Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:28:44 (13244): wrapper (7.7.26015): starting
15:28:44 (13244): wrapper: running run_atlas (--nthreads 8)
[2026-03-09 15:28:44] Arguments: --nthreads 8
[2026-03-09 15:28:44] Threads: 8
[2026-03-09 15:28:44] Checking for CVMFS
[2026-03-09 15:28:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-09 15:28:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-09 15:28:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-09 15:28:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-09 15:28:44] 2.11.2.0 10718 266451 158684 157088 0 50 9588784 18432000 1833 130560 0 170398769 99.982 9783621 29155 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-09 15:28:44] CVMFS is ok
[2026-03-09 15:28:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 15:28:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 15:28:44] Further information can be found at the LHC@home message board.
[2026-03-09 15:28:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 15:28:44] Checking for apptainer binary...
[2026-03-09 15:28:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-09 15:28:44] Running /usr/bin/apptainer --version
[2026-03-09 15:28:44] apptainer version 1.3.2-1.el7
[2026-03-09 15:28:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 15:28:45] c-206-2.aglt2.org
[2026-03-09 15:28:45] apptainer works
[2026-03-09 15:28:45] Set ATHENA_PROC_NUMBER=8
[2026-03-09 15:28:45] Set ATHENA_CORE_NUMBER=8
[2026-03-09 15:28:45] Starting ATLAS job with PandaID=7035243833
[2026-03-09 15:28:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 18:52:25]  *** The last 200 lines of the pilot log: ***
[2026-03-09 18:52:25] 2026-03-09 22:51:48,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 18:52:25] 2026-03-09 22:51:48,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 18:52:25] 2026-03-09 22:51:48,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 18:52:25] 2026-03-09 22:51:48,102 | INFO     | fitting pss+swap vs Time
[2026-03-09 18:52:25] 2026-03-09 22:51:48,102 | INFO     | sum of square deviations: 2443580700.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,104 | INFO     | sum of deviations: -14610103595.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,104 | INFO     | mean x: 1773090601.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,104 | INFO     | mean y: 2554797.351758794
[2026-03-09 18:52:25] 2026-03-09 22:51:48,105 | INFO     | intersect: 10603816038.255655
[2026-03-09 18:52:25] 2026-03-09 22:51:48,105 | INFO     | chi2: 1.6258414605768368
[2026-03-09 18:52:25] 2026-03-09 22:51:48,105 | INFO     | sum of square deviations: 2263977332.5
[2026-03-09 18:52:25] 2026-03-09 22:51:48,107 | INFO     | sum of deviations: -13834048967.999998
[2026-03-09 18:52:25] 2026-03-09 22:51:48,107 | INFO     | mean x: 1773090448.5
[2026-03-09 18:52:25] 2026-03-09 22:51:48,107 | INFO     | mean y: 2555456.432989691
[2026-03-09 18:52:25] 2026-03-09 22:51:48,108 | INFO     | intersect: 10837036763.785954
[2026-03-09 18:52:25] 2026-03-09 22:51:48,108 | INFO     | chi2: 1.6251551289233155
[2026-03-09 18:52:25] 2026-03-09 22:51:48,108 | INFO     | current chi2=1.6251551289233155 (change=0.04221393476321927 %)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,108 | INFO     | right removable region: 193
[2026-03-09 18:52:25] 2026-03-09 22:51:48,109 | INFO     | sum of square deviations: 2263977332.5
[2026-03-09 18:52:25] 2026-03-09 22:51:48,110 | INFO     | sum of deviations: -44703199099.49999
[2026-03-09 18:52:25] 2026-03-09 22:51:48,111 | INFO     | mean x: 1773090753.5
[2026-03-09 18:52:25] 2026-03-09 22:51:48,111 | INFO     | mean y: 2580058.6340206186
[2026-03-09 18:52:25] 2026-03-09 22:51:48,111 | INFO     | intersect: 35013014057.84145
[2026-03-09 18:52:25] 2026-03-09 22:51:48,111 | INFO     | chi2: 0.1990712350252301
[2026-03-09 18:52:25] 2026-03-09 22:51:48,112 | INFO     | current chi2=0.1990712350252301 (change=87.75580277337735 %)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,112 | INFO     | sum of square deviations: 2093397390.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,114 | INFO     | sum of deviations: -44464199178.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,114 | INFO     | mean x: 1773090906.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,114 | INFO     | mean y: 2579795.206349206
