Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:13:05 (14024): wrapper (7.7.26015): starting
03:13:05 (14024): wrapper: running run_atlas (--nthreads 8)
[2026-03-10 03:13:05] Arguments: --nthreads 8
[2026-03-10 03:13:05] Threads: 8
[2026-03-10 03:13:05] Checking for CVMFS
[2026-03-10 03:13:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 03:13:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 03:13:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 03:13:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 03:13:08] 2.11.2.0 26786 121199 106628 157097 0 56 20510151 25165825 899 130560 153 43370150 99.830 32159560 1046 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-10 03:13:08] CVMFS is ok
[2026-03-10 03:13:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 03:13:08] Checking for apptainer binary...
[2026-03-10 03:13:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 03:13:08] Running /usr/bin/apptainer --version
[2026-03-10 03:13:09] apptainer version 1.3.2-1.el7
[2026-03-10 03:13:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 03:13:36] cg-vwn410.simple-grid.lan
[2026-03-10 03:13:36] apptainer works
[2026-03-10 03:13:36] Set ATHENA_PROC_NUMBER=8
[2026-03-10 03:13:36] Set ATHENA_CORE_NUMBER=8
[2026-03-10 03:13:36] Starting ATLAS job with PandaID=7047420071
[2026-03-10 03:13:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 08:26:19]  *** The last 200 lines of the pilot log: ***
[2026-03-10 08:26:19] 2026-03-10 07:25:07,665 | INFO     | total number of processed events: 400 (read)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,667 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7047420071/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,667 | INFO     | extracted standard info from prmon json
[2026-03-10 08:26:19] 2026-03-10 07:25:07,668 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 08:26:19] 2026-03-10 07:25:07,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 08:26:19] 2026-03-10 07:25:07,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 08:26:19] 2026-03-10 07:25:07,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 08:26:19] 2026-03-10 07:25:07,674 | INFO     | fitting pss+swap vs Time
[2026-03-10 08:26:19] 2026-03-10 07:25:07,675 | INFO     | sum of square deviations: 8041713570.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,678 | INFO     | sum of deviations: 121530780252.99998
[2026-03-10 08:26:19] 2026-03-10 07:25:07,678 | INFO     | mean x: 1773118475.5
[2026-03-10 08:26:19] 2026-03-10 07:25:07,679 | INFO     | mean y: 2439614.121621622
[2026-03-10 08:26:19] 2026-03-10 07:25:07,679 | INFO     | intersect: -26793897998.848698
[2026-03-10 08:26:19] 2026-03-10 07:25:07,679 | INFO     | chi2: 8.970651180583408
[2026-03-10 08:26:19] 2026-03-10 07:25:07,680 | INFO     | sum of square deviations: 7641036290.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,683 | INFO     | sum of deviations: 139481379817.00003
[2026-03-10 08:26:19] 2026-03-10 07:25:07,683 | INFO     | mean x: 1773118323.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,683 | INFO     | mean y: 2446340.2508591064
[2026-03-10 08:26:19] 2026-03-10 07:25:07,683 | INFO     | intersect: -32364497210.9157
[2026-03-10 08:26:19] 2026-03-10 07:25:07,684 | INFO     | chi2: 8.213682365995098
[2026-03-10 08:26:19] 2026-03-10 07:25:07,684 | INFO     | current chi2=8.213682365995098 (change=8.43828167376229 %)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,684 | INFO     | right removable region: 290
[2026-03-10 08:26:19] 2026-03-10 07:25:07,685 | INFO     | sum of square deviations: 7641036290.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,688 | INFO     | sum of deviations: 16896421170.999996
