Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:10:18 (1166784): wrapper (7.7.26015): starting
07:10:18 (1166784): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 07:10:18] Arguments: --nthreads 4
[2026-03-10 07:10:18] Threads: 4
[2026-03-10 07:10:18] Checking for CVMFS
[2026-03-10 07:10:18] No cvmfs_config command found, will try listing directly
[2026-03-10 07:10:18] CVMFS is ok
[2026-03-10 07:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 07:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 07:10:18] Further information can be found at the LHC@home message board.
[2026-03-10 07:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 07:10:18] Checking for apptainer binary...
[2026-03-10 07:10:18] which: no apptainer in ((null))
[2026-03-10 07:10:18] apptainer is not installed, using version from CVMFS
[2026-03-10 07:10:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 07:10:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-10 07:10:19] apptainer works
[2026-03-10 07:10:19] Set ATHENA_PROC_NUMBER=4
[2026-03-10 07:10:19] Set ATHENA_CORE_NUMBER=4
[2026-03-10 07:10:19] Starting ATLAS job with PandaID=7040898275
[2026-03-10 07:10:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:32:56]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:32:56]  guid=435e6e25-044d-4abd-a0da-a7016328100b
[2026-03-10 08:32:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 08:32:56]  is_altstaged=None
[2026-03-10 08:32:56]  is_tar=False
[2026-03-10 08:32:56]  lfn=log.48955010._018943.job.log.tgz.1
[2026-03-10 08:32:56]  mtime=0
[2026-03-10 08:32:56]  protocol_id=None
[2026-03-10 08:32:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 08:32:56]  replicas=None
[2026-03-10 08:32:56]  scope=mc23_13p6TeV
[2026-03-10 08:32:56]  status=None
[2026-03-10 08:32:56]  status_code=0
[2026-03-10 08:32:56]  storage_token=
[2026-03-10 08:32:56]  surl=/var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7040898275/log.48955010._018943.job.log.tgz.1
[2026-03-10 08:32:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/2f/log.48955010._018943.job.log.tgz.1
[2026-03-10 08:32:56]  workdir=None
[2026-03-10 08:32:56] ]
[2026-03-10 08:32:56] 2026-03-10 07:32:01,814 | INFO     | transferring file log.48955010._018943.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7040898275/log.48955010._018943.job.log.tgz.1 to /var/lib/b
[2026-03-10 08:32:56] 2026-03-10 07:32:01,814 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7040898275/log.48955010._018943.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/7/lo
[2026-03-10 08:32:56] 2026-03-10 07:32:01,828 | INFO     | adding to output.list: log.48955010._018943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/2f/log.48955010._018943.job.log.tg
[2026-03-10 08:32:56] 2026-03-10 07:32:01,829 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 08:32:56] 2026-03-10 07:32:01,829 | INFO     | summary of transferred files:
[2026-03-10 08:32:56] 2026-03-10 07:32:01,829 | INFO     |  -- lfn=log.48955010._018943.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 08:32:56] 2026-03-10 07:32:01,829 | INFO     | stage-out finished correctly
[2026-03-10 08:32:56] 2026-03-10 07:32:01,880 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 08:32:56] 2026-03-10 07:32:03,503 | INFO     | time since job start (4882s) is within the limit (349056.0s)
[2026-03-10 08:32:56] 2026-03-10 07:32:03,963 | INFO     | monitor loop #351: job 0:7040898275 is in state 'finished'
[2026-03-10 08:32:56] 2026-03-10 07:32:03,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 08:32:56] 2026-03-10 07:32:03,969 | INFO     | job 7040898275 has state=finished
[2026-03-10 08:32:56] 2026-03-10 07:32:03,969 | INFO     | preparing for final server update for job 7040898275 in state='finished'
[2026-03-10 08:32:56] 2026-03-10 07:32:04,614 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,615 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7040898275/jobReport.json
[2026-03-10 08:32:56] 2026-03-10 07:32:04,616 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/7/workernode_map.json
[2026-03-10 08:32:56] 2026-03-10 07:32:04,616 | INFO     | this job has now completed (state=finished)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,616 | INFO     | log transfer has been attempted: DONE
[2026-03-10 08:32:56] 2026-03-10 07:32:04,617 | INFO     | job 7040898275 has finished - writing final server update
[2026-03-10 08:32:56] 2026-03-10 07:32:04,617 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3147942/.job.ad'
[2026-03-10 08:32:56] 2026-03-10 07:32:04,617 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,635 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7040898275/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,635 | INFO     | extracted standard info from prmon json
[2026-03-10 08:32:56] 2026-03-10 07:32:04,635 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:32:56] 2026-03-10 07:32:04,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:32:56] 2026-03-10 07:32:04,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:32:56] 2026-03-10 07:32:04,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:32:56] 2026-03-10 07:32:04,636 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:32:56] 2026-03-10 07:32:04,636 | INFO     | sum of square deviations: 120605052.0
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | sum of deviations: 786824970.0000001
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | mean x: 1773125563.0
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | mean y: 2313424.9589041094
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | intersect: -11565522621.525354
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | chi2: 0.00016297096733871108
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | current memory leak: 6.52 B/s (using 73 data points, chi2=0.00)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | could have reported an average CPU frequency of 3570 MHz (6 samples)
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | ..............................
