Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:51:02 (2900509): wrapper (7.7.26015): starting
21:51:02 (2900509): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 21:51:02] Arguments: --nthreads 4
[2026-03-09 21:51:02] Threads: 4
[2026-03-09 21:51:02] Checking for CVMFS
[2026-03-09 21:51:02] No cvmfs_config command found, will try listing directly
[2026-03-09 21:51:02] CVMFS is ok
[2026-03-09 21:51:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 21:51:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 21:51:02] Further information can be found at the LHC@home message board.
[2026-03-09 21:51:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 21:51:02] Checking for apptainer binary...
[2026-03-09 21:51:02] which: no apptainer in ((null))
[2026-03-09 21:51:02] apptainer is not installed, using version from CVMFS
[2026-03-09 21:51:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 21:51:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-09 21:51:02] apptainer works
[2026-03-09 21:51:02] Set ATHENA_PROC_NUMBER=4
[2026-03-09 21:51:02] Set ATHENA_CORE_NUMBER=4
[2026-03-09 21:51:02] Starting ATLAS job with PandaID=7047405971
[2026-03-09 21:51:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 23:38:46]  *** The last 200 lines of the pilot log: ***
[2026-03-09 23:38:46] 2026-03-09 22:37:58,418 | INFO     | job 7047405971 has finished - writing final server update
[2026-03-09 23:38:46] 2026-03-09 22:37:58,418 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_590299/.job.ad'
[2026-03-09 23:38:46] 2026-03-09 22:37:58,418 | INFO     | total number of processed events: 400 (read)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,436 | INFO     | using path: /var/lib/boinc/var/slot28/slots/9/PanDA_Pilot-7047405971/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,437 | INFO     | extracted standard info from prmon json
[2026-03-09 23:38:46] 2026-03-09 22:37:58,437 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 23:38:46] 2026-03-09 22:37:58,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 23:38:46] 2026-03-09 22:37:58,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 23:38:46] 2026-03-09 22:37:58,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | fitting pss+swap vs Time
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | sum of square deviations: 358927660.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | sum of deviations: 4524295397.000001
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | mean x: 1773092696.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | mean y: 2277222.8
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | intersect: -22347616688.87881
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | chi2: 1.9128009531397718
[2026-03-09 23:38:46] 2026-03-09 22:37:58,439 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | sum of deviations: 10617144214.499998
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | mean x: 1773092543.5
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | mean y: 2295442.33
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | intersect: -60713840906.57211
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | chi2: 1.0958433249596575
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | current chi2=1.0958433249596575 (change=42.710017832180455 %)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | sum of deviations: 10017779717.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | mean x: 1773092391.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | mean y: 2293373.7684210525
[2026-03-09 23:38:46] 2026-03-09 22:37:58,440 | INFO     | intersect: -66816976809.59071
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | chi2: 1.0975982882833877
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | current chi2=1.0975982882833877 (change=-0.16014728417447444 %)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | right removable region: 94
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | sum of deviations: -5574292118.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | mean x: 1773092848.5
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | mean y: 2307809.62
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | intersect: 31879951332.776024
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | chi2: 0.8492066607426031
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | current chi2=0.8492066607426031 (change=55.60402354731836 %)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,441 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | sum of deviations: -5580351675.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | mean x: 1773093001.0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | mean y: 2307821.5789473685
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | intersect: 37223644794.88595
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | chi2: 0.850225952485237
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | current chi2=0.850225952485237 (change=-0.12002870323021197 %)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | left removable region: 20
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | sum of square deviations: 125630262.5
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | sum of deviations: 277952813.49999994
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | mean x: 1773092970.5
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | mean y: 2329587.743243243
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | intersect: -3920580147.063268
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | chi2: 5.879650896672636e-05
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | current memory leak: 2.21 B/s (using 74 data points, chi2=0.00)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,442 | INFO     | could have reported an average CPU frequency of 3565 MHz (7 samples)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | ..............................