[2026-03-10 08:26:19] 2026-03-10 07:25:07,688 | INFO     | mean x: 1773118628.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,688 | INFO     | mean y: 2479421.0412371135
[2026-03-10 08:26:19] 2026-03-10 07:25:07,688 | INFO     | intersect: -3918370839.0265203
[2026-03-10 08:26:19] 2026-03-10 07:25:07,689 | INFO     | chi2: 3.8474042289024872
[2026-03-10 08:26:19] 2026-03-10 07:25:07,689 | INFO     | current chi2=3.8474042289024872 (change=57.11120462213457 %)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,689 | INFO     | sum of square deviations: 7253894147.5
[2026-03-10 08:26:19] 2026-03-10 07:25:07,692 | INFO     | sum of deviations: -60971236334.5
[2026-03-10 08:26:19] 2026-03-10 07:25:07,693 | INFO     | mean x: 1773118780.5
[2026-03-10 08:26:19] 2026-03-10 07:25:07,693 | INFO     | mean y: 2510059.213286713
[2026-03-10 08:26:19] 2026-03-10 07:25:07,693 | INFO     | intersect: 14906124864.822903
[2026-03-10 08:26:19] 2026-03-10 07:25:07,693 | INFO     | chi2: 1.1599306277455204
[2026-03-10 08:26:19] 2026-03-10 07:25:07,693 | INFO     | current chi2=1.1599306277455204 (change=69.8516049072285 %)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,694 | INFO     | sum of square deviations: 6880054580.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,697 | INFO     | sum of deviations: -69814438024.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,697 | INFO     | mean x: 1773118933.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,697 | INFO     | mean y: 2513624.9003558718
[2026-03-10 08:26:19] 2026-03-10 07:25:07,697 | INFO     | intersect: 17995001971.861916
[2026-03-10 08:26:19] 2026-03-10 07:25:07,698 | INFO     | chi2: 1.0613789708686525
[2026-03-10 08:26:19] 2026-03-10 07:25:07,698 | INFO     | current chi2=1.0613789708686525 (change=8.496340601714786 %)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,698 | INFO     | left removable region: 30
[2026-03-10 08:26:19] 2026-03-10 07:25:07,699 | INFO     | sum of square deviations: 5449944045.0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,701 | INFO     | sum of deviations: -22824657370.999996
[2026-03-10 08:26:19] 2026-03-10 07:25:07,701 | INFO     | mean x: 1773119207.5
[2026-03-10 08:26:19] 2026-03-10 07:25:07,701 | INFO     | mean y: 2509863.9923076923
[2026-03-10 08:26:19] 2026-03-10 07:25:07,702 | INFO     | intersect: 7428428011.951302
[2026-03-10 08:26:19] 2026-03-10 07:25:07,702 | INFO     | chi2: 0.14626170823362283
[2026-03-10 08:26:19] 2026-03-10 07:25:07,702 | INFO     | current memory leak: -4.19 B/s (using 260 data points, chi2=0.15)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,703 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,703 | INFO     | ..............................
[2026-03-10 08:26:19] 2026-03-10 07:25:07,703 | INFO     | . Timing measurements:
[2026-03-10 08:26:19] 2026-03-10 07:25:07,703 | INFO     | . get job = 0 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,703 | INFO     | . initial setup = 109 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,704 | INFO     | . payload setup = 157 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,704 | INFO     | . stage-in = 0 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,704 | INFO     | . payload execution = 18149 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,704 | INFO     | . stage-out = 4 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,704 | INFO     | . log creation = 1 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,704 | INFO     | ..............................
