Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:12 (1705887): wrapper (7.7.26015): starting
04:56:12 (1705887): wrapper: running run_atlas (--nthreads 12)
[2026-03-10 04:56:12] Arguments: --nthreads 12
[2026-03-10 04:56:12] Threads: 12
[2026-03-10 04:56:12] Checking for CVMFS
[2026-03-10 04:56:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 04:56:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 04:56:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 04:56:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 04:56:14] 2.13.3.0 3760440 19935 277460 157100 1 377 40860373 46080000 20532 130560 0 62699605 99.885 20884107 30247 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-10 04:56:14] CVMFS is ok
[2026-03-10 04:56:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 04:56:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 04:56:14] Further information can be found at the LHC@home message board.
[2026-03-10 04:56:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 04:56:14] Checking for apptainer binary...
[2026-03-10 04:56:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 04:56:14] Running /usr/bin/apptainer --version
[2026-03-10 04:56:14] apptainer version 1.4.5-2.el9
[2026-03-10 04:56:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 04:56:56] mff2104.farm.particle.cz
[2026-03-10 04:56:56] apptainer works
[2026-03-10 04:56:56] Set ATHENA_PROC_NUMBER=12
[2026-03-10 04:56:56] Set ATHENA_CORE_NUMBER=12
[2026-03-10 04:56:56] Starting ATLAS job with PandaID=7035864171
[2026-03-10 04:56:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 07:04:06]  *** The last 200 lines of the pilot log: ***
[2026-03-10 07:04:06]  is_altstaged=None
[2026-03-10 07:04:06]  is_tar=False
[2026-03-10 07:04:06]  lfn=log.48838521._002379.job.log.tgz.1
[2026-03-10 07:04:06]  mtime=0
[2026-03-10 07:04:06]  protocol_id=None
[2026-03-10 07:04:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 07:04:06]  replicas=None
[2026-03-10 07:04:06]  scope=mc23_13p6TeV
[2026-03-10 07:04:06]  status=None
[2026-03-10 07:04:06]  status_code=0
[2026-03-10 07:04:06]  storage_token=
[2026-03-10 07:04:06]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-7035864171/log.48838521._002379.job.log.tgz.1
[2026-03-10 07:04:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/22/log.48838521._002379.job.log.tgz.1
[2026-03-10 07:04:06]  workdir=None
[2026-03-10 07:04:06] ]
[2026-03-10 07:04:06] 2026-03-10 05:40:19,708 | INFO     | transferring file log.48838521._002379.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-7035864171/log.48838521._002379.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-10 07:04:06] 2026-03-10 05:40:19,709 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-7035864171/log.48838521._002379.job.log.tgz.1 /scratch/.boinc/slots/0/log.48838521._002379.j
[2026-03-10 07:04:06] 2026-03-10 05:40:19,943 | INFO     | adding to output.list: log.48838521._002379.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/22/log.48838521._002379.job.log.tg
[2026-03-10 07:04:06] 2026-03-10 05:40:19,944 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 07:04:06] 2026-03-10 05:40:19,944 | INFO     | summary of transferred files:
[2026-03-10 07:04:06] 2026-03-10 05:40:19,944 | INFO     |  -- lfn=log.48838521._002379.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 07:04:06] 2026-03-10 05:40:19,945 | INFO     | stage-out finished correctly
[2026-03-10 07:04:06] 2026-03-10 05:40:20,111 | INFO     | monitor loop #435: job 0:7035864171 is in state 'finished'
[2026-03-10 07:04:06] 2026-03-10 05:40:20,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 07:04:06] 2026-03-10 05:40:21,560 | INFO     | time since job start (6080s) is within the limit (349056.0s)
[2026-03-10 07:04:06] 2026-03-10 05:40:22,616 | INFO     | monitor loop #436: job 0:7035864171 is in state 'finished'
[2026-03-10 07:04:06] 2026-03-10 05:40:22,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-10 07:04:06] 2026-03-10 05:40:22,682 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 07:04:06] 2026-03-10 05:40:23,567 | INFO     | time since job start (6082s) is within the limit (349056.0s)
[2026-03-10 07:04:06] 2026-03-10 05:40:24,967 | INFO     | job 7035864171 has state=finished