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . Timing measurements:
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . get job = 0 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . initial setup = 8 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . payload setup = 9 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . stage-in = 0 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . payload execution = 6364 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . stage-out = 0 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | . log creation = 0 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,443 | INFO     | ..............................
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | 
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | job summary report
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | --------------------------------------------------
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | PanDA job id: 7047405971
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | task id: 48966988
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | errors: (none)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,879 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | pilot state: finished 
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | transexitcode: 0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | exeerrorcode: 0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | exeerrordiag: 
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | exitcode: 0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | exitmsg: OK
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | cpuconsumptiontime: 24211 s
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | nevents: 400
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | neventsw: 0
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | pid: 2922983
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | pgrp: 2922983
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | corecount: 4
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | event service: False
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | sizes: {0: 2280282, 11: 2280282, 6377: 2307395, 6378: 2316609}
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | --------------------------------------------------
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | 
[2026-03-09 23:38:46] 2026-03-09 22:37:58,880 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/9
[2026-03-09 23:38:46] 2026-03-09 22:37:58,898 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | job 7047405971 has completed (purged errors)
[2026-03-09 23:38:46] 2026-03-09 22:37:58,899 | INFO     | overall cleanup function is called
[2026-03-09 23:38:46] 2026-03-09 22:37:59,905 | INFO     | --- collectZombieJob: --- 10, [2922983]
[2026-03-09 23:38:46] 2026-03-09 22:37:59,905 | INFO     | zombie collector waiting for pid 2922983
[2026-03-09 23:38:46] 2026-03-09 22:37:59,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 23:38:46] 2026-03-09 22:37:59,905 | INFO     | collected zombie processes
[2026-03-09 23:38:46] 2026-03-09 22:37:59,905 | INFO     | will attempt to kill all subprocesses of pid=2922983
[2026-03-09 23:38:46] 2026-03-09 22:38:00,341 | INFO     | process IDs to be killed: [2922983] (in reverse order)
[2026-03-09 23:38:46] 2026-03-09 22:38:00,542 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 23:38:46] 2026-03-09 22:38:00,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 23:38:46] 2026-03-09 22:38:00,569 | INFO     | did not find any defunct processes belonging to 2922983
[2026-03-09 23:38:46] 2026-03-09 22:38:00,592 | INFO     | did not find any defunct processes belonging to 2922983
[2026-03-09 23:38:46] 2026-03-09 22:38:00,592 | INFO     | ready for new job
[2026-03-09 23:38:46] 2026-03-09 22:38:00,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 23:38:46] 2026-03-09 22:38:00,594 | INFO     | **************************************
[2026-03-09 23:38:46] 2026-03-09 22:38:00,594 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 23:38:46] 2026-03-09 22:38:00,594 | INFO     | **************************************
[2026-03-09 23:38:46] 2026-03-09 22:38:00,594 | INFO     | 
[2026-03-09 23:38:46] 2026-03-09 22:38:00,599 | INFO     | architecture information:
[2026-03-09 23:38:46] 2026-03-09 22:38:00,600 | INFO     | executing command: cat /etc/os-release
[2026-03-09 23:38:46] 2026-03-09 22:38:00,613 | INFO     | cat /etc/os-release:
[2026-03-09 23:38:46] NAME="CentOS Linux"
[2026-03-09 23:38:46] VERSION="7 (Core)"
[2026-03-09 23:38:46] ID="centos"
[2026-03-09 23:38:46] ID_LIKE="rhel fedora"
[2026-03-09 23:38:46] VERSION_ID="7"