[2026-03-10 08:26:19] 2026-03-10 07:25:07,937 | INFO     | 
[2026-03-10 08:26:19] 2026-03-10 07:25:07,937 | INFO     | job summary report
[2026-03-10 08:26:19] 2026-03-10 07:25:07,937 | INFO     | --------------------------------------------------
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | PanDA job id: 7047420071
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | task id: 48966988
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | errors: (none)
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | pilot state: finished 
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | transexitcode: 0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | exeerrorcode: 0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | exeerrordiag: 
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | exitcode: 0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,938 | INFO     | exitmsg: OK
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | cpuconsumptiontime: 69120 s
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | nevents: 400
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | neventsw: 0
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | pid: 22476
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | pgrp: 22476
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | corecount: 8
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | event service: False
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | sizes: {0: 2279838, 1: 2280239, 2: 2280327, 12: 2280327, 18311: 2312737, 18312: 2312736, 18316: 2321918, 18319: 2322168}
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | --------------------------------------------------
[2026-03-10 08:26:19] 2026-03-10 07:25:07,939 | INFO     | 
[2026-03-10 08:26:19] 2026-03-10 07:25:07,940 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-10 08:26:19] 2026-03-10 07:25:08,072 | INFO     | PID=18034 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 08:26:19] 2026-03-10 07:25:08,072 | INFO     | .. there are 2 such processes running
[2026-03-10 08:26:19] 2026-03-10 07:25:08,541 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,541 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,541 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,541 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 08:26:19] 2026-03-10 07:25:08,543 | INFO     | job 7047420071 has completed (purged errors)
[2026-03-10 08:26:19] 2026-03-10 07:25:08,544 | INFO     | overall cleanup function is called
[2026-03-10 08:26:19] 2026-03-10 07:25:09,553 | INFO     | --- collectZombieJob: --- 10, [22476]
[2026-03-10 08:26:19] 2026-03-10 07:25:09,553 | INFO     | zombie collector waiting for pid 22476
[2026-03-10 08:26:19] 2026-03-10 07:25:09,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 08:26:19] 2026-03-10 07:25:09,553 | INFO     | collected zombie processes
[2026-03-10 08:26:19] 2026-03-10 07:25:09,554 | INFO     | will attempt to kill all subprocesses of pid=22476
[2026-03-10 08:26:19] 2026-03-10 07:25:09,635 | INFO     | process IDs to be killed: [22476] (in reverse order)
[2026-03-10 08:26:19] 2026-03-10 07:25:10,542 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 08:26:19] 2026-03-10 07:25:10,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 08:26:19] 2026-03-10 07:25:10,544 | INFO     | did not find any defunct processes belonging to 22476
[2026-03-10 08:26:19] 2026-03-10 07:25:10,546 | INFO     | did not find any defunct processes belonging to 22476
[2026-03-10 08:26:19] 2026-03-10 07:25:10,546 | INFO     | ready for new job
[2026-03-10 08:26:19] 2026-03-10 07:25:10,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 08:26:19] 2026-03-10 07:25:10,548 | INFO     | **************************************
[2026-03-10 08:26:19] 2026-03-10 07:25:10,548 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 08:26:19] 2026-03-10 07:25:10,549 | INFO     | **************************************
[2026-03-10 08:26:19] 2026-03-10 07:25:10,549 | INFO     | 
[2026-03-10 08:26:19] 2026-03-10 07:25:10,549 | INFO     | pilot is running in a VM
[2026-03-10 08:26:19] 2026-03-10 07:25:10,549 | INFO     | architecture information:
[2026-03-10 08:26:19] 2026-03-10 07:25:10,558 | INFO     | executing command: cat /etc/os-release
[2026-03-10 08:26:19] 2026-03-10 07:25:10,870 | INFO     | cat /etc/os-release:
[2026-03-10 08:26:19] NAME="CentOS Linux"
[2026-03-10 08:26:19] VERSION="7 (Core)"
[2026-03-10 08:26:19] ID="centos"
[2026-03-10 08:26:19] ID_LIKE="rhel fedora"
[2026-03-10 08:26:19] VERSION_ID="7"
[2026-03-10 08:26:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 08:26:19] ANSI_COLOR="0;31"
[2026-03-10 08:26:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 08:26:19] HOME_URL="https://www.centos.org/"