[2026-03-10 07:04:06] 2026-03-10 05:40:24,967 | INFO     | preparing for final server update for job 7035864171 in state='finished'
[2026-03-10 07:04:06] 2026-03-10 05:40:24,968 | INFO     | reading metadata from: /scratch/.boinc/slots/0/PanDA_Pilot-7035864171/jobReport.json
[2026-03-10 07:04:06] 2026-03-10 05:40:24,970 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/0/workernode_map.json
[2026-03-10 07:04:06] 2026-03-10 05:40:24,970 | INFO     | this job has now completed (state=finished)
[2026-03-10 07:04:06] 2026-03-10 05:40:24,970 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 07:04:06] 2026-03-10 05:40:24,970 | INFO     | log transfer has been attempted: DONE
[2026-03-10 07:04:06] 2026-03-10 05:40:24,971 | INFO     | job 7035864171 has finished - writing final server update
[2026-03-10 07:04:06] 2026-03-10 05:40:24,971 | INFO     | total number of processed events: 400 (read)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,009 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-7035864171/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,010 | INFO     | extracted standard info from prmon json
[2026-03-10 07:04:06] 2026-03-10 05:40:25,010 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 07:04:06] 2026-03-10 05:40:25,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 07:04:06] 2026-03-10 05:40:25,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 07:04:06] 2026-03-10 05:40:25,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 07:04:06] 2026-03-10 05:40:25,016 | INFO     | fitting pss+swap vs Time
[2026-03-10 07:04:06] 2026-03-10 05:40:25,016 | INFO     | sum of square deviations: 233641590.0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,017 | INFO     | sum of deviations: 5017943082.000001
[2026-03-10 07:04:06] 2026-03-10 05:40:25,017 | INFO     | mean x: 1773118290.0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,017 | INFO     | mean y: 2706857.6703296704
[2026-03-10 07:04:06] 2026-03-10 05:40:25,017 | INFO     | intersect: -38078726575.791466
[2026-03-10 07:04:06] 2026-03-10 05:40:25,017 | INFO     | chi2: 0.08345364003574189
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | current memory leak: 21.48 B/s (using 91 data points, chi2=0.08)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | could have reported an average CPU frequency of 2699 MHz (7 samples)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | ..............................
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | . Timing measurements:
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | . get job = 0 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | . initial setup = 43 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | . payload setup = 46 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,018 | INFO     | . stage-in = 0 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,019 | INFO     | . payload execution = 6013 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,019 | INFO     | . stage-out = 1 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,019 | INFO     | . log creation = 0 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,019 | INFO     | ..............................
[2026-03-10 07:04:06] 2026-03-10 05:40:25,507 | INFO     | 
[2026-03-10 07:04:06] 2026-03-10 05:40:25,507 | INFO     | job summary report
[2026-03-10 07:04:06] 2026-03-10 05:40:25,507 | INFO     | --------------------------------------------------
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | PanDA job id: 7035864171
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | task id: 48838521
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | errors: (none)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | pilot state: finished 
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | transexitcode: 0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | exeerrorcode: 0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | exeerrordiag: 
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | exitcode: 0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | exitmsg: OK
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | cpuconsumptiontime: 45545 s
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | nevents: 400