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . Timing measurements:
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . get job = 0 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . initial setup = 8 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . payload setup = 4 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . stage-in = 0 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . payload execution = 4859 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . stage-out = 0 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | . log creation = 0 s
[2026-03-10 08:32:56] 2026-03-10 07:32:04,637 | INFO     | ..............................
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | 
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | job summary report
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | --------------------------------------------------
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | PanDA job id: 7040898275
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | task id: 48955010
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | errors: (none)
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | pilot state: finished 
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | transexitcode: 0
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | exeerrorcode: 0
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | exeerrordiag: 
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | exitcode: 0
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | exitmsg: OK
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | cpuconsumptiontime: 18507 s
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | nevents: 400
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | neventsw: 0
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | pid: 1186081
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | pgrp: 1186081
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | corecount: 4
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | event service: False
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | sizes: {0: 2280190, 11: 2280190, 4867: 2306559, 4869: 2315635, 4871: 2315773}
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | --------------------------------------------------
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | 
[2026-03-10 08:32:56] 2026-03-10 07:32:05,080 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/7
[2026-03-10 08:32:56] 2026-03-10 07:32:05,099 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | job 7040898275 has completed (purged errors)
[2026-03-10 08:32:56] 2026-03-10 07:32:05,100 | INFO     | overall cleanup function is called
[2026-03-10 08:32:56] 2026-03-10 07:32:06,107 | INFO     | --- collectZombieJob: --- 10, [1186081]
[2026-03-10 08:32:56] 2026-03-10 07:32:06,108 | INFO     | zombie collector waiting for pid 1186081
[2026-03-10 08:32:56] 2026-03-10 07:32:06,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:32:56] 2026-03-10 07:32:06,108 | INFO     | collected zombie processes
[2026-03-10 08:32:56] 2026-03-10 07:32:06,108 | INFO     | will attempt to kill all subprocesses of pid=1186081
[2026-03-10 08:32:56] 2026-03-10 07:32:06,537 | INFO     | process IDs to be killed: [1186081] (in reverse order)
[2026-03-10 08:32:56] 2026-03-10 07:32:06,759 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:32:56] 2026-03-10 07:32:06,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:32:56] 2026-03-10 07:32:06,786 | INFO     | did not find any defunct processes belonging to 1186081
[2026-03-10 08:32:56] 2026-03-10 07:32:06,812 | INFO     | did not find any defunct processes belonging to 1186081
[2026-03-10 08:32:56] 2026-03-10 07:32:06,813 | INFO     | ready for new job
[2026-03-10 08:32:56] 2026-03-10 07:32:06,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:32:56] 2026-03-10 07:32:06,814 | INFO     | **************************************
[2026-03-10 08:32:56] 2026-03-10 07:32:06,814 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:32:56] 2026-03-10 07:32:06,814 | INFO     | **************************************
[2026-03-10 08:32:56] 2026-03-10 07:32:06,814 | INFO     | 
[2026-03-10 08:32:56] 2026-03-10 07:32:06,821 | INFO     | architecture information:
[2026-03-10 08:32:56] 2026-03-10 07:32:06,821 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:32:56] 2026-03-10 07:32:06,835 | INFO     | cat /etc/os-release:
[2026-03-10 08:32:56] NAME="CentOS Linux"
[2026-03-10 08:32:56] VERSION="7 (Core)"
[2026-03-10 08:32:56] ID="centos"
[2026-03-10 08:32:56] ID_LIKE="rhel fedora"
[2026-03-10 08:32:56] VERSION_ID="7"