[2026-03-10 08:26:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 08:26:19] 
[2026-03-10 08:26:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 08:26:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 08:26:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 08:26:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 08:26:19] 
[2026-03-10 08:26:19] 2026-03-10 07:25:10,871 | INFO     | **************************************
[2026-03-10 08:26:19] 2026-03-10 07:25:11,374 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-10 08:26:19] 2026-03-10 07:25:11,666 | INFO     | sufficient remaining disk space (496600350720 B)
[2026-03-10 08:26:19] 2026-03-10 07:25:11,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 08:26:19] 2026-03-10 07:25:11,666 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 08:26:19] 2026-03-10 07:25:11,666 | INFO     | update_server=False
[2026-03-10 08:26:19] 2026-03-10 07:25:11,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 08:26:19] 2026-03-10 07:25:11,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:26:19] 2026-03-10 07:25:11,667 | INFO     | aborting loop
[2026-03-10 08:26:19] 2026-03-10 07:25:11,912 | INFO     | all data control threads have been joined
[2026-03-10 08:26:19] 2026-03-10 07:25:12,510 | INFO     | all payload control threads have been joined
[2026-03-10 08:26:19] 2026-03-10 07:25:12,672 | INFO     | [job] retrieve thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:12,673 | INFO     | [job] job monitor thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:12,701 | INFO     | [payload] validate_post thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:12,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 08:26:19] 2026-03-10 07:25:12,818 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:12,839 | INFO     | all job control threads have been joined
[2026-03-10 08:26:19] 2026-03-10 07:25:12,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 08:26:19] 2026-03-10 07:25:12,886 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:12,906 | INFO     | [job] validate thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:12,918 | INFO     | [data] control thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,057 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,476 | INFO     | [data] copytool_in thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,516 | INFO     | [payload] control thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,596 | INFO     | [payload] failed_post thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 08:26:19] 2026-03-10 07:25:13,845 | INFO     | [job] control thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:13,874 | INFO     | [job] queue monitor thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:14,758 | INFO     | [data] copytool_out thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:17,619 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 08:26:19] 2026-03-10 07:25:40,204 | INFO     | PID=18034 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-10 08:26:19] 2026-03-10 07:25:40,205 | INFO     | .. there are 2 such processes running
[2026-03-10 08:26:19] 2026-03-10 07:25:40,205 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 08:26:19] 2026-03-10 07:25:40,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 08:26:19] 2026-03-10 07:25:40,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 08:26:19] 2026-03-10 07:26:07,682 | INFO     | [monitor] cgroup control has ended
[2026-03-10 08:26:19] 2026-03-10 07:26:08,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689550206784)>', '<ExcThread(monitor, started 139688945891072)>']
[2026-03-10 08:26:19] 2026-03-10 07:26:09,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 08:26:19] 2026-03-10 07:26:09,379 | INFO     | [monitor] control thread has ended
[2026-03-10 08:26:19] 2026-03-10 07:26:13,539 | INFO     | all workflow threads have been joined
[2026-03-10 08:26:19] 2026-03-10 07:26:13,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 08:26:19] 2026-03-10 07:26:13,540 | INFO     | traces error code: 0
[2026-03-10 08:26:19] 2026-03-10 07:26:13,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 08:26:19] 2026-03-10 07:26:13,985 [wrapper] ==== pilot stdout END ====
[2026-03-10 08:26:19] 2026-03-10 07:26:14,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 08:26:19] 2026-03-10 07:26:14,182 [wrapper] pilotpid: 18034
[2026-03-10 08:26:19] 2026-03-10 07:26:14,287 [wrapper] Pilot exit status: 0
[2026-03-10 08:26:19] 2026-03-10 07:26:14,743 [wrapper] pandaids: 7047420071
[2026-03-10 08:26:19] 2026-03-10 07:26:15,716 [wrapper] cleanup supervisor_pilot 28994 18035
