Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:22:33 (884957): wrapper (7.7.26015): starting
20:22:33 (884957): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 20:22:33] Arguments: --nthreads 4
[2026-03-10 20:22:33] Threads: 4
[2026-03-10 20:22:33] Checking for CVMFS
[2026-03-10 20:22:33] No cvmfs_config command found, will try listing directly
[2026-03-10 20:22:33] CVMFS is ok
[2026-03-10 20:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 20:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 20:22:33] Further information can be found at the LHC@home message board.
[2026-03-10 20:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 20:22:33] Checking for apptainer binary...
[2026-03-10 20:22:33] which: no apptainer in ((null))
[2026-03-10 20:22:33] apptainer is not installed, using version from CVMFS
[2026-03-10 20:22:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 20:22:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-10 20:22:33] apptainer works
[2026-03-10 20:22:33] Set ATHENA_PROC_NUMBER=4
[2026-03-10 20:22:33] Set ATHENA_CORE_NUMBER=4
[2026-03-10 20:22:33] Starting ATLAS job with PandaID=7041087325
[2026-03-10 20:22:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 21:45:26]  *** The last 200 lines of the pilot log: ***
[2026-03-10 21:45:26]  filetype=log
[2026-03-10 21:45:26]  guid=4a05ffec-5480-4a36-b3c8-a55e64d667ad
[2026-03-10 21:45:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-10 21:45:26]  is_altstaged=None
[2026-03-10 21:45:26]  is_tar=False
[2026-03-10 21:45:26]  lfn=log.48955015._009563.job.log.tgz.1
[2026-03-10 21:45:26]  mtime=0
[2026-03-10 21:45:26]  protocol_id=None
[2026-03-10 21:45:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-10 21:45:26]  replicas=None
[2026-03-10 21:45:26]  scope=mc23_13p6TeV
[2026-03-10 21:45:26]  status=None
[2026-03-10 21:45:26]  status_code=0
[2026-03-10 21:45:26]  storage_token=
[2026-03-10 21:45:26]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7041087325/log.48955015._009563.job.log.tgz.1
[2026-03-10 21:45:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/10/log.48955015._009563.job.log.tgz.1
[2026-03-10 21:45:26]  workdir=None
[2026-03-10 21:45:26] ]
[2026-03-10 21:45:26] 2026-03-10 20:44:36,390 | INFO     | transferring file log.48955015._009563.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7041087325/log.48955015._009563.job.log.tgz.1 to /var/lib/
[2026-03-10 21:45:26] 2026-03-10 20:44:36,390 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7041087325/log.48955015._009563.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-10 21:45:26] 2026-03-10 20:44:36,407 | INFO     | adding to output.list: log.48955015._009563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/10/log.48955015._009563.job.log.tg
[2026-03-10 21:45:26] 2026-03-10 20:44:36,408 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-10 21:45:26] 2026-03-10 20:44:36,408 | INFO     | summary of transferred files:
[2026-03-10 21:45:26] 2026-03-10 20:44:36,408 | INFO     |  -- lfn=log.48955015._009563.job.log.tgz.1, status_code=0, status=transferred
[2026-03-10 21:45:26] 2026-03-10 20:44:36,408 | INFO     | stage-out finished correctly
[2026-03-10 21:45:26] 2026-03-10 20:44:36,814 | INFO     | number of running child processes to parent process 895724: 1
[2026-03-10 21:45:26] 2026-03-10 20:44:36,814 | INFO     | maximum number of monitored processes: 6
[2026-03-10 21:45:26] 2026-03-10 20:44:36,904 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 21:45:26] 2026-03-10 20:44:37,901 | INFO     | job 7041087325 has state=finished
[2026-03-10 21:45:26] 2026-03-10 20:44:37,901 | INFO     | preparing for final server update for job 7041087325 in state='finished'
[2026-03-10 21:45:26] 2026-03-10 20:44:37,901 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7041087325/jobReport.json
[2026-03-10 21:45:26] 2026-03-10 20:44:37,903 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-10 21:45:26] 2026-03-10 20:44:37,903 | INFO     | this job has now completed (state=finished)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,903 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,903 | INFO     | log transfer has been attempted: DONE
[2026-03-10 21:45:26] 2026-03-10 20:44:37,903 | INFO     | job 7041087325 has finished - writing final server update
[2026-03-10 21:45:26] 2026-03-10 20:44:37,904 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2513408/.job.ad'
[2026-03-10 21:45:26] 2026-03-10 20:44:37,904 | INFO     | total number of processed events: 400 (read)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,921 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7041087325/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,922 | INFO     | extracted standard info from prmon json
[2026-03-10 21:45:26] 2026-03-10 20:44:37,922 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 21:45:26] 2026-03-10 20:44:37,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 21:45:26] 2026-03-10 20:44:37,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 21:45:26] 2026-03-10 20:44:37,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 21:45:26] 2026-03-10 20:44:37,923 | INFO     | fitting pss+swap vs Time
[2026-03-10 21:45:26] 2026-03-10 20:44:37,923 | INFO     | sum of square deviations: 120605052.0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,923 | INFO     | sum of deviations: -981287846.0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,923 | INFO     | mean x: 1773173108.0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,923 | INFO     | mean y: 2338039.8493150687
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | intersect: 14429538151.95113
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | chi2: 0.000641436202343787
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | current memory leak: -8.14 B/s (using 73 data points, chi2=0.00)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | could have reported an average CPU frequency of 3574 MHz (6 samples)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | ..............................