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | neventsw: 0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | pid: 1750788
[2026-03-10 07:04:06] 2026-03-10 05:40:25,508 | INFO     | pgrp: 1750788
[2026-03-10 07:04:06] 2026-03-10 05:40:25,509 | INFO     | corecount: 12
[2026-03-10 07:04:06] 2026-03-10 05:40:25,509 | INFO     | event service: False
[2026-03-10 07:04:06] 2026-03-10 05:40:25,509 | INFO     | sizes: {0: 2279747, 1: 2280204, 2: 2280292, 12: 2280292, 6064: 2307348, 6066: 2316348, 6069: 2316532, 6072: 2316726}
[2026-03-10 07:04:06] 2026-03-10 05:40:25,509 | INFO     | --------------------------------------------------
[2026-03-10 07:04:06] 2026-03-10 05:40:25,509 | INFO     | 
[2026-03-10 07:04:06] 2026-03-10 05:40:25,509 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2026-03-10 07:04:06] 2026-03-10 05:40:25,574 | INFO     | time since job start (6084s) is within the limit (349056.0s)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | job 7035864171 has completed (purged errors)
[2026-03-10 07:04:06] 2026-03-10 05:40:25,797 | INFO     | overall cleanup function is called
[2026-03-10 07:04:06] 2026-03-10 05:40:26,807 | INFO     | --- collectZombieJob: --- 10, [1750788]
[2026-03-10 07:04:06] 2026-03-10 05:40:26,807 | INFO     | zombie collector waiting for pid 1750788
[2026-03-10 07:04:06] 2026-03-10 05:40:26,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 07:04:06] 2026-03-10 05:40:26,808 | INFO     | collected zombie processes
[2026-03-10 07:04:06] 2026-03-10 05:40:26,808 | INFO     | will attempt to kill all subprocesses of pid=1750788
[2026-03-10 07:04:06] 2026-03-10 05:40:27,422 | INFO     | process IDs to be killed: [1750788] (in reverse order)
[2026-03-10 07:04:06] 2026-03-10 05:40:27,898 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 07:04:06] 2026-03-10 05:40:27,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 07:04:06] 2026-03-10 05:40:27,919 | INFO     | did not find any defunct processes belonging to 1750788
[2026-03-10 07:04:06] 2026-03-10 05:40:27,944 | INFO     | did not find any defunct processes belonging to 1750788
[2026-03-10 07:04:06] 2026-03-10 05:40:27,944 | INFO     | ready for new job
[2026-03-10 07:04:06] 2026-03-10 05:40:27,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 07:04:06] 2026-03-10 05:40:27,946 | INFO     | **************************************
[2026-03-10 07:04:06] 2026-03-10 05:40:27,946 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 07:04:06] 2026-03-10 05:40:27,946 | INFO     | **************************************
[2026-03-10 07:04:06] 2026-03-10 05:40:27,946 | INFO     | 
[2026-03-10 07:04:06] 2026-03-10 05:40:27,957 | INFO     | architecture information:
[2026-03-10 07:04:06] 2026-03-10 05:40:27,957 | INFO     | executing command: cat /etc/os-release
[2026-03-10 07:04:06] 2026-03-10 05:40:28,100 | INFO     | cat /etc/os-release:
[2026-03-10 07:04:06] NAME="CentOS Linux"
[2026-03-10 07:04:06] VERSION="7 (Core)"
[2026-03-10 07:04:06] ID="centos"
[2026-03-10 07:04:06] ID_LIKE="rhel fedora"
[2026-03-10 07:04:06] VERSION_ID="7"
[2026-03-10 07:04:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 07:04:06] ANSI_COLOR="0;31"
[2026-03-10 07:04:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 07:04:06] HOME_URL="https://www.centos.org/"
[2026-03-10 07:04:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 07:04:06] 
[2026-03-10 07:04:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 07:04:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 07:04:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 07:04:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 07:04:06] 
[2026-03-10 07:04:06] 2026-03-10 05:40:28,100 | INFO     | **************************************
[2026-03-10 07:04:06] 2026-03-10 05:40:28,603 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-03-10 07:04:06] 2026-03-10 05:40:28,778 | INFO     | sufficient remaining disk space (1464013422592 B)
[2026-03-10 07:04:06] 2026-03-10 05:40:28,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 07:04:06] 2026-03-10 05:40:28,779 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 07:04:06] 2026-03-10 05:40:28,779 | INFO     | update_server=False
