Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:20 (2801032): wrapper (7.7.26015): starting
07:49:20 (2801032): wrapper: running run_atlas (--nthreads 3)
[2026-03-10 07:49:20] Arguments: --nthreads 3
[2026-03-10 07:49:20] Threads: 3
[2026-03-10 07:49:20] Checking for CVMFS
[2026-03-10 07:49:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 07:49:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 07:49:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 07:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 07:49:21] 2.9.2.0 85582 18186 89444 157105 1 50 24236959 36864000 0 130560 0 7200859 99.982 679885 13284 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-10 07:49:21] CVMFS is ok
[2026-03-10 07:49:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 07:49:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 07:49:21] Further information can be found at the LHC@home message board.
[2026-03-10 07:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 07:49:21] Checking for apptainer binary...
[2026-03-10 07:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 07:49:21] Running /usr/bin/apptainer --version
[2026-03-10 07:49:21] apptainer version 1.4.1-1.1
[2026-03-10 07:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 07:49:21] thA305
[2026-03-10 07:49:21] apptainer works
[2026-03-10 07:49:21] Set ATHENA_PROC_NUMBER=3
[2026-03-10 07:49:21] Set ATHENA_CORE_NUMBER=3
[2026-03-10 07:49:21] Starting ATLAS job with PandaID=7039300496
[2026-03-10 07:49:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 09:08:42]  *** The last 200 lines of the pilot log: ***
[2026-03-10 09:08:42] 2026-03-10 08:07:53,754 | INFO     | all data control threads have been joined
[2026-03-10 09:08:42] 2026-03-10 08:07:53,955 | INFO     | all payload control threads have been joined
[2026-03-10 09:08:42] 2026-03-10 08:07:54,061 | WARNING  | process 2809495 can no longer be monitored (due to stat problems) - aborting
[2026-03-10 09:08:42] 2026-03-10 08:07:54,064 | INFO     | all job control threads have been joined
[2026-03-10 09:08:42] 2026-03-10 08:07:54,095 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 09:08:42] 2026-03-10 08:07:54,138 | INFO     | number of running child processes to parent process 2809495: 1
[2026-03-10 09:08:42] 2026-03-10 08:07:54,138 | INFO     | maximum number of monitored processes: 6
[2026-03-10 09:08:42] 2026-03-10 08:07:54,138 | INFO     | aborting job monitoring since job object (job id=7039300496) has expired
[2026-03-10 09:08:42] 2026-03-10 08:07:54,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 09:08:42] 2026-03-10 08:07:54,138 | INFO     | will abort loop
[2026-03-10 09:08:42] 2026-03-10 08:07:54,706 | INFO     | [data] copytool_out thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:54,715 | INFO     | [payload] failed_post thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:54,759 | INFO     | [data] control thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:54,791 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:54,950 | INFO     | [job] validate thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:54,960 | INFO     | [payload] control thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,017 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,069 | INFO     | [job] control thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,115 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,144 | INFO     | [job] job monitor thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,184 | INFO     | [data] copytool_in thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,242 | INFO     | [payload] validate_post thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:07:55,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 09:08:42] 2026-03-10 08:07:59,632 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:08:03,037 | INFO     | job.realtimelogging is not enabled
[2026-03-10 09:08:42] 2026-03-10 08:08:04,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 09:08:42] 2026-03-10 08:08:23,409 | INFO     | PID=2805073 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 09:08:42] 2026-03-10 08:08:23,409 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 09:08:42] 2026-03-10 08:08:23,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 09:08:42] 2026-03-10 08:08:23,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 09:08:42] 2026-03-10 08:08:35,964 | INFO     | [monitor] cgroup control has ended
[2026-03-10 09:08:42] 2026-03-10 08:08:37,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947705050944)>', '<ExcThread(monitor, started 139947071760128)>']
[2026-03-10 09:08:42] 2026-03-10 08:08:38,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 09:08:42] 2026-03-10 08:08:38,480 | INFO     | [monitor] control thread has ended
[2026-03-10 09:08:42] 2026-03-10 08:08:42,733 | INFO     | all workflow threads have been joined
[2026-03-10 09:08:42] 2026-03-10 08:08:42,733 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 09:08:42] 2026-03-10 08:08:42,733 | INFO     | traces error code: 0
[2026-03-10 09:08:42] 2026-03-10 08:08:42,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 09:08:42] 2026-03-10 08:08:42,784 [wrapper] ==== pilot stdout END ====