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . Timing measurements:
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . get job = 0 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . initial setup = 6 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . payload setup = 6 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . stage-in = 0 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . payload execution = 4870 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . stage-out = 0 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | . log creation = 0 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,924 | INFO     | ..............................
[2026-03-10 21:45:26] 2026-03-10 20:44:37,973 | INFO     | 
[2026-03-10 21:45:26] 2026-03-10 20:44:37,973 | INFO     | job summary report
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | --------------------------------------------------
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | PanDA job id: 7041087325
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | task id: 48955015
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | errors: (none)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | pilot state: finished 
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | transexitcode: 0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | exeerrorcode: 0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | exeerrordiag: 
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | exitcode: 0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | exitmsg: OK
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | cpuconsumptiontime: 18589 s
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | nevents: 400
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | neventsw: 0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | pid: 895724
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | pgrp: 895724
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | corecount: 4
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | event service: False
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | sizes: {0: 2279753, 1: 2280270, 11: 2280270, 4880: 2306579, 4881: 2315601, 4882: 2315657, 4883: 2315979}
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | --------------------------------------------------
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | 
[2026-03-10 21:45:26] 2026-03-10 20:44:37,974 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-10 21:45:26] 2026-03-10 20:44:37,979 | INFO     | time since job start (4893s) is within the limit (349056.0s)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,994 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,994 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | job 7041087325 has completed (purged errors)
[2026-03-10 21:45:26] 2026-03-10 20:44:37,995 | INFO     | overall cleanup function is called
[2026-03-10 21:45:26] 2026-03-10 20:44:39,001 | INFO     | --- collectZombieJob: --- 10, [895724]
[2026-03-10 21:45:26] 2026-03-10 20:44:39,002 | INFO     | zombie collector waiting for pid 895724
[2026-03-10 21:45:26] 2026-03-10 20:44:39,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 21:45:26] 2026-03-10 20:44:39,002 | INFO     | collected zombie processes
[2026-03-10 21:45:26] 2026-03-10 20:44:39,002 | INFO     | will attempt to kill all subprocesses of pid=895724
[2026-03-10 21:45:26] 2026-03-10 20:44:39,473 | INFO     | process IDs to be killed: [895724] (in reverse order)
[2026-03-10 21:45:26] 2026-03-10 20:44:39,696 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 21:45:26] 2026-03-10 20:44:39,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 21:45:26] 2026-03-10 20:44:39,728 | INFO     | did not find any defunct processes belonging to 895724
[2026-03-10 21:45:26] 2026-03-10 20:44:39,759 | INFO     | did not find any defunct processes belonging to 895724
[2026-03-10 21:45:26] 2026-03-10 20:44:39,759 | INFO     | ready for new job
[2026-03-10 21:45:26] 2026-03-10 20:44:39,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 21:45:26] 2026-03-10 20:44:39,760 | INFO     | **************************************
[2026-03-10 21:45:26] 2026-03-10 20:44:39,760 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 21:45:26] 2026-03-10 20:44:39,760 | INFO     | **************************************
[2026-03-10 21:45:26] 2026-03-10 20:44:39,760 | INFO     | 
[2026-03-10 21:45:26] 2026-03-10 20:44:39,766 | INFO     | architecture information:
[2026-03-10 21:45:26] 2026-03-10 20:44:39,767 | INFO     | executing command: cat /etc/os-release
[2026-03-10 21:45:26] 2026-03-10 20:44:39,779 | INFO     | cat /etc/os-release:
[2026-03-10 21:45:26] NAME="CentOS Linux"
[2026-03-10 21:45:26] VERSION="7 (Core)"
[2026-03-10 21:45:26] ID="centos"
[2026-03-10 21:45:26] ID_LIKE="rhel fedora"
[2026-03-10 21:45:26] VERSION_ID="7"