[2026-03-09 18:52:25] 2026-03-09 22:51:48,114 | INFO     | intersect: 37663402141.547615
[2026-03-09 18:52:25] 2026-03-09 22:51:48,115 | INFO     | chi2: 0.17581996197256722
[2026-03-09 18:52:25] 2026-03-09 22:51:48,115 | INFO     | current chi2=0.17581996197256722 (change=11.679875824207372 %)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,115 | INFO     | left removable region: 20
[2026-03-09 18:52:25] 2026-03-09 22:51:48,115 | INFO     | sum of square deviations: 1605470102.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,117 | INFO     | sum of deviations: -32841927006.000015
[2026-03-09 18:52:25] 2026-03-09 22:51:48,117 | INFO     | mean x: 1773091028.0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,117 | INFO     | mean y: 2571194.6531791906
[2026-03-09 18:52:25] 2026-03-09 22:51:48,117 | INFO     | intersect: 36273396820.13689
[2026-03-09 18:52:25] 2026-03-09 22:51:48,118 | INFO     | chi2: 0.164700503770434
[2026-03-09 18:52:25] 2026-03-09 22:51:48,118 | INFO     | current memory leak: -20.46 B/s (using 173 data points, chi2=0.16)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,118 | INFO     | could have reported an average CPU frequency of 2483 MHz (10 samples)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,119 | INFO     | ..............................
[2026-03-09 18:52:25] 2026-03-09 22:51:48,119 | INFO     | . Timing measurements:
[2026-03-09 18:52:25] 2026-03-09 22:51:48,119 | INFO     | . get job = 0 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,119 | INFO     | . initial setup = 5 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,119 | INFO     | . payload setup = 5 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,120 | INFO     | . stage-in = 0 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,120 | INFO     | . payload execution = 12142 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,120 | INFO     | . stage-out = 2 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,120 | INFO     | . log creation = 0 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,120 | INFO     | ..............................
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | 
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | job summary report
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | --------------------------------------------------
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | PanDA job id: 7035243833
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | task id: 48845188
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | errors: (none)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,664 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | pilot state: finished 
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | transexitcode: 0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | exeerrorcode: 0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | exeerrordiag: 
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | exitcode: 0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | exitmsg: OK
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | cpuconsumptiontime: 92212 s
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | nevents: 400
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | neventsw: 0
[2026-03-09 18:52:25] 2026-03-09 22:51:48,665 | INFO     | pid: 21760
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | pgrp: 21760
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | corecount: 8
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | event service: False
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | sizes: {0: 2279869, 1: 2280330, 12: 2280330, 12151: 2309970, 12153: 2318968, 12154: 2319024, 12155: 2319346}
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | --------------------------------------------------
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | 
[2026-03-09 18:52:25] 2026-03-09 22:51:48,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-09 18:52:25] 2026-03-09 22:51:48,683 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,683 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,683 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,683 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | job 7035243833 has completed (purged errors)
[2026-03-09 18:52:25] 2026-03-09 22:51:48,685 | INFO     | overall cleanup function is called