[2026-03-10 07:04:06] 2026-03-10 05:40:28,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 07:04:06] 2026-03-10 05:40:28,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 07:04:06] 2026-03-10 05:40:28,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:04:06] 2026-03-10 05:40:28,780 | INFO     | aborting loop
[2026-03-10 07:04:06] 2026-03-10 05:40:28,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 07:04:06] 2026-03-10 05:40:29,489 | INFO     | all data control threads have been joined
[2026-03-10 07:04:06] 2026-03-10 05:40:29,786 | INFO     | [job] retrieve thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:29,787 | INFO     | [job] job monitor thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:29,824 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:30,108 | INFO     | all payload control threads have been joined
[2026-03-10 07:04:06] 2026-03-10 05:40:30,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 07:04:06] 2026-03-10 05:40:30,356 | INFO     | [payload] validate_post thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:30,423 | INFO     | [payload] failed_post thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:30,432 | INFO     | all job control threads have been joined
[2026-03-10 07:04:06] 2026-03-10 05:40:30,495 | INFO     | [data] control thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:30,786 | INFO     | [data] copytool_out thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:30,809 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:30,896 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:31,114 | INFO     | [payload] control thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:31,239 | INFO     | [job] validate thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:31,249 | INFO     | [job] queue monitor thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:31,280 | INFO     | [data] copytool_in thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:31,438 | INFO     | [job] control thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:32,883 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:39,719 | INFO     | job.realtimelogging is not enabled
[2026-03-10 07:04:06] 2026-03-10 05:40:40,725 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 07:04:06] 2026-03-10 05:40:59,441 | INFO     | PID=1726990 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 07:04:06] 2026-03-10 05:40:59,441 | INFO     | .. there are 19 such processes running
[2026-03-10 07:04:06] 2026-03-10 05:40:59,441 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 07:04:06] 2026-03-10 05:40:59,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 07:04:06] 2026-03-10 05:40:59,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 07:04:06] 2026-03-10 05:41:11,423 | INFO     | [monitor] cgroup control has ended
[2026-03-10 07:04:06] 2026-03-10 05:41:12,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914997139264)>', '<ExcThread(monitor, started 139914633000704)>']
[2026-03-10 07:04:06] 2026-03-10 05:41:12,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 07:04:06] 2026-03-10 05:41:12,520 | INFO     | [monitor] control thread has ended
[2026-03-10 07:04:06] 2026-03-10 05:41:17,456 | INFO     | all workflow threads have been joined
[2026-03-10 07:04:06] 2026-03-10 05:41:17,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 07:04:06] 2026-03-10 05:41:17,457 | INFO     | traces error code: 0
[2026-03-10 07:04:06] 2026-03-10 05:41:17,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 07:04:06] 2026-03-10 05:41:17,735 [wrapper] ==== pilot stdout END ====
[2026-03-10 07:04:06] 2026-03-10 05:41:17,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 07:04:06] 2026-03-10 05:41:17,826 [wrapper] pilotpid: 1726990
[2026-03-10 07:04:06] 2026-03-10 05:41:17,866 [wrapper] Pilot exit status: 0
[2026-03-10 07:04:06] 2026-03-10 05:41:18,057 [wrapper] pandaids: 7035864171
[2026-03-10 07:04:06] 2026-03-10 05:41:18,549 [wrapper] cleanup supervisor_pilot 1952442 1726991
[2026-03-10 07:04:06] 2026-03-10 05:41:18,582 [wrapper] Test setup, not cleaning
[2026-03-10 07:04:06] 2026-03-10 05:41:18,617 [wrapper] apfmon messages muted
[2026-03-10 07:04:06] 2026-03-10 05:41:18,639 [wrapper] ==== wrapper stdout END ====
[2026-03-10 07:04:06] 2026-03-10 05:41:18,678 [wrapper] ==== wrapper stderr END ====