[2026-03-10 09:08:42] 2026-03-10 08:08:42,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 09:08:42] 2026-03-10 08:08:42,789 [wrapper] pilotpid: 2805073
[2026-03-10 09:08:42] 2026-03-10 08:08:42,792 [wrapper] Pilot exit status: 0
[2026-03-10 09:08:42] 2026-03-10 08:08:42,799 [wrapper] pandaids: 7039300496
[2026-03-10 09:08:42] 2026-03-10 08:08:42,816 [wrapper] cleanup supervisor_pilot 2815598 2805074
[2026-03-10 09:08:42] 2026-03-10 08:08:42,819 [wrapper] Test setup, not cleaning
[2026-03-10 09:08:42] 2026-03-10 08:08:42,821 [wrapper] apfmon messages muted
[2026-03-10 09:08:42] 2026-03-10 08:08:42,823 [wrapper] ==== wrapper stdout END ====
[2026-03-10 09:08:42] 2026-03-10 08:08:42,826 [wrapper] ==== wrapper stderr END ====
[2026-03-10 09:08:42]  *** Error codes and diagnostics ***
[2026-03-10 09:08:42]     "exeErrorCode": 0,
[2026-03-10 09:08:42]     "exeErrorDiag": "",
[2026-03-10 09:08:42]     "pilotErrorCode": 0,
[2026-03-10 09:08:42]     "pilotErrorDiag": "",
[2026-03-10 09:08:42]  *** Listing of results directory ***
[2026-03-10 09:08:42] total 611188
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc      5111 Mar  7 23:32 queuedata.json
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc    584627 Mar  7 23:32 pilot3.tar.gz
[2026-03-10 09:08:42] -rwx------ 1 boinc boinc     36322 Mar  7 23:32 runpilot2-wrapper.sh
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc       100 Mar 10 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 09:08:42] -rwxr-xr-x 1 boinc boinc      7986 Mar 10 07:49 run_atlas
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc       105 Mar 10 07:49 job.xml
[2026-03-10 09:08:42] -rw-r--r-- 2 boinc boinc 435979722 Mar 10 07:49 EVNT.46701403._000422.pool.root.1
[2026-03-10 09:08:42] -rw-r--r-- 2 boinc boinc    597946 Mar 10 07:49 input.tar.gz
[2026-03-10 09:08:42] -rw-r--r-- 2 boinc boinc     15845 Mar 10 07:49 start_atlas.sh
[2026-03-10 09:08:42] drwxrwx--x 2 boinc boinc      4096 Mar 10 07:49 shared
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc         0 Mar 10 07:49 boinc_setup_complete
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc      6439 Mar 10 07:49 init_data.xml
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc         0 Mar 10 07:49 boinc_lockfile
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc      2562 Mar 10 07:49 pandaJob.out
[2026-03-10 09:08:42] -rw------- 1 boinc boinc   1005065 Mar 10 07:49 agis_schedconf.cvmfs.json
[2026-03-10 09:08:42] -rw------- 1 boinc boinc   1511578 Mar 10 07:49 agis_ddmendpoints.agis.ALL.json
[2026-03-10 09:08:42] -rw------- 1 boinc boinc       426 Mar 10 07:49 workernode_map.json
[2026-03-10 09:08:42] drwx------ 5 boinc boinc      4096 Mar 10 07:49 pilot3
[2026-03-10 09:08:42] -rw------- 1 boinc boinc 184087957 Mar 10 09:07 HITS.48955006._021057.pool.root.1
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc       530 Mar 10 09:07 boinc_task_state.xml
[2026-03-10 09:08:42] -rw------- 1 boinc boinc      1034 Mar 10 09:07 memory_monitor_summary.json
[2026-03-10 09:08:42] -rw------- 1 boinc boinc    238233 Mar 10 09:07 log.48955006._021057.job.log.tgz.1
[2026-03-10 09:08:42] -rw------- 1 boinc boinc      6311 Mar 10 09:07 heartbeat.json
[2026-03-10 09:08:42] -rw------- 1 boinc boinc        95 Mar 10 09:08 pilot_heartbeat.json
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc      8192 Mar 10 09:08 boinc_mmap_file
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc        27 Mar 10 09:08 wrapper_checkpoint.txt
[2026-03-10 09:08:42] -rw------- 1 boinc boinc      5344 Mar 10 09:08 pilotlog.txt
[2026-03-10 09:08:42] -rw------- 1 boinc boinc    691614 Mar 10 09:08 log.48955006._021057.job.log.1
[2026-03-10 09:08:42] -rw------- 1 boinc boinc       357 Mar 10 09:08 output.list
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc       620 Mar 10 09:08 runtime_log
[2026-03-10 09:08:42] -rw------- 1 boinc boinc    952320 Mar 10 09:08 result.tar.gz
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc      8896 Mar 10 09:08 runtime_log.err
[2026-03-10 09:08:42] -rw------- 1 boinc boinc       657 Mar 10 09:08 WCqLDm9MFJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvwULDmNGdg4m.diag
[2026-03-10 09:08:42] -rw-r--r-- 1 boinc boinc      7472 Mar 10 09:08 stderr.txt
[2026-03-10 09:08:42] HITS file was successfully produced:
[2026-03-10 09:08:42] -rw------- 1 boinc boinc 184087957 Mar 10 09:07 shared/HITS.pool.root.1
[2026-03-10 09:08:42]  *** Contents of shared directory: ***
[2026-03-10 09:08:42] total 607080
[2026-03-10 09:08:42] -rw-r--r-- 2 boinc boinc 435979722 Mar 10 07:49 ATLAS.root_0
[2026-03-10 09:08:42] -rw-r--r-- 2 boinc boinc    597946 Mar 10 07:49 input.tar.gz
[2026-03-10 09:08:42] -rw-r--r-- 2 boinc boinc     15845 Mar 10 07:49 start_atlas.sh
[2026-03-10 09:08:42] -rw------- 1 boinc boinc 184087957 Mar 10 09:07 HITS.pool.root.1
[2026-03-10 09:08:42] -rw------- 1 boinc boinc    952320 Mar 10 09:08 result.tar.gz
09:08:44 (2801032): run_atlas exited; CPU time 13404.508705
09:08:44 (2801032): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN