Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:43:59 (3246409): wrapper (7.7.26015): starting
19:43:59 (3246409): wrapper: running run_atlas (--nthreads 3)
[2026-03-10 19:43:59] Arguments: --nthreads 3
[2026-03-10 19:43:59] Threads: 3
[2026-03-10 19:43:59] Checking for CVMFS
[2026-03-10 19:43:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 19:43:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 19:43:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 19:43:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 19:43:59] 2.9.2.0 49769 18867 81372 157126 2 50 21810230 36864000 0 130560 0 7359764 99.982 704145 12192 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 19:43:59] CVMFS is ok
[2026-03-10 19:43:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 19:43:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 19:43:59] Further information can be found at the LHC@home message board.
[2026-03-10 19:43:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 19:43:59] Checking for apptainer binary...
[2026-03-10 19:43:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 19:43:59] Running /usr/bin/apptainer --version
[2026-03-10 19:43:59] apptainer version 1.4.1-1.1
[2026-03-10 19:43:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 19:43:59] cosA121a
[2026-03-10 19:43:59] apptainer works
[2026-03-10 19:43:59] Set ATHENA_PROC_NUMBER=3
[2026-03-10 19:43:59] Set ATHENA_CORE_NUMBER=3
[2026-03-10 19:43:59] Starting ATLAS job with PandaID=7047365443
[2026-03-10 19:43:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 21:25:23]  *** The last 200 lines of the pilot log: ***
[2026-03-10 21:25:23] 2026-03-10 20:24:42,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:25:23] 2026-03-10 20:24:42,097 | INFO     | all data control threads have been joined
[2026-03-10 21:25:23] 2026-03-10 20:24:42,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:25:23] 2026-03-10 20:24:42,395 | INFO     | aborting loop
[2026-03-10 21:25:23] 2026-03-10 20:24:43,036 | INFO     | [job] retrieve thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,037 | INFO     | [job] queue monitor thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,060 | INFO     | all payload control threads have been joined
[2026-03-10 21:25:23] 2026-03-10 20:24:43,103 | INFO     | [data] control thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,144 | INFO     | [data] copytool_in thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,218 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,297 | INFO     | all job control threads have been joined
[2026-03-10 21:25:23] 2026-03-10 20:24:43,400 | INFO     | [payload] failed_post thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,401 | INFO     | [job] job monitor thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:43,951 | INFO     | [payload] validate_post thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:44,032 | INFO     | [data] copytool_out thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:44,066 | INFO     | [payload] control thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:44,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 21:25:23] 2026-03-10 20:24:44,303 | INFO     | [job] control thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:44,404 | INFO     | [job] validate thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:44,443 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:44,511 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:24:48,238 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 21:25:23] 2026-03-10 20:25:11,754 | INFO     | PID=3250452 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 21:25:23] 2026-03-10 20:25:11,754 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 21:25:23] 2026-03-10 20:25:11,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 21:25:23] 2026-03-10 20:25:11,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 21:25:23] 2026-03-10 20:25:17,391 | INFO     | [monitor] cgroup control has ended
[2026-03-10 21:25:23] 2026-03-10 20:25:18,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958976976704)>', '<ExcThread(monitor, started 139958329263872)>']
[2026-03-10 21:25:23] 2026-03-10 20:25:18,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 21:25:23] 2026-03-10 20:25:18,792 | INFO     | [monitor] control thread has ended
[2026-03-10 21:25:23] 2026-03-10 20:25:23,667 | INFO     | all workflow threads have been joined
[2026-03-10 21:25:23] 2026-03-10 20:25:23,667 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 21:25:23] 2026-03-10 20:25:23,667 | INFO     | traces error code: 0
[2026-03-10 21:25:23] 2026-03-10 20:25:23,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 21:25:23] 2026-03-10 20:25:23,719 [wrapper] ==== pilot stdout END ====
[2026-03-10 21:25:23] 2026-03-10 20:25:23,722 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 21:25:23] 2026-03-10 20:25:23,724 [wrapper] pilotpid: 3250452
[2026-03-10 21:25:23] 2026-03-10 20:25:23,726 [wrapper] Pilot exit status: 0
[2026-03-10 21:25:23] 2026-03-10 20:25:23,734 [wrapper] pandaids: 7047365443
[2026-03-10 21:25:23] 2026-03-10 20:25:23,753 [wrapper] cleanup supervisor_pilot 3265073 3250453
[2026-03-10 21:25:23] 2026-03-10 20:25:23,756 [wrapper] Test setup, not cleaning
[2026-03-10 21:25:23] 2026-03-10 20:25:23,758 [wrapper] apfmon messages muted
[2026-03-10 21:25:23] 2026-03-10 20:25:23,761 [wrapper] ==== wrapper stdout END ====
[2026-03-10 21:25:23] 2026-03-10 20:25:23,763 [wrapper] ==== wrapper stderr END ====
[2026-03-10 21:25:23]  *** Error codes and diagnostics ***
[2026-03-10 21:25:23]     "exeErrorCode": 0,
[2026-03-10 21:25:23]     "exeErrorDiag": "",
[2026-03-10 21:25:23]     "pilotErrorCode": 0,
[2026-03-10 21:25:23]     "pilotErrorDiag": "",
[2026-03-10 21:25:23]  *** Listing of results directory ***
[2026-03-10 21:25:23] total 406292
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc    584627 Mar  9 14:02 pilot3.tar.gz
[2026-03-10 21:25:23] -rwx------ 1 boinc boinc     36322 Mar  9 15:06 runpilot2-wrapper.sh
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc      5111 Mar  9 15:06 queuedata.json
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc       100 Mar 10 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 21:25:23] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 19:43 run_atlas
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc       105 Mar 10 19:43 job.xml
[2026-03-10 21:25:23] -rw-r--r-- 2 boinc boinc 211159402 Mar 10 19:43 EVNT.48966985._000905.pool.root.1
[2026-03-10 21:25:23] -rw-r--r-- 2 boinc boinc    597966 Mar 10 19:43 input.tar.gz
[2026-03-10 21:25:23] -rw-r--r-- 2 boinc boinc     15845 Mar 10 19:43 start_atlas.sh
[2026-03-10 21:25:23] drwxrwx--x 2 boinc boinc      4096 Mar 10 19:43 shared
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc         0 Mar 10 19:43 boinc_setup_complete
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc      6440 Mar 10 19:43 init_data.xml
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc         0 Mar 10 19:43 boinc_lockfile
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc      2592 Mar 10 19:43 pandaJob.out
[2026-03-10 21:25:23] -rw------- 1 boinc boinc   1006644 Mar 10 19:44 agis_schedconf.cvmfs.json
[2026-03-10 21:25:23] -rw------- 1 boinc boinc   1511578 Mar 10 19:44 agis_ddmendpoints.agis.ALL.json
[2026-03-10 21:25:23] -rw------- 1 boinc boinc       419 Mar 10 19:44 workernode_map.json
[2026-03-10 21:25:23] drwx------ 5 boinc boinc      4096 Mar 10 19:44 pilot3
[2026-03-10 21:25:23] -rw------- 1 boinc boinc 198708845 Mar 10 21:24 HITS.48966988._023248.pool.root.1
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc       529 Mar 10 21:24 boinc_task_state.xml
[2026-03-10 21:25:23] -rw------- 1 boinc boinc      1020 Mar 10 21:24 memory_monitor_summary.json
[2026-03-10 21:25:23] -rw------- 1 boinc boinc    257870 Mar 10 21:24 log.48966988._023248.job.log.tgz.1
[2026-03-10 21:25:23] -rw------- 1 boinc boinc      6307 Mar 10 21:24 heartbeat.json
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc        27 Mar 10 21:25 wrapper_checkpoint.txt
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc      8192 Mar 10 21:25 boinc_mmap_file
[2026-03-10 21:25:23] -rw------- 1 boinc boinc        95 Mar 10 21:25 pilot_heartbeat.json
[2026-03-10 21:25:23] -rw------- 1 boinc boinc      4748 Mar 10 21:25 pilotlog.txt
[2026-03-10 21:25:23] -rw------- 1 boinc boinc    871982 Mar 10 21:25 log.48966988._023248.job.log.1
[2026-03-10 21:25:23] -rw------- 1 boinc boinc       357 Mar 10 21:25 output.list
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc       620 Mar 10 21:25 runtime_log
[2026-03-10 21:25:23] -rw------- 1 boinc boinc   1146880 Mar 10 21:25 result.tar.gz
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc      8906 Mar 10 21:25 runtime_log.err
[2026-03-10 21:25:23] -rw------- 1 boinc boinc       659 Mar 10 21:25 T0vLDmqQqJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9zZLDm0atrQo.diag
[2026-03-10 21:25:23] -rw-r--r-- 1 boinc boinc      7068 Mar 10 21:25 stderr.txt
[2026-03-10 21:25:23] HITS file was successfully produced:
[2026-03-10 21:25:23] -rw------- 1 boinc boinc 198708845 Mar 10 21:24 shared/HITS.pool.root.1
[2026-03-10 21:25:23]  *** Contents of shared directory: ***
[2026-03-10 21:25:23] total 401992
[2026-03-10 21:25:23] -rw-r--r-- 2 boinc boinc 211159402 Mar 10 19:43 ATLAS.root_0
[2026-03-10 21:25:23] -rw-r--r-- 2 boinc boinc    597966 Mar 10 19:43 input.tar.gz
[2026-03-10 21:25:23] -rw-r--r-- 2 boinc boinc     15845 Mar 10 19:43 start_atlas.sh
[2026-03-10 21:25:23] -rw------- 1 boinc boinc 198708845 Mar 10 21:24 HITS.pool.root.1
[2026-03-10 21:25:23] -rw------- 1 boinc boinc   1146880 Mar 10 21:25 result.tar.gz
21:25:25 (3246409): run_atlas exited; CPU time 17291.633769
21:25:25 (3246409): called boinc_finish(0)

</stderr_txt>
]]>

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