:00:27]     "exeErrorCode": 0,
[2026-03-10 11:00:27]     "exeErrorDiag": "",
[2026-03-10 11:00:27]     "pilotErrorCode": 0,
[2026-03-10 11:00:27]     "pilotErrorDiag": "",
[2026-03-10 11:00:27]  *** Listing of results directory ***
[2026-03-10 11:00:27] total 611204
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc      5111 Mar  9 16:41 queuedata.json
[2026-03-10 11:00:27] -rwx------. 1 boinc boinc     36322 Mar  9 16:41 runpilot2-wrapper.sh
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc       100 Mar 10 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 11:00:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 09:42 run_atlas
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc       105 Mar 10 09:42 job.xml
[2026-03-10 11:00:27] -rw-r--r--. 2 boinc boinc 440528483 Mar 10 09:42 EVNT.46701403._000696.pool.root.1
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc      6705 Mar 10 09:42 init_data.xml
[2026-03-10 11:00:27] drwxrwx--x. 2 boinc boinc      4096 Mar 10 09:42 shared
[2026-03-10 11:00:27] -rw-r--r--. 2 boinc boinc    597956 Mar 10 09:42 input.tar.gz
[2026-03-10 11:00:27] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:42 start_atlas.sh
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc         0 Mar 10 09:42 boinc_lockfile
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc      2565 Mar 10 09:42 pandaJob.out
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc   1005073 Mar 10 09:42 agis_schedconf.cvmfs.json
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc   1511578 Mar 10 09:42 agis_ddmendpoints.agis.ALL.json
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc       444 Mar 10 09:42 workernode_map.json
[2026-03-10 11:00:27] drwx------. 5 boinc boinc      4096 Mar 10 09:42 pilot3
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc       530 Mar 10 10:58 boinc_task_state.xml
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc 179458192 Mar 10 10:58 HITS.48955006._034801.pool.root.1
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc      1030 Mar 10 10:59 memory_monitor_summary.json
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc    289376 Mar 10 10:59 log.48955006._034801.job.log.tgz.1
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc      6354 Mar 10 10:59 heartbeat.json
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc        95 Mar 10 11:00 pilot_heartbeat.json
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc        27 Mar 10 11:00 wrapper_checkpoint.txt
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc      8192 Mar 10 11:00 boinc_mmap_file
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc      4901 Mar 10 11:00 pilotlog.txt
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc    681005 Mar 10 11:00 log.48955006._034801.job.log.1
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc       357 Mar 10 11:00 output.list
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc       620 Mar 10 11:00 runtime_log
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc    993280 Mar 10 11:00 result.tar.gz
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc       660 Mar 10 11:00 xY2KDmWurJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdscLDmYPeN2m.diag
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc      9204 Mar 10 11:00 runtime_log.err
[2026-03-10 11:00:27] -rw-r--r--. 1 boinc boinc     21918 Mar 10 11:00 stderr.txt
[2026-03-10 11:00:27] HITS file was successfully produced:
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc 179458192 Mar 10 10:58 shared/HITS.pool.root.1
[2026-03-10 11:00:27]  *** Contents of shared directory: ***
[2026-03-10 11:00:27] total 607040
[2026-03-10 11:00:27] -rw-r--r--. 2 boinc boinc 440528483 Mar 10 09:42 ATLAS.root_0
[2026-03-10 11:00:27] -rw-r--r--. 2 boinc boinc    597956 Mar 10 09:42 input.tar.gz
[2026-03-10 11:00:27] -rw-r--r--. 2 boinc boinc     15845 Mar 10 09:42 start_atlas.sh
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc 179458192 Mar 10 10:58 HITS.pool.root.1
[2026-03-10 11:00:27] -rw-------. 1 boinc boinc    993280 Mar 10 11:00 result.tar.gz
11:00:29 (3490848): run_atlas exited; CPU time 17868.386514
11:00:29 (3490848): called boinc_finish(0)

</stderr_txt>
]]>

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