[2026-03-10 08:26:19] 2026-03-10 07:26:15,782 [wrapper] Test setup, not cleaning
[2026-03-10 08:26:19] 2026-03-10 07:26:15,883 [wrapper] apfmon messages muted
[2026-03-10 08:26:19] 2026-03-10 07:26:15,986 [wrapper] ==== wrapper stdout END ====
[2026-03-10 08:26:19] 2026-03-10 07:26:16,094 [wrapper] ==== wrapper stderr END ====
[2026-03-10 08:26:19]  *** Error codes and diagnostics ***
[2026-03-10 08:26:19]     "exeErrorCode": 0,
[2026-03-10 08:26:19]     "exeErrorDiag": "",
[2026-03-10 08:26:19]     "pilotErrorCode": 0,
[2026-03-10 08:26:19]     "pilotErrorDiag": "",
[2026-03-10 08:26:19]  *** Listing of results directory ***
[2026-03-10 08:26:19] total 412664
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-10 08:26:19] -rwx------. 1 boinc boinc     36322 Mar  9 16:41 runpilot2-wrapper.sh
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc      5111 Mar  9 16:41 queuedata.json
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc       100 Mar 10 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 08:26:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 03:13 run_atlas
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc       105 Mar 10 03:13 job.xml
[2026-03-10 08:26:19] -rw-r--r--. 2 boinc boinc 210638816 Mar 10 03:13 EVNT.48966985._000965.pool.root.1
[2026-03-10 08:26:19] drwxrwx--x. 2 boinc boinc        68 Mar 10 03:13 shared
[2026-03-10 08:26:19] -rw-r--r--. 2 boinc boinc    597974 Mar 10 03:13 input.tar.gz
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc      6391 Mar 10 03:13 init_data.xml
[2026-03-10 08:26:19] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:13 start_atlas.sh
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc         0 Mar 10 03:13 boinc_lockfile
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc      2592 Mar 10 03:13 pandaJob.out
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc       415 Mar 10 03:19 workernode_map.json
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc   1002338 Mar 10 03:19 agis_schedconf.cvmfs.json
[2026-03-10 08:26:19] drwx------. 5 boinc boinc      4096 Mar 10 03:19 pilot3
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc 201817897 Mar 10 08:23 HITS.48966988._024785.pool.root.1
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc       530 Mar 10 08:24 boinc_task_state.xml
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc        95 Mar 10 08:24 pilot_heartbeat.json
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc      1013 Mar 10 08:24 memory_monitor_summary.json
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc   1511578 Mar 10 08:25 agis_ddmendpoints.agis.ALL.json
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc    534760 Mar 10 08:25 log.48966988._024785.job.log.tgz.1
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc      6316 Mar 10 08:25 heartbeat.json
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc      8192 Mar 10 08:26 boinc_mmap_file
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc        28 Mar 10 08:26 wrapper_checkpoint.txt
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc      4880 Mar 10 08:26 pilotlog.txt
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc   2565404 Mar 10 08:26 log.48966988._024785.job.log.1
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc       357 Mar 10 08:26 output.list
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc       620 Mar 10 08:26 runtime_log
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc   3112960 Mar 10 08:26 result.tar.gz
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc      8816 Mar 10 08:26 runtime_log.err
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc       656 Mar 10 08:26 KSbMDmMurJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5BaLDmHiZsNm.diag
[2026-03-10 08:26:19] -rw-r--r--. 1 boinc boinc     20817 Mar 10 08:26 stderr.txt
[2026-03-10 08:26:19] HITS file was successfully produced:
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc 201817897 Mar 10 08:23 shared/HITS.pool.root.1
[2026-03-10 08:26:19]  *** Contents of shared directory: ***
[2026-03-10 08:26:19] total 406432
[2026-03-10 08:26:19] -rw-r--r--. 2 boinc boinc 210638816 Mar 10 03:13 ATLAS.root_0
[2026-03-10 08:26:19] -rw-r--r--. 2 boinc boinc    597974 Mar 10 03:13 input.tar.gz
[2026-03-10 08:26:19] -rw-r--r--. 2 boinc boinc     15845 Mar 10 03:13 start_atlas.sh
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc 201817897 Mar 10 08:23 HITS.pool.root.1
[2026-03-10 08:26:19] -rw-------. 1 boinc boinc   3112960 Mar 10 08:26 result.tar.gz
08:26:20 (14024): run_atlas exited; CPU time 69315.187836
08:26:20 (14024): called boinc_finish(0)

</stderr_txt>
]]>

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