[2026-03-09 18:52:25] 2026-03-09 22:51:49,694 | INFO     | --- collectZombieJob: --- 10, [21760]
[2026-03-09 18:52:25] 2026-03-09 22:51:49,694 | INFO     | zombie collector waiting for pid 21760
[2026-03-09 18:52:25] 2026-03-09 22:51:49,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 18:52:25] 2026-03-09 22:51:49,695 | INFO     | collected zombie processes
[2026-03-09 18:52:25] 2026-03-09 22:51:49,695 | INFO     | will attempt to kill all subprocesses of pid=21760
[2026-03-09 18:52:25] 2026-03-09 22:51:49,993 | INFO     | process IDs to be killed: [21760] (in reverse order)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,001 | WARNING  | process 21760 can no longer be monitored (due to stat problems) - aborting
[2026-03-09 18:52:25] 2026-03-09 22:51:50,065 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 18:52:25] 2026-03-09 22:51:50,077 | INFO     | did not find any defunct processes belonging to 21760
[2026-03-09 18:52:25] 2026-03-09 22:51:50,116 | INFO     | did not find any defunct processes belonging to 21760
[2026-03-09 18:52:25] 2026-03-09 22:51:50,116 | INFO     | ready for new job
[2026-03-09 18:52:25] 2026-03-09 22:51:50,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 18:52:25] 2026-03-09 22:51:50,119 | INFO     | **************************************
[2026-03-09 18:52:25] 2026-03-09 22:51:50,119 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 18:52:25] 2026-03-09 22:51:50,119 | INFO     | **************************************
[2026-03-09 18:52:25] 2026-03-09 22:51:50,120 | INFO     | 
[2026-03-09 18:52:25] 2026-03-09 22:51:50,121 | INFO     | architecture information:
[2026-03-09 18:52:25] 2026-03-09 22:51:50,122 | INFO     | executing command: cat /etc/os-release
[2026-03-09 18:52:25] 2026-03-09 22:51:50,145 | INFO     | cat /etc/os-release:
[2026-03-09 18:52:25] NAME="CentOS Linux"
[2026-03-09 18:52:25] VERSION="7 (Core)"
[2026-03-09 18:52:25] ID="centos"
[2026-03-09 18:52:25] ID_LIKE="rhel fedora"
[2026-03-09 18:52:25] VERSION_ID="7"
[2026-03-09 18:52:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 18:52:25] ANSI_COLOR="0;31"
[2026-03-09 18:52:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 18:52:25] HOME_URL="https://www.centos.org/"
[2026-03-09 18:52:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 18:52:25] 
[2026-03-09 18:52:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 18:52:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 18:52:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 18:52:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 18:52:25] 
[2026-03-09 18:52:25] 2026-03-09 22:51:50,145 | INFO     | **************************************
[2026-03-09 18:52:25] 2026-03-09 22:51:50,155 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,155 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,156 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-09 18:52:25] 2026-03-09 22:51:50,156 | WARNING  | maxPSS not found in memory monitor output
[2026-03-09 18:52:25] 2026-03-09 22:51:50,157 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7035243833/payload.stdout) since it has not been created yet
[2026-03-09 18:52:25] 2026-03-09 22:51:50,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-09 18:52:25] 2026-03-09 22:51:50,169 | INFO     | sufficient remaining disk space (27269267456 B)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,169 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-09 18:52:25] 2026-03-09 22:51:50,169 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7035243833/HITS.48845188._000015.pool.root.1 since it does not exist
[2026-03-09 18:52:25] 2026-03-09 22:51:50,280 | INFO     | number of running child processes to parent process 21760: 1
[2026-03-09 18:52:25] 2026-03-09 22:51:50,281 | INFO     | maximum number of monitored processes: 6
[2026-03-09 18:52:25] 2026-03-09 22:51:50,281 | INFO     | aborting job monitoring since job object (job id=7035243833) has expired
[2026-03-09 18:52:25] 2026-03-09 22:51:50,649 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-09 18:52:25] 2026-03-09 22:51:50,666 | INFO     | sufficient remaining disk space (27269267456 B)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 18:52:25] 2026-03-09 22:51:50,667 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 18:52:25] 2026-03-09 22:51:50,667 | INFO     | update_server=False
[2026-03-09 18:52:25] 2026-03-09 22:51:50,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 18:52:25] 2026-03-09 22:51:50,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:52:25] 2026-03-09 22:51:50,668 | INFO     | will abort loop
[2026-03-09 18:52:25] 2026-03-09 22:51:50,724 | INFO     | all job control threads have been joined
[2026-03-09 18:52:25] 2026-03-09 22:51:51,401 | INFO     | all data control threads have been joined
[2026-03-09 18:52:25] 2026-03-09 22:51:51,673 | INFO     | [job] retrieve thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:51,674 | INFO     | [job] job monitor thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:51,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 18:52:25] 2026-03-09 22:51:51,729 | INFO     | [job] control thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:51,781 | INFO     | all payload control threads have been joined
[2026-03-09 18:52:25] 2026-03-09 22:51:52,147 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,152 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,160 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,176 | INFO     | [data] copytool_in thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,406 | INFO     | [data] control thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,687 | INFO     | [payload] validate_post thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,736 | INFO     | [payload] failed_post thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,787 | INFO     | [payload] control thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:52,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 18:52:25] 2026-03-09 22:51:53,074 | INFO     | [job] validate thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:53,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 18:52:25] 2026-03-09 22:51:53,716 | INFO     | [data] copytool_out thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:54,274 | INFO     | [job] queue monitor thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:51:56,968 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:52:01,567 | INFO     | job.realtimelogging is not enabled
[2026-03-09 18:52:25] 2026-03-09 22:52:02,572 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 18:52:25] 2026-03-09 22:52:20,079 | INFO     | PID=17206 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-09 18:52:25] 2026-03-09 22:52:20,079 | INFO     | .. there are 3 such processes running
[2026-03-09 18:52:25] 2026-03-09 22:52:20,080 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 18:52:25] 2026-03-09 22:52:20,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 18:52:25] 2026-03-09 22:52:20,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 18:52:25] 2026-03-09 22:52:20,370 | INFO     | [monitor] cgroup control has ended
[2026-03-09 18:52:25] 2026-03-09 22:52:20,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537956333376)>', '<ExcThread(monitor, started 140537285826304)>']
[2026-03-09 18:52:25] 2026-03-09 22:52:21,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 18:52:25] 2026-03-09 22:52:21,100 | INFO     | [monitor] control thread has ended
[2026-03-09 18:52:25] 2026-03-09 22:52:25,547 | INFO     | all workflow threads have been joined
[2026-03-09 18:52:25] 2026-03-09 22:52:25,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 18:52:25] 2026-03-09 22:52:25,547 | INFO     | traces error code: 0
[2026-03-09 18:52:25] 2026-03-09 22:52:25,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 18:52:25] 2026-03-09 22:52:25,673 [wrapper] ==== pilot stdout END ====
[2026-03-09 18:52:25] 2026-03-09 22:52:25,676 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 18:52:25] 2026-03-09 22:52:25,678 [wrapper] pilotpid: 17206
[2026-03-09 18:52:25] 2026-03-09 22:52:25,681 [wrapper] Pilot exit status: 0
[2026-03-09 18:52:25] 2026-03-09 22:52:25,698 [wrapper] pandaids: 7035243833
[2026-03-09 18:52:25] 2026-03-09 22:52:25,738 [wrapper] cleanup supervisor_pilot 31737 17207
[2026-03-09 18:52:25] 2026-03-09 22:52:25,741 [wrapper] Test setup, not cleaning
[2026-03-09 18:52:25] 2026-03-09 22:52:25,744 [wrapper] apfmon messages muted
[2026-03-09 18:52:25] 2026-03-09 22:52:25,747 [wrapper] ==== wrapper stdout END ====
[2026-03-09 18:52:25] 2026-03-09 22:52:25,749 [wrapper] ==== wrapper stderr END ====
[2026-03-09 18:52:25]  *** Error codes and diagnostics ***
[2026-03-09 18:52:25]     "exeErrorCode": 0,
[2026-03-09 18:52:25]     "exeErrorDiag": "",