[2026-03-09 23:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 23:38:46] ANSI_COLOR="0;31"
[2026-03-09 23:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 23:38:46] HOME_URL="https://www.centos.org/"
[2026-03-09 23:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 23:38:46] 
[2026-03-09 23:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 23:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 23:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 23:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 23:38:46] 
[2026-03-09 23:38:46] 2026-03-09 22:38:00,613 | INFO     | **************************************
[2026-03-09 23:38:46] 2026-03-09 22:38:01,116 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/9
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | INFO     | sufficient remaining disk space (19987955712 B)
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | INFO     | update_server=False
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:38:46] 2026-03-09 22:38:01,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 23:38:46] 2026-03-09 22:38:01,132 | INFO     | aborting loop
[2026-03-09 23:38:46] 2026-03-09 22:38:01,225 | INFO     | all data control threads have been joined
[2026-03-09 23:38:46] 2026-03-09 22:38:02,135 | INFO     | all payload control threads have been joined
[2026-03-09 23:38:46] 2026-03-09 22:38:02,136 | INFO     | [job] retrieve thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:02,137 | INFO     | [job] job monitor thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:02,230 | INFO     | [data] control thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:02,339 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:02,398 | INFO     | all job control threads have been joined
[2026-03-09 23:38:46] 2026-03-09 22:38:02,499 | INFO     | job.realtimelogging is not enabled
[2026-03-09 23:38:46] 2026-03-09 22:38:02,990 | INFO     | [payload] failed_post thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,126 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,137 | INFO     | [data] copytool_out thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,140 | INFO     | [payload] control thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,156 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,197 | INFO     | [payload] validate_post thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,251 | INFO     | [job] validate thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,400 | INFO     | [job] control thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 23:38:46] 2026-03-09 22:38:03,503 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:03,526 | INFO     | [data] copytool_in thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:04,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 23:38:46] 2026-03-09 22:38:04,505 | INFO     | [job] queue monitor thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:08,426 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 23:38:46] 2026-03-09 22:38:30,766 | INFO     | PID=2908769 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 23:38:46] 2026-03-09 22:38:30,766 | INFO     | .. there are 60 such processes running
[2026-03-09 23:38:46] 2026-03-09 22:38:30,766 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 23:38:46] 2026-03-09 22:38:30,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 23:38:46] 2026-03-09 22:38:30,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 23:38:46] 2026-03-09 22:38:39,174 | INFO     | [monitor] cgroup control has ended
[2026-03-09 23:38:46] 2026-03-09 22:38:41,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23020341593920)>', '<ExcThread(monitor, started 23020103284480)>']
[2026-03-09 23:38:46] 2026-03-09 22:38:41,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 23:38:46] 2026-03-09 22:38:41,820 | INFO     | [monitor] control thread has ended
[2026-03-09 23:38:46] 2026-03-09 22:38:46,291 | INFO     | all workflow threads have been joined
[2026-03-09 23:38:46] 2026-03-09 22:38:46,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 23:38:46] 2026-03-09 22:38:46,291 | INFO     | traces error code: 0
[2026-03-09 23:38:46] 2026-03-09 22:38:46,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 23:38:46] 2026-03-09 22:38:46,398 [wrapper] ==== pilot stdout END ====
[2026-03-09 23:38:46] 2026-03-09 22:38:46,401 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 23:38:46] 2026-03-09 22:38:46,404 [wrapper] pilotpid: 2908769
[2026-03-09 23:38:46] 2026-03-09 22:38:46,406 [wrapper] Pilot exit status: 0
[2026-03-09 23:38:46] 2026-03-09 22:38:46,413 [wrapper] pandaids: 7047405971
[2026-03-09 23:38:46] 2026-03-09 22:38:46,525 [wrapper] cleanup supervisor_pilot 4089622 2908770