[2026-03-10 08:32:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:32:56] ANSI_COLOR="0;31"
[2026-03-10 08:32:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:32:56] HOME_URL="https://www.centos.org/"
[2026-03-10 08:32:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:32:56] 
[2026-03-10 08:32:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:32:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:32:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:32:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:32:56] 
[2026-03-10 08:32:56] 2026-03-10 07:32:06,835 | INFO     | **************************************
[2026-03-10 08:32:56] 2026-03-10 07:32:07,338 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/7
[2026-03-10 08:32:56] 2026-03-10 07:32:07,353 | INFO     | sufficient remaining disk space (19937624064 B)
[2026-03-10 08:32:56] 2026-03-10 07:32:07,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:32:56] 2026-03-10 07:32:07,353 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:32:56] 2026-03-10 07:32:07,353 | INFO     | update_server=False
[2026-03-10 08:32:56] 2026-03-10 07:32:07,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:32:56] 2026-03-10 07:32:07,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:32:56] 2026-03-10 07:32:07,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:32:56] 2026-03-10 07:32:07,472 | INFO     | aborting loop
[2026-03-10 08:32:56] 2026-03-10 07:32:07,793 | INFO     | all job control threads have been joined
[2026-03-10 08:32:56] 2026-03-10 07:32:07,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:32:56] 2026-03-10 07:32:08,090 | INFO     | all data control threads have been joined
[2026-03-10 08:32:56] 2026-03-10 07:32:08,287 | INFO     | all payload control threads have been joined
[2026-03-10 08:32:56] 2026-03-10 07:32:08,358 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:08,477 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:08,673 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:08,799 | INFO     | [job] control thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:08,830 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,095 | INFO     | [data] control thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,186 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,227 | INFO     | [job] validate thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,292 | INFO     | [payload] control thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,340 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,379 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,394 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,418 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:09,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:32:56] 2026-03-10 07:32:10,701 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:11,924 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:17,876 | INFO     | job.realtimelogging is not enabled
[2026-03-10 08:32:56] 2026-03-10 07:32:18,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:32:56] 2026-03-10 07:32:37,085 | INFO     | PID=1174467 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 08:32:56] 2026-03-10 07:32:37,085 | INFO     | .. there are 61 such processes running
[2026-03-10 08:32:56] 2026-03-10 07:32:37,085 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:32:56] 2026-03-10 07:32:37,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:32:56] 2026-03-10 07:32:37,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:32:56] 2026-03-10 07:32:49,536 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:32:56] 2026-03-10 07:32:51,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22723379885888)>', '<ExcThread(monitor, started 22723144468224)>']
[2026-03-10 08:32:56] 2026-03-10 07:32:52,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:32:56] 2026-03-10 07:32:52,161 | INFO     | [monitor] control thread has ended
[2026-03-10 08:32:56] 2026-03-10 07:32:56,462 | INFO     | all workflow threads have been joined
[2026-03-10 08:32:56] 2026-03-10 07:32:56,462 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:32:56] 2026-03-10 07:32:56,462 | INFO     | traces error code: 0
[2026-03-10 08:32:56] 2026-03-10 07:32:56,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:32:56] 2026-03-10 07:32:56,579 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:32:56] 2026-03-10 07:32:56,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:32:56] 2026-03-10 07:32:56,588 [wrapper] pilotpid: 1174467
[2026-03-10 08:32:56] 2026-03-10 07:32:56,590 [wrapper] Pilot exit status: 0
[2026-03-10 08:32:56] 2026-03-10 07:32:56,597 [wrapper] pandaids: 7040898275