[2026-03-10 21:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 21:45:26] ANSI_COLOR="0;31"
[2026-03-10 21:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 21:45:26] HOME_URL="https://www.centos.org/"
[2026-03-10 21:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 21:45:26] 
[2026-03-10 21:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 21:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 21:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 21:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 21:45:26] 
[2026-03-10 21:45:26] 2026-03-10 20:44:39,779 | INFO     | **************************************
[2026-03-10 21:45:26] 2026-03-10 20:44:40,282 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-10 21:45:26] 2026-03-10 20:44:40,298 | INFO     | sufficient remaining disk space (19728957440 B)
[2026-03-10 21:45:26] 2026-03-10 20:44:40,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 21:45:26] 2026-03-10 20:44:40,299 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 21:45:26] 2026-03-10 20:44:40,299 | INFO     | update_server=False
[2026-03-10 21:45:26] 2026-03-10 20:44:40,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 21:45:26] 2026-03-10 20:44:40,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 21:45:26] 2026-03-10 20:44:40,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:45:26] 2026-03-10 20:44:40,323 | INFO     | aborting loop
[2026-03-10 21:45:26] 2026-03-10 20:44:40,728 | INFO     | all data control threads have been joined
[2026-03-10 21:45:26] 2026-03-10 20:44:41,147 | INFO     | all job control threads have been joined
[2026-03-10 21:45:26] 2026-03-10 20:44:41,304 | INFO     | [job] retrieve thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,328 | INFO     | [job] job monitor thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,384 | INFO     | [job] validate thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,388 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,524 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,524 | INFO     | all payload control threads have been joined
[2026-03-10 21:45:26] 2026-03-10 20:44:41,605 | INFO     | [payload] validate_post thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,731 | INFO     | [data] control thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:41,896 | INFO     | [data] copytool_in thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:42,152 | INFO     | [job] control thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:42,305 | INFO     | [data] copytool_out thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:42,389 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:42,528 | INFO     | [payload] control thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:42,557 | INFO     | [payload] failed_post thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:42,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 21:45:26] 2026-03-10 20:44:42,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 21:45:26] 2026-03-10 20:44:43,987 | INFO     | [job] queue monitor thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:46,968 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:44:50,537 | INFO     | job.realtimelogging is not enabled
[2026-03-10 21:45:26] 2026-03-10 20:44:51,542 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 21:45:26] 2026-03-10 20:45:11,611 | INFO     | PID=889792 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-10 21:45:26] 2026-03-10 20:45:11,611 | INFO     | .. there are 41 such processes running
[2026-03-10 21:45:26] 2026-03-10 20:45:11,611 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 21:45:26] 2026-03-10 20:45:11,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 21:45:26] 2026-03-10 20:45:11,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 21:45:26] 2026-03-10 20:45:12,242 | INFO     | [monitor] cgroup control has ended
[2026-03-10 21:45:26] 2026-03-10 20:45:13,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22633797596992)>', '<ExcThread(monitor, started 22633560422144)>']
[2026-03-10 21:45:26] 2026-03-10 20:45:13,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 21:45:26] 2026-03-10 20:45:13,622 | INFO     | [monitor] control thread has ended
[2026-03-10 21:45:26] 2026-03-10 20:45:18,093 | INFO     | all workflow threads have been joined
[2026-03-10 21:45:26] 2026-03-10 20:45:18,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 21:45:26] 2026-03-10 20:45:18,098 | INFO     | traces error code: 0
[2026-03-10 21:45:26] 2026-03-10 20:45:18,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 21:45:26] 2026-03-10 20:45:18,271 [wrapper] ==== pilot stdout END ====
[2026-03-10 21:45:26] 2026-03-10 20:45:18,274 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 21:45:26] 2026-03-10 20:45:18,276 [wrapper] pilotpid: 889792
[2026-03-10 21:45:26] 2026-03-10 20:45:18,279 [wrapper] Pilot exit status: 0
[2026-03-10 21:45:26] 2026-03-10 20:45:18,287 [wrapper] pandaids: 7041087325
[2026-03-10 21:45:26] 2026-03-10 20:45:18,422 [wrapper] cleanup supervisor_pilot 1529287 889793
[2026-03-10 21:45:26] 2026-03-10 20:45:18,425 [wrapper] Test setup, not cleaning
[2026-03-10 21:45:26] 2026-03-10 20:45:18,428 [wrapper] apfmon messages muted
[2026-03-10 21:45:26] 2026-03-10 20:45:18,432 [wrapper] ==== wrapper stdout END ====
[2026-03-10 21:45:26] 2026-03-10 20:45:18,434 [wrapper] ==== wrapper stderr END ====
[2026-03-10 21:45:26]  *** Error codes and diagnostics ***
[2026-03-10 21:45:26]     "exeErrorCode": 0,
[2026-03-10 21:45:26]     "exeErrorDiag": "",
[2026-03-10 21:45:26]     "pilotErrorCode": 0,
[2026-03-10 21:45:26]     "pilotErrorDiag": "",
[2026-03-10 21:45:26]  *** Listing of results directory ***
[2026-03-10 21:45:26] total 618852
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc    584627 Mar  9 19:27 pilot3.tar.gz
[2026-03-10 21:45:26] -rwx------. 1 boinc boinc     36322 Mar  9 19:28 runpilot2-wrapper.sh
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc      5111 Mar  9 19:28 queuedata.json
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc       100 Mar 10 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 21:45:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 20:22 run_atlas
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc       105 Mar 10 20:22 job.xml
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc      6709 Mar 10 20:22 init_data.xml
[2026-03-10 21:45:26] -rw-r--r--. 2 boinc boinc 441090480 Mar 10 20:22 EVNT.46701403._002243.pool.root.1
[2026-03-10 21:45:26] -rw-r--r--. 2 boinc boinc     15845 Mar 10 20:22 start_atlas.sh
[2026-03-10 21:45:26] drwxrwx--x. 2 boinc boinc      4096 Mar 10 20:22 shared
[2026-03-10 21:45:26] -rw-r--r--. 2 boinc boinc    597959 Mar 10 20:22 input.tar.gz
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc         0 Mar 10 20:22 boinc_lockfile
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc      2568 Mar 10 20:22 pandaJob.out
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc   1006644 Mar 10 20:22 agis_schedconf.cvmfs.json
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc   1511578 Mar 10 20:22 agis_ddmendpoints.agis.ALL.json
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc       440 Mar 10 20:23 workernode_map.json
[2026-03-10 21:45:26] drwx------. 5 boinc boinc      4096 Mar 10 20:23 pilot3
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc 186747365 Mar 10 21:44 HITS.48955015._009563.pool.root.1
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc       529 Mar 10 21:44 boinc_task_state.xml
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc      1031 Mar 10 21:44 memory_monitor_summary.json
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc    251905 Mar 10 21:44 log.48955015._009563.job.log.tgz.1
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc      6348 Mar 10 21:44 heartbeat.json
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc        95 Mar 10 21:45 pilot_heartbeat.json
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc      4901 Mar 10 21:45 pilotlog.txt
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc    713335 Mar 10 21:45 log.48955015._009563.job.log.1
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc       357 Mar 10 21:45 output.list
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc       620 Mar 10 21:45 runtime_log
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc    983040 Mar 10 21:45 result.tar.gz
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc      9221 Mar 10 21:45 runtime_log.err
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc       661 Mar 10 21:45 IYtMDmSWuJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRRdLDmmVEDrm.diag
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc      8192 Mar 10 21:45 boinc_mmap_file
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc        26 Mar 10 21:45 wrapper_checkpoint.txt
[2026-03-10 21:45:26] -rw-r--r--. 1 boinc boinc     16465 Mar 10 21:45 stderr.txt
[2026-03-10 21:45:26] HITS file was successfully produced:
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc 186747365 Mar 10 21:44 shared/HITS.pool.root.1
[2026-03-10 21:45:26]  *** Contents of shared directory: ***
[2026-03-10 21:45:26] total 614696
[2026-03-10 21:45:26] -rw-r--r--. 2 boinc boinc 441090480 Mar 10 20:22 ATLAS.root_0
[2026-03-10 21:45:26] -rw-r--r--. 2 boinc boinc     15845 Mar 10 20:22 start_atlas.sh
[2026-03-10 21:45:26] -rw-r--r--. 2 boinc boinc    597959 Mar 10 20:22 input.tar.gz
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc 186747365 Mar 10 21:44 HITS.pool.root.1
[2026-03-10 21:45:26] -rw-------. 1 boinc boinc    983040 Mar 10 21:45 result.tar.gz
21:45:28 (884957): run_atlas exited; CPU time 18815.871551
21:45:28 (884957): called boinc_finish(0)

</stderr_txt>
]]>

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