[2026-03-10 07:04:06]  *** Error codes and diagnostics ***
[2026-03-10 07:04:06]     "exeErrorCode": 0,
[2026-03-10 07:04:06]     "exeErrorDiag": "",
[2026-03-10 07:04:06]     "pilotErrorCode": 0,
[2026-03-10 07:04:06]     "pilotErrorDiag": "",
[2026-03-10 07:04:06]  *** Listing of results directory ***
[2026-03-10 07:04:06] total 470244
[2026-03-10 07:04:06] -rwx------ 1 boinc boinc     36322 Mar  2 08:36 runpilot2-wrapper.sh
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc      5111 Mar  2 08:38 queuedata.json
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc    584627 Mar  2 08:38 pilot3.tar.gz
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc       100 Mar 10 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 07:04:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 04:56 run_atlas
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc       105 Mar 10 04:56 job.xml
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc      6677 Mar 10 04:56 init_data.xml
[2026-03-10 07:04:06] -rw-r--r-- 2 boinc boinc 272234660 Mar 10 04:56 EVNT.48343683._000100.pool.root.1
[2026-03-10 07:04:06] -rw-r--r-- 2 boinc boinc     15845 Mar 10 04:56 start_atlas.sh
[2026-03-10 07:04:06] drwxrwx--x 2 boinc boinc      4096 Mar 10 04:56 shared
[2026-03-10 07:04:06] -rw-r--r-- 2 boinc boinc    597968 Mar 10 04:56 input.tar.gz
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc         0 Mar 10 04:56 boinc_lockfile
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc      2563 Mar 10 04:56 pandaJob.out
[2026-03-10 07:04:06] -rw------- 1 boinc boinc   1006495 Mar 10 04:58 agis_schedconf.cvmfs.json
[2026-03-10 07:04:06] -rw------- 1 boinc boinc   1511578 Mar 10 04:58 agis_ddmendpoints.agis.ALL.json
[2026-03-10 07:04:06] -rw------- 1 boinc boinc       436 Mar 10 04:58 workernode_map.json
[2026-03-10 07:04:06] drwx------ 5 boinc boinc      4096 Mar 10 04:59 pilot3
[2026-03-10 07:04:06] -rw------- 1 boinc boinc 202817027 Mar 10 06:39 HITS.48838521._002379.pool.root.1
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc       528 Mar 10 06:39 boinc_task_state.xml
[2026-03-10 07:04:06] -rw------- 1 boinc boinc        95 Mar 10 06:39 pilot_heartbeat.json
[2026-03-10 07:04:06] -rw------- 1 boinc boinc      1015 Mar 10 06:40 memory_monitor_summary.json
[2026-03-10 07:04:06] -rw------- 1 boinc boinc    407656 Mar 10 06:40 log.48838521._002379.job.log.tgz.1
[2026-03-10 07:04:06] -rw------- 1 boinc boinc      6329 Mar 10 06:40 heartbeat.json
[2026-03-10 07:04:06] -rw------- 1 boinc boinc      4895 Mar 10 06:41 pilotlog.txt
[2026-03-10 07:04:06] -rw------- 1 boinc boinc    861261 Mar 10 06:41 log.48838521._002379.job.log.1
[2026-03-10 07:04:06] -rw------- 1 boinc boinc       357 Mar 10 06:41 output.list
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc       620 Mar 10 06:41 runtime_log
[2026-03-10 07:04:06] -rw------- 1 boinc boinc   1290240 Mar 10 06:41 result.tar.gz
[2026-03-10 07:04:06] -rw------- 1 boinc boinc       663 Mar 10 06:41 VEVKDmX0CH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmuxCLDmgzTtXo.diag
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc      8879 Mar 10 06:41 runtime_log.err
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc        25 Mar 10 07:04 wrapper_checkpoint.txt
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc      8192 Mar 10 07:04 boinc_mmap_file
[2026-03-10 07:04:06] -rw-r--r-- 1 boinc boinc     21526 Mar 10 07:04 stderr.txt
[2026-03-10 07:04:06] HITS file was successfully produced:
[2026-03-10 07:04:06] -rw------- 1 boinc boinc 202817027 Mar 10 06:39 shared/HITS.pool.root.1
[2026-03-10 07:04:06]  *** Contents of shared directory: ***
[2026-03-10 07:04:06] total 465788
[2026-03-10 07:04:06] -rw-r--r-- 2 boinc boinc 272234660 Mar 10 04:56 ATLAS.root_0
[2026-03-10 07:04:06] -rw-r--r-- 2 boinc boinc     15845 Mar 10 04:56 start_atlas.sh
[2026-03-10 07:04:06] -rw-r--r-- 2 boinc boinc    597968 Mar 10 04:56 input.tar.gz
[2026-03-10 07:04:06] -rw------- 1 boinc boinc 202817027 Mar 10 06:39 HITS.pool.root.1
[2026-03-10 07:04:06] -rw------- 1 boinc boinc   1290240 Mar 10 06:41 result.tar.gz
07:04:08 (1705887): run_atlas exited; CPU time 45698.441510
07:04:08 (1705887): called boinc_finish(0)

</stderr_txt>
]]>

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