[2026-03-10 08:32:56] 2026-03-10 07:32:56,710 [wrapper] cleanup supervisor_pilot 2053326 1174468
[2026-03-10 08:32:56] 2026-03-10 07:32:56,713 [wrapper] Test setup, not cleaning
[2026-03-10 08:32:56] 2026-03-10 07:32:56,715 [wrapper] apfmon messages muted
[2026-03-10 08:32:56] 2026-03-10 07:32:56,720 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:32:56] 2026-03-10 07:32:56,722 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:32:56]  *** Error codes and diagnostics ***
[2026-03-10 08:32:56]     "exeErrorCode": 0,
[2026-03-10 08:32:56]     "exeErrorDiag": "",
[2026-03-10 08:32:56]     "pilotErrorCode": 0,
[2026-03-10 08:32:56]     "pilotErrorDiag": "",
[2026-03-10 08:32:56]  *** Listing of results directory ***
[2026-03-10 08:32:56] total 617032
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc      5111 Mar  9 16:43 queuedata.json
[2026-03-10 08:32:56] -rwx------. 1 boinc boinc     36322 Mar  9 16:44 runpilot2-wrapper.sh
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc       100 Mar 10 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:32:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 07:10 run_atlas
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc       105 Mar 10 07:10 job.xml
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc      6705 Mar 10 07:10 init_data.xml
[2026-03-10 08:32:56] -rw-r--r--. 2 boinc boinc 440241027 Mar 10 07:10 EVNT.46701403._001378.pool.root.1
[2026-03-10 08:32:56] drwxrwx--x. 2 boinc boinc      4096 Mar 10 07:10 shared
[2026-03-10 08:32:56] -rw-r--r--. 2 boinc boinc    597967 Mar 10 07:10 input.tar.gz
[2026-03-10 08:32:56] -rw-r--r--. 2 boinc boinc     15845 Mar 10 07:10 start_atlas.sh
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc         0 Mar 10 07:10 boinc_lockfile
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc      2563 Mar 10 07:10 pandaJob.out
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc   1005073 Mar 10 07:10 agis_schedconf.cvmfs.json
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc   1511578 Mar 10 07:10 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc       439 Mar 10 07:10 workernode_map.json
[2026-03-10 08:32:56] drwx------. 5 boinc boinc      4096 Mar 10 07:10 pilot3
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc 185623525 Mar 10 08:31 HITS.48955010._018943.pool.root.1
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc       530 Mar 10 08:31 boinc_task_state.xml
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc        95 Mar 10 08:31 pilot_heartbeat.json
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc      1031 Mar 10 08:31 memory_monitor_summary.json
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc    304196 Mar 10 08:32 log.48955010._018943.job.log.tgz.1
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc      6348 Mar 10 08:32 heartbeat.json
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc      8192 Mar 10 08:32 boinc_mmap_file
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc        27 Mar 10 08:32 wrapper_checkpoint.txt
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc      4901 Mar 10 08:32 pilotlog.txt
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc    714774 Mar 10 08:32 log.48955010._018943.job.log.1
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc       357 Mar 10 08:32 output.list
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc       620 Mar 10 08:32 runtime_log
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc   1034240 Mar 10 08:32 result.tar.gz
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc      9204 Mar 10 08:32 runtime_log.err
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc       662 Mar 10 08:32 8xRLDmYxrJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmExcLDm85kxNm.diag
[2026-03-10 08:32:56] -rw-r--r--. 1 boinc boinc     21219 Mar 10 08:32 stderr.txt
[2026-03-10 08:32:56] HITS file was successfully produced:
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc 185623525 Mar 10 08:31 shared/HITS.pool.root.1
[2026-03-10 08:32:56]  *** Contents of shared directory: ***
[2026-03-10 08:32:56] total 612820
[2026-03-10 08:32:56] -rw-r--r--. 2 boinc boinc 440241027 Mar 10 07:10 ATLAS.root_0
[2026-03-10 08:32:56] -rw-r--r--. 2 boinc boinc    597967 Mar 10 07:10 input.tar.gz
[2026-03-10 08:32:56] -rw-r--r--. 2 boinc boinc     15845 Mar 10 07:10 start_atlas.sh
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc 185623525 Mar 10 08:31 HITS.pool.root.1
[2026-03-10 08:32:56] -rw-------. 1 boinc boinc   1034240 Mar 10 08:32 result.tar.gz
08:32:58 (1166784): run_atlas exited; CPU time 18710.121738
08:32:58 (1166784): called boinc_finish(0)

</stderr_txt>
]]>

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