[2026-03-09 23:38:46] 2026-03-09 22:38:46,527 [wrapper] Test setup, not cleaning
[2026-03-09 23:38:46] 2026-03-09 22:38:46,530 [wrapper] apfmon messages muted
[2026-03-09 23:38:46] 2026-03-09 22:38:46,532 [wrapper] ==== wrapper stdout END ====
[2026-03-09 23:38:46] 2026-03-09 22:38:46,534 [wrapper] ==== wrapper stderr END ====
[2026-03-09 23:38:46]  *** Error codes and diagnostics ***
[2026-03-09 23:38:46]     "exeErrorCode": 0,
[2026-03-09 23:38:46]     "exeErrorDiag": "",
[2026-03-09 23:38:46]     "pilotErrorCode": 0,
[2026-03-09 23:38:46]     "pilotErrorDiag": "",
[2026-03-09 23:38:46]  *** Listing of results directory ***
[2026-03-09 23:38:46] total 414664
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc      5111 Mar  9 15:53 queuedata.json
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc    584627 Mar  9 15:53 pilot3.tar.gz
[2026-03-09 23:38:46] -rwx------. 1 boinc boinc     36322 Mar  9 15:54 runpilot2-wrapper.sh
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc       100 Mar  9 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 23:38:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 21:50 run_atlas
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc       105 Mar  9 21:50 job.xml
[2026-03-09 23:38:46] -rw-r--r--. 2 boinc boinc 213160811 Mar  9 21:51 EVNT.48966985._000958.pool.root.1
[2026-03-09 23:38:46] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:51 start_atlas.sh
[2026-03-09 23:38:46] drwxrwx--x. 2 boinc boinc      4096 Mar  9 21:51 shared
[2026-03-09 23:38:46] -rw-r--r--. 2 boinc boinc    597971 Mar  9 21:51 input.tar.gz
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc      6702 Mar  9 21:51 init_data.xml
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc         0 Mar  9 21:51 boinc_lockfile
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc      2592 Mar  9 21:51 pandaJob.out
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc   1002738 Mar  9 21:51 agis_schedconf.cvmfs.json
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc   1511578 Mar  9 21:51 agis_ddmendpoints.agis.ALL.json
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc       444 Mar  9 21:51 workernode_map.json
[2026-03-09 23:38:46] drwx------. 5 boinc boinc      4096 Mar  9 21:51 pilot3
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc       530 Mar  9 23:37 boinc_task_state.xml
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc 205099272 Mar  9 23:37 HITS.48966988._024591.pool.root.1
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc      1034 Mar  9 23:37 memory_monitor_summary.json
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc    290252 Mar  9 23:37 log.48966988._024591.job.log.tgz.1
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc      6355 Mar  9 23:37 heartbeat.json
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc      8192 Mar  9 23:38 boinc_mmap_file
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc        27 Mar  9 23:38 wrapper_checkpoint.txt
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc        95 Mar  9 23:38 pilot_heartbeat.json
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc      4901 Mar  9 23:38 pilotlog.txt
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc    921262 Mar  9 23:38 log.48966988._024591.job.log.1
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc       357 Mar  9 23:38 output.list
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc       620 Mar  9 23:38 runtime_log
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc   1228800 Mar  9 23:38 result.tar.gz
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc      9204 Mar  9 23:38 runtime_log.err
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc       663 Mar  9 23:38 a5QNDmqArJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSncLDmeW9BQn.diag
[2026-03-09 23:38:46] -rw-r--r--. 1 boinc boinc     20813 Mar  9 23:38 stderr.txt
[2026-03-09 23:38:46] HITS file was successfully produced:
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc 205099272 Mar  9 23:37 shared/HITS.pool.root.1
[2026-03-09 23:38:46]  *** Contents of shared directory: ***
[2026-03-09 23:38:46] total 410272
[2026-03-09 23:38:46] -rw-r--r--. 2 boinc boinc 213160811 Mar  9 21:51 ATLAS.root_0
[2026-03-09 23:38:46] -rw-r--r--. 2 boinc boinc     15845 Mar  9 21:51 start_atlas.sh
[2026-03-09 23:38:46] -rw-r--r--. 2 boinc boinc    597971 Mar  9 21:51 input.tar.gz
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc 205099272 Mar  9 23:37 HITS.pool.root.1
[2026-03-09 23:38:46] -rw-------. 1 boinc boinc   1228800 Mar  9 23:38 result.tar.gz
23:38:48 (2900509): run_atlas exited; CPU time 24478.429392
23:38:48 (2900509): called boinc_finish(0)

</stderr_txt>
]]>

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