[2026-03-09 18:52:25]     "pilotErrorCode": 0,
[2026-03-09 18:52:25]     "pilotErrorDiag": "",
[2026-03-09 18:52:25]  *** Listing of results directory ***
[2026-03-09 18:52:25] total 513008
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas      5111 Mar  1 11:16 queuedata.json
[2026-03-09 18:52:25] -rwx------ 1 boincer umatlas     36322 Mar  1 11:16 runpilot2-wrapper.sh
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas    584627 Mar  1 11:16 pilot3.tar.gz
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas       100 Mar  9 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 18:52:25] -rwxr-xr-x 1 boincer umatlas      7986 Mar  9 15:28 run_atlas
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas       105 Mar  9 15:28 job.xml
[2026-03-09 18:52:25] -rw-r--r-- 2 boincer umatlas 293359139 Mar  9 15:28 EVNT.48449692._000001.pool.root.1
[2026-03-09 18:52:25] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 15:28 start_atlas.sh
[2026-03-09 18:52:25] drwxrwx--x 2 boincer umatlas      4096 Mar  9 15:28 shared
[2026-03-09 18:52:25] -rw-r--r-- 2 boincer umatlas    597976 Mar  9 15:28 input.tar.gz
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas         0 Mar  9 15:28 boinc_lockfile
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas      2618 Mar  9 15:28 pandaJob.out
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas        57 Mar  9 15:28 setup.sh.local
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas   1002746 Mar  9 15:28 agis_schedconf.cvmfs.json
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas       432 Mar  9 15:28 workernode_map.json
[2026-03-09 18:52:25] drwx------ 5 boincer umatlas      4096 Mar  9 15:29 pilot3
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas      5950 Mar  9 18:46 init_data.xml
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas 223719550 Mar  9 18:51 HITS.48845188._000015.pool.root.1
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas       530 Mar  9 18:51 boinc_task_state.xml
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas      1054 Mar  9 18:51 memory_monitor_summary.json
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas   1511578 Mar  9 18:51 agis_ddmendpoints.agis.ALL.json
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas    438293 Mar  9 18:51 log.48845188._000015.job.log.tgz.1
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas      6404 Mar  9 18:51 heartbeat.json
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas      8192 Mar  9 18:52 boinc_mmap_file
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas        28 Mar  9 18:52 wrapper_checkpoint.txt
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas        95 Mar  9 18:52 pilot_heartbeat.json
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas      6258 Mar  9 18:52 pilotlog.txt
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas   1710627 Mar  9 18:52 log.48845188._000015.job.log.1
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas       357 Mar  9 18:52 output.list
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas       620 Mar  9 18:52 runtime_log
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas   2170880 Mar  9 18:52 result.tar.gz
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas      9337 Mar  9 18:52 runtime_log.err
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas       660 Mar  9 18:52 DA9NDmwdyG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmd78KDmyHuVXo.diag
[2026-03-09 18:52:25] -rw-r--r-- 1 boincer umatlas     21430 Mar  9 18:52 stderr.txt
[2026-03-09 18:52:25] HITS file was successfully produced:
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas 223719550 Mar  9 18:51 shared/HITS.pool.root.1
[2026-03-09 18:52:25]  *** Contents of shared directory: ***
[2026-03-09 18:52:25] total 507692
[2026-03-09 18:52:25] -rw-r--r-- 2 boincer umatlas 293359139 Mar  9 15:28 ATLAS.root_0
[2026-03-09 18:52:25] -rw-r--r-- 2 boincer umatlas     15845 Mar  9 15:28 start_atlas.sh
[2026-03-09 18:52:25] -rw-r--r-- 2 boincer umatlas    597976 Mar  9 15:28 input.tar.gz
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas 223719550 Mar  9 18:51 HITS.pool.root.1
[2026-03-09 18:52:25] -rw------- 1 boincer umatlas   2170880 Mar  9 18:52 result.tar.gz
18:52:26 (13244): run_atlas exited; CPU time 92378.746281
18:52:26 